KEGG   Ziziphus jujuba (Chinese jujube): 107419053Help
Entry
107419053         CDS       T04794                                 

Definition
(RefSeq) histone deacetylase 5-like
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:zju00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatase and associated proteins [BR:zju01009]
    107419053
  09182 Protein families: genetic information processing
   03019 Messenger RNA Biogenesis [BR:zju03019]
    107419053
   04131 Membrane trafficking [BR:zju04131]
    107419053
   03036 Chromosome and associated proteins [BR:zju03036]
    107419053
Enzymes [BR:zju01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     107419053
Protein phosphatases and associated proteins [BR:zju01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     107419053
Messenger RNA biogenesis [BR:zju03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     107419053
Membrane trafficking [BR:zju04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    107419053
Chromosome and associated proteins [BR:zju03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     107419053
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl
Motif
Other DBs
NCBI-GeneID: 107419053
NCBI-ProteinID: XP_015883261
LinkDB All DBs
Position
5
AA seq 737 aa AA seqDB search
MAHLRTHAQVRCFRQQRLLLMPCNSTCIALPCNTACALALVQAYPHTSMPRHACAILHVD
ACFGADLLLDDQKANINPPLRAINIILRQEPQAFRESIDVVYFVLEFSIFVGICLVAFEF
FSWVFKWVLVDFSFLRCVLFDAKEAEDKSILAVHSVNHVNLIKDISSNQYSEKARARIAS
MYNSIYFNEGSSEAAYLAAGSVIEVTEKVAKGELNSGVAIVRPPGHHAERDEAMGFCLFN
NVAVATSYLFNEKPELGINRVLIVDWDVHHGNATQKMFWEDPRVLFFSVHRHEFGSFYPA
TEDGYYTKVGKGPGAGYNINVPWENGLCGDADYLAVWDHILIPVAKEFNPDIIIISAGFD
AAIGDPLGGCRVTPYGYSVMLKKLLNFANGKIVLALEGGYNLESIANSMLACVKVLLEDN
PIPGSSEAYPFESTWRVIQAVRQELSPLWPVLVDELPKKLISQTAPTVPYYLSSSSDSDV
EENKGPDAVSENLEDVLRGVIEPLSKLKVGEDKMASNSMTWRSELSKIHIWYSSFGSNMW
RPRFMCYIQGGQVEGLQRPLPGCMDKSPPKGTLWKILPYRLFFGRNFSRSWGPGGVAFIN
PEVNIHEKTYMCLYRITLEQFNDVLLQENDPSVTLSSPLFDLTALNSIMTGTSKSQEINM
EKGWYRNVTYLGKAGDLPILTLTCRLSEVEGFRSGKIPLCPPGKSYTNILLRGLVEGKQL
SEEEAIAYIQEAATKPL
NT seq 2214 nt NT seq  +upstreamnt  +downstreamnt
atggcacatttgcgcacccatgcccaagtgaggtgcttcaggcagcaacgcctgctcctc
atgccatgcaacagcacctgcatagcacttccgtgcaacacagcgtgcgcccttgccctt
gtccaggcctacccgcacacatctatgccccggcatgcctgtgccatcctccatgttgat
gcttgttttggagctgatctcctccttgatgatcaaaaggccaatattaacccacctttg
agggctataaatatcatcttaaggcaagaaccccaggcctttcgggaaagtattgatgtg
gtttattttgttttagaattttcaatttttgtgggtatttgtttggttgcatttgaattt
ttcagttgggttttcaaatgggttttggtggatttttcgtttctcaggtgtgtcctgttt
gatgccaaagaagctgaagataaaagtattttggcagttcattccgtaaatcatgtgaac
ttgattaaggatataagctccaatcagtattccgaaaaagccagagccaggattgcgtct
atgtacaattccatatatttcaatgaaggatcatctgaagctgcatatcttgcagcaggt
tctgtaatagaggtaaccgaaaaggttgctaaaggtgaattaaattctggtgtcgctatt
gttaggcctccaggacatcatgctgaacgagatgaagcaatgggattttgtctattcaac
aatgtggctgttgcaaccagttacctgtttaatgaaaaaccagaattgggcattaaccgg
gttttaattgttgattgggatgttcaccatggaaatgctacacaaaagatgttttgggaa
gatcctcgtgttttattcttctctgttcataggcatgagtttgggagcttttatcctgct
actgaagatggttactatactaaggttggaaaaggaccgggtgcaggatataatataaat
gttccatgggagaatggtctgtgtggggatgcagactatcttgcagtttgggaccacatt
ttaattcctgttgccaaggaatttaatccagacattattataatctctgctggatttgat
gcagccattggtgatccccttggaggttgtcgtgttacaccatatggatactcagtaatg
ctgaagaagctgttgaattttgccaatggtaagattgtattggctttagaaggaggatac
aatctcgagtccatagcaaattcaatgcttgcttgtgttaaagttctcctagaagacaat
cctattcctggatcctctgaggcctatccatttgagtcaacatggcgagtaatacaagcg
gttcgccaggaattgagtcctttgtggcctgttcttgtagatgaactaccaaagaagttg
atcagtcaaacagcacctacagttccgtattatctgtcctcaagttctgattccgatgtg
gaggaaaacaaaggtccagatgctgtatctgaaaatcttgaagatgttcttcgtggtgtt
atagagcccctctcaaagttaaaagttggtgaagataaaatggcaagcaattccatgacc
tggagatcagagctttcaaagattcacatatggtatagcagttttggatcaaatatgtgg
agaccaagattcatgtgctatattcaaggtgggcaggtggaaggcttgcaaagaccatta
cctggctgcatggataaatctccaccgaaggggacactctggaagatattaccataccgc
ttgttctttggtcgaaacttttctcgttcatggggtcctggaggggtcgcttttattaat
cctgaagtcaacatccatgaaaaaacttacatgtgcctgtacagaattacgcttgagcag
ttcaatgatgttttgctgcaagaaaatgatcccagtgtcaccctcagttctcctttgttt
gatttgactgctttgaactcgatcatgactggaacgtccaagtcgcaggagattaacatg
gagaagggctggtaccgtaatgttacctacctgggaaaggctggtgatctccctatattg
actttaacgtgtagactttcggaagttgagggcttcagatctggaaagattcccttgtgt
cccccaggcaaaagttacacaaatatcttacttagaggtctggtagaaggaaaacagctt
tctgaagaggaggcaatcgcctatattcaagaagctgcaactaaaccattgtga

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