Yersinia ruckeri YRB: BD65_352
Help
Entry
BD65_352 CDS
T03611
Name
(GenBank) beta-eliminating lyase family protein
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru00350
Tyrosine metabolism
yru00360
Phenylalanine metabolism
yru00380
Tryptophan metabolism
yru01100
Metabolic pathways
yru01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
BD65_352
00360 Phenylalanine metabolism
BD65_352
00380 Tryptophan metabolism
BD65_352
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
yru04147
]
BD65_352
Enzymes [BR:
yru01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
BD65_352
4.1.1.105 L-tryptophan decarboxylase
BD65_352
Exosome [BR:
yru04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
BD65_352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
SepSecS
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AJI95590
LinkDB
All DBs
Position
complement(395635..397056)
Genome browser
AA seq
473 aa
AA seq
DB search
MTPDEFRRHGYAMIDLIADYRQNIEQRAVQPLTTPGEIKASLPANAPEKGEPFEDIISDV
EKLVMPGLLHWQHPNFFGYFPSNVELSSVLGDCLSTGLGVIGLSWQSSPALTEIEEVTTH
WLLKMIGLSDEWSGVIQDSASTSTLIALISARERTSDYVLMQEGILSSEAPLIVYTSPEA
HSAVNKAAMLAGFGLKNIRLIATDENHALSPLALELAIEQDLAQGNRPCIVIATTGTTAA
TVMDPIDAMGDICQRYGLWLHVDSAMAGSAMILPEFRYLWHGIEKADSVVLNPHKWLGAA
FDCSVYCVRDTEHLIRIMSTNPSFLQSNADGQVRNYRDWGIPLGRRFRALKLWFLIREQG
VEGLQARLRRDIAHAQWLAEQIEKHQDWQLVAPLTLQTLCVRHQPAGLSDDALDTYTRTW
AEKFNQSGKGYVTPATLSGRWMVRISIGTLGTERRHVEGLWSELQALVSEITI
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgactccagatgagtttcgtcgccatggctatgccatgatcgacctgatcgccgactat
cggcaaaatattgaacagcgggcggtgcaaccgctcaccacaccgggagaaatcaaggcg
agtttacccgccaacgcaccggaaaaaggtgaaccttttgaagatattatcagcgatgtt
gaaaaactggtgatgccgggtttgttacactggcagcatcctaattttttcggttacttt
ccttcgaacgtggaattgtcatcagtgctgggcgattgcttgagcaccggtctgggagtg
attggtttatcctggcaatccagtccggcgttgactgaaattgaagaagtaacaacccat
tggttgctgaaaatgattggcttgagtgatgagtggagtggggtcattcaggactctgcc
tcaacttccacgctgattgcgctgattagcgcccgcgaacgtacttcagattatgtgctg
atgcaggagggcatactgagcagcgaggcaccgctgatagtttacacctcgccagaggcc
catagtgcggtcaataaagccgccatgttagccggatttggtctgaaaaatatccgcttg
attgccactgatgaaaatcacgcactgtcgcctttggcgctggagctggcaattgagcaa
gatctggcgcaaggaaaccgaccttgtatcgtcattgccaccaccggcacgacagcagcc
acagtgatggatcccattgatgccatgggggatatctgccaacgctacggcttatggctg
catgttgattcagcaatggcgggttccgcgatgattctgccagagttccgttatttatgg
catgggatagaaaaggccgattcggtggtgcttaatccacataaatggttaggtgcagcc
tttgattgctcggtttattgcgtgcgtgatactgagcatctgattcgcattatgagcacc
aatcccagctttctacagtcaaatgccgatgggcaggtcagaaactatcgtgactggggg
attccactcgggcggcgtttccgcgcccttaagctgtggtttttaattcgcgagcaaggc
gtggaaggtttacaggcgcgtttgcgcagggatatcgctcatgctcagtggttggcagag
cagatcgaaaaacaccaagactggcagttggtcgcaccattgacactacaaacgctgtgc
gttcgccatcaacccgcagggctgtctgatgatgcattggatacttacacccgaacctgg
gcggaaaaatttaatcaatcggggaaagggtatgtcacgcccgcgacattatcgggccgt
tggatggtcagaatttcaattggaaccttgggcacggaacgtcgacatgtggaaggcctg
tggtctgaattacaggccttggtcagtgagataacgatatag
DBGET
integrated database retrieval system