Zobellella denitrificans: AN401_18790
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Entry
AN401_18790 CDS
T05100
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
zdf
Zobellella denitrificans
Pathway
zdf03420
Nucleotide excision repair
zdf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zdf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AN401_18790 (uvrD)
03430 Mismatch repair
AN401_18790 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zdf03400
]
AN401_18790 (uvrD)
Enzymes [BR:
zdf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AN401_18790 (uvrD)
DNA repair and recombination proteins [BR:
zdf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AN401_18790 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AN401_18790 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATG75644
UniProt:
A0A291HU24
LinkDB
All DBs
Position
complement(4032151..4034319)
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AA seq
722 aa
AA seq
DB search
MDVSSLLDGMNDKQREAVAAPSQNMLVLAGAGSGKTRVLVHRIAWLMQVEQVPASAILAV
TFTNKAAAEMRGRVEQLLGGRLFGLWLGTFHGLAHRLLRAHHLDANLPQDFQILDSDDQL
RLLRRVLKSLNLDEKQWPPRQAAGFINARKDEGLRPGDIQVLNDPLQKTYRQIYQVYQDT
CDRAGLVDFAELLLRAHELWLHKPHILQHYQDRFRHILVDEFQDTNSIQYAWLRMLAGDR
ARVMIVGDDDQSIYGWRGARVENIARFLADFPGAETVRLEQNYRSTGTILKAANTLIANN
AERMGKELWTEGAEGEPIAIYSAFNEVDEARFVVERIKQWRQQDGSLSETAILYRNNAQS
RVLEEALIQERLPYRIYGGLRFFERQEIKDALGYLRLINNRGDEASFERIVNTPTRGIGE
RTLGLIRDAARDRQQTLWQSAWALVEEKILTGRAASAVSRFLALINQLEDDTRELPLHLQ
TDRVIELSGLKAMYLAEKGEKAQSRVENLEELVSATRQFSPAEEDEMSPLSAFLSHAALE
AGEGQADQFDDAVQLMTLHSAKGLEFPLVFMVGLEEGMFPSQLSAEESRRLEEERRLAYV
GMTRAMHKLYISHAESRRLYGREMFHRPSRFIKELPADCLEEIRLKAKVTRALPNGRFSQ
DRVQETFDQTGFRLGQRVLHPKFGEGVVLNFEGAGAQSRVQVNFDDGGSKWLVTAYARLE
AV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatccagcctgcttgacggcatgaacgacaagcaacgcgaggcggtggccgcc
ccttcccagaacatgctggtgctggccggggctggcagcggcaagacccgggtgctggtg
catcgcatcgcctggctgatgcaggtggagcaggtgccggcctccgccatcctggcggtg
accttcaccaacaaggcggccgccgagatgcgcggccgggtggagcaactgctgggcggg
cggctgttcgggctctggctcggcaccttccacggcctggcccaccggctgctgcgcgcc
caccacctggacgccaacctgccccaggacttccagatcctcgactcggacgatcagctg
cggctgctgcgccgcgtcctcaagagcctgaacctggacgaaaaacagtggccgccgcgc
caggccgccggctttatcaacgcccgcaaggatgaaggcctgcgcccgggcgacatccag
gtgctcaacgatccgctgcagaagacctaccgccagatctaccaggtctatcaggacacc
tgcgaccgggccgggttggtggacttcgccgagctgctgctgcgcgcccacgaactgtgg
ctgcacaagccgcacatattgcagcactaccaggaccgcttccgccatatcctggtggac
gagttccaggacaccaacagcatccagtacgcctggctgcggatgctggccggcgaccgc
gcccgggtgatgatagtgggcgacgacgaccagtccatctacggctggcgcggggcgcgg
gtggagaacatcgcccgcttcctggccgactttcccggtgccgagaccgttcgcctggag
cagaactaccgctccaccggcaccatcctcaaggccgccaacaccctgatcgccaacaac
gccgagcgcatgggcaaggagctgtggaccgagggcgccgagggcgagcccatcgccatc
tacagcgccttcaacgaggtggacgaggctcgcttcgtggtggagcgcatcaagcagtgg
cgccagcaggacggaagcttaagcgaaaccgccatcctctaccgtaacaacgcccagtcg
cgggtgctggaagaggcgctgatccaggagcgcctgccttaccgcatctacggcggcctg
cgcttcttcgagcgccaggagatcaaggacgccctcggctacctgcgcctcatcaacaac
aggggcgacgaggcctccttcgagcgcatcgtcaacacccccacccgcggcatcggcgaa
cgcaccctggggttgatccgcgacgccgcccgggaccgccagcagaccctgtggcagtcg
gcctgggcgctggtggaggaaaaaatccttaccggccgggccgcctcggcggtgagccgc
ttcctggcgctgatcaaccagctggaggacgatacccgggagctgccgctgcacctgcag
accgaccgggtgatcgagctgtccgggctcaaggccatgtacctggcggaaaagggcgag
aaggcccagtcccgggtggagaacctggaggagctggtcagcgccacccgccagttcagt
ccggcggaggaggacgagatgtcgccgctgtcggcctttttgtcccacgcggcgctggag
gcgggcgagggccaggcggatcagttcgatgacgcggtgcagctgatgacgctgcactcg
gccaagggcctggagttcccgctggtgttcatggtggggctggaggagggcatgttcccc
agccagctgtcggcggaggagagccgccggctggaggaggagcgccggctggcctacgtg
ggcatgacccgggccatgcacaagctctatatcagccatgcggagagccgccgcctctac
ggccgggagatgttccaccggcccagccgctttatcaaggagctgcccgccgactgcctg
gaggagatccggctcaaggcgaaagtcacccgggccctgcccaacggccgcttcagccag
gaccgggtgcaggagaccttcgaccagaccggcttccgcctgggccagcgggtgctgcac
cccaagttcggcgagggggtggtgctcaacttcgagggcgccggtgcccagagccgggtg
caggtcaacttcgacgacggcggcagcaaatggctggtcaccgcctatgccaggctggaa
gcggtctga
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