Zobellella denitrificans: AN401_19035
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Entry
AN401_19035 CDS
T05100
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
zdf
Zobellella denitrificans
Brite
KEGG Orthology (KO) [BR:
zdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zdf03016
]
AN401_19035 (gidA)
03036 Chromosome and associated proteins [BR:
zdf03036
]
AN401_19035 (gidA)
Transfer RNA biogenesis [BR:
zdf03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
AN401_19035 (gidA)
Prokaryotic type
AN401_19035 (gidA)
Chromosome and associated proteins [BR:
zdf03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
AN401_19035 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
GIDA_C
FAD_oxidored
AlaDh_PNT_C
FAD_binding_2
Pyr_redox_2
HI0933_like
Thi4
Pyr_redox
HTH_IclR
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
ATG75684
UniProt:
A0A231N0R7
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Position
complement(4088069..4089958)
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AA seq
629 aa
AA seq
DB search
MQYEEWFDVIVVGGGHAGTEAAAAAARMGANTLLLTHNIDTLGQMSCNPAIGGIGKGHLV
KEIDALGGIMAQAADQAGIQFRTLNASKGPAVRATRAQADRQLYRQAVRTRLENQPNLKI
FQQACDDLLLDGDTVVGVVTQTGLRFHAKTVVLTVGTFLNGLIHIGMDNYRGGRAGDPPS
IALAQRLRELPLRIDRLKTGTPPRIDARSVDFSVMQPQPGDDPTPVFSFIGSRADHPRQV
PCYITHTNERTHEVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKIMRFADKASHQIFVEPE
GLTSTELYPNGISTSLPFDVQLAIVRSIRGFEQAHIVRPGYAIEYDYFDPRDLKTNMENK
CLHNLFFAGQINGTTGYEEAGAQGLLAGLNAALRAFGREAWSPRRDQAYLGVMMDDLSTL
GTREPYRMFTSRAEYRLLLREDNADLRLTEEGRRLGLVDDHRWALFSDKLERIEQETQRL
RETWITPKHAAAPALNEKLKTPLSREHNLEELLRRPELDYAGLMAVEGIGPGIEHEQAAE
QVEIQIKYAGYIERQKDEIEKQLRNEHTRLPLDLDYKEVPGLSNEVVVKLNQAKPETLGM
ASRISGVTPAAISILLVHLKKRGLLRKSA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatgaagaatggtttgacgtcattgtagtgggaggcggccacgccggcaccgaa
gccgccgccgccgccgctcgcatgggggcaaacaccctgttattgacccataacatcgat
accttgggacagatgtcctgcaatcctgccatcggtggcatcggcaagggccatttggtc
aaggagatcgatgccctgggcgggatcatggcccaggccgccgatcaggccgggatccag
ttccgtaccctcaacgcttccaagggaccggcggtgcgcgccacccgggcccaggcggat
cgtcagctgtaccgccaggcggtcaggacccggctggaaaaccagcccaacctgaagatc
ttccagcaggcctgcgacgatctgctgctcgacggcgataccgtggtgggcgtggtgacc
cagaccggactcaggttccatgccaaaaccgtggtgctgaccgtgggcaccttcctcaac
ggcctgatccatatcggcatggacaactaccggggtggccgcgccggggatcctccctcg
atcgccctcgcccaacggctgcgcgagctacccctgcggatcgaccggctcaagaccggc
accccgccacggatcgacgcccgcagcgtcgacttttcggtgatgcagccccagcccggc
gacgatcccaccccggtgttctcctttatcggcagccgggcggatcatccccggcaggtg
ccctgctacatcacccacaccaacgagcgtacccacgaggtgatccgcaacaacctggat
cgcagccccatgtacgccggggtgatcgaggggatcggcccccgttactgcccctcgatc
gaagacaagatcatgcgcttcgccgacaaggcctcgcaccagatcttcgtggagccggag
gggctgaccagcaccgagctctaccccaacggcatctccaccagcctgcccttcgacgtg
cagctggcgatcgtccgttcgatccgcggcttcgagcaggcccatatcgtccgtcccggc
tatgccatcgagtacgattacttcgatccccgggatctgaagaccaacatggaaaacaag
tgcctgcacaacctgttcttcgccggccagatcaacggcaccaccggttacgaggaagcc
ggcgcccagggcctgctggcgggccttaacgccgccctgcgcgccttcggcagggaagcc
tggtcgccgcgccgggatcaggcctatctgggcgtgatgatggacgacctgtccaccctg
ggcacccgcgagccctaccgcatgttcaccagccgggccgaataccggctgctgctgcgg
gaggacaacgccgatctgcgcctcaccgaggaaggccgccggctgggtctggtggatgat
caccgctgggccctgttcagcgacaagctggagcggatcgagcaggaaacccagcgcctg
cgggaaacctggatcacccccaaacacgcggccgcgccggccctgaatgaaaaactgaaa
accccactcagccgggagcacaacctcgaggagctgctgcgccggcccgaactggactac
gccggcctgatggcggtggagggcattggcccgggcatcgagcatgagcaggccgccgag
caggtggagatccagatcaagtacgccggttacatcgaacggcagaaggacgagatcgaa
aagcagctgcgcaacgagcacacccggctgccgctggatctggactacaaggaggtcccc
ggcctgtccaacgaggtggtggtcaagctcaaccaggccaaacccgaaaccctggggatg
gcatcgcgcatttccggggtgaccccggcggctatctccatcctgctggtgcacctgaaa
aagcgcggcctgctgcgcaagtcggcatga
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