Zobellella denitrificans: AN401_18810
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Entry
AN401_18810 CDS
T05100
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
zdf
Zobellella denitrificans
Pathway
zdf00300
Lysine biosynthesis
zdf00470
D-Amino acid metabolism
zdf01100
Metabolic pathways
zdf01110
Biosynthesis of secondary metabolites
zdf01120
Microbial metabolism in diverse environments
zdf01230
Biosynthesis of amino acids
Module
zdf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
zdf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AN401_18810 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AN401_18810 (dapF)
Enzymes [BR:
zdf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AN401_18810 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ATG76052
UniProt:
A0A291HV98
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Position
complement(4036742..4037551)
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AA seq
269 aa
AA seq
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MQGLGNDFMVVDGVTQKVFFNPEVIRQLADRHFGIGFDQLLLVEPPYDPELDFHYRIFNA
DGSEVEQCGNGARCFARFVRLKGLTNKDRINVSTQKGNIVLQLEKDNQVTVNMGVPDFEP
ANIPFKAQKAEKTYLIRTQDQTVLCGTVSMGNPHCVLEVDDIGTELVASLGPELESHERF
PARVNVGFMQVLNAREINLRVYERGAGETLACGTGACAAAVTGMSWGKLAERVQVHLPGG
SLTIAWKGPGKPVYMTGPAEHVFDGQINL
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggctcggcaacgactttatggtggtcgatggcgtcacccagaaggtgttcttc
aatcccgaggtgatccgccagctcgccgatcgccatttcggcatcggcttcgaccagctg
ctgctggtggagccaccctatgatcccgagctcgatttccactaccgcatcttcaatgcc
gacggctccgaggtggagcagtgcggcaacggcgcccgctgcttcgcccgtttcgtgcgg
ctcaaggggctgaccaacaaggacaggatcaacgtcagcacccagaagggcaacatagtg
ctgcagctggagaaggacaaccaggtcaccgtcaacatgggggtgcccgacttcgagccg
gccaatattccgttcaaggcccagaaggcggagaagacctacttgatccgcacccaggac
cagacggtgctgtgcggcaccgtgtccatgggcaacccccactgcgtgctggaagtggac
gacatcggcaccgagctggtggccagcctgggccccgagctggaaagccatgagcgcttc
ccggcccgggtcaacgtcggctttatgcaggtgctcaacgcccgggagatcaacctgcgg
gtgtacgagcgcggcgccggcgagaccctggcctgcggcaccggcgcctgcgcggcggcg
gtgaccggcatgagctggggcaaactggcggagcgggtgcaggtgcacctgcccggcggc
agcctcaccatcgcctggaagggaccgggcaagccggtgtacatgacgggcccggcggaa
cacgtcttcgacggacagatcaacctatga
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