Yersinia similis: BF17_00875
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Entry
BF17_00875 CDS
T03057
Name
(GenBank) RNA polymerase sigma factor RpoE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ysi
Yersinia similis
Brite
KEGG Orthology (KO) [BR:
ysi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ysi03021
]
BF17_00875
Transcription machinery [BR:
ysi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BF17_00875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_20
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AHK18076
UniProt:
A0A0T9QLD6
LinkDB
All DBs
Position
complement(119443..120018)
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AA seq
191 aa
AA seq
DB search
MSEQLTDQMLVERVQKGDQQSFNLLVIRYQHKVASLVSRYVPQGDVPDVVQESFIKAYRA
LESFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDANDAENYENAGALKEISNPEN
LMLSEELRQIVFKTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREA
IDNKVQPLIQR
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcagttaacggatcagatgctggttgaacgggtccagaaaggtgatcaacaa
tcgttcaatttactggtcattcgataccagcataaagttgcgagcctcgtatcccggtat
gtgcctcagggcgatgttcctgatgttgttcaggaatcttttattaaagcgtatcgcgca
ctggagtcatttcgtggtgatagcgctttttatacgtggctatatcgtattgctgttaat
acagcgaaaaattacttagtcgctcaggggcggcgcccgccatccagtgatgtggatgca
aatgatgctgaaaattatgaaaatgcgggtgcattgaaagaaatatcgaaccctgagaac
ttaatgttgtctgaagagttaaggcagatagtttttaaaaccatagagtcacttcctgaa
gatctccgaatggcgattacattaagggagctagatggtctaagctatgaagagatagca
gccattatggactgtccggtgggtactgttcgttcacgtatcttccgcgccagagaagct
attgataacaaagttcagccgctaattcagcgatag
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