KEGG   Ziziphus jujuba (Chinese jujube): 107419757
Entry
107419757         CDS       T04794                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107419757
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zju03021]
    107419757
Enzymes [BR:zju01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     107419757
Transcription machinery [BR:zju03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     107419757
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 CFAP77
Other DBs
NCBI-GeneID: 107419757
NCBI-ProteinID: XP_015884035
UniProt: A0A6P4AE89
LinkDB
Position
5:complement(join(7295243..7295744,7295923..7296194,7296410..7297360,7298338..7298629,7298890..7299761,7300206..7300418,7301053..7301550))
AA seq 1199 aa
MGASSDAKEDIAMSSKGEKVYNGVDMDFDDDEDDDDEFIEPTGIEDLGEDMREDLKKFCK
EASIQFFNEYGLISHQINSYNYFISNGIQRVFDSFGEMIVEPGYDPSKKGENGWRFASVR
FGKVTLDKPTFWGGLGDGKELDMLPRHARLQNMTYASKIKVNTHIQVYSKKLVRSDKFKT
GKEQYVDREIITDENRDILIGRIPVMVKSDLCWMKGVEKGDCDFDHGGYFLIKGAEKTFI
AQEQICKKRLWISNNQPLQVAYQSELKRNRLIIRLASDASRGGEKVLTVYFLSTEIPVWI
LFFSLGISCDREVMDLIDYENPDASISNILFASIHDANENCEHFRGGKNALSFVDKRIKR
TTFPPGENIEQCIENYLFPNLKGLKQKARFLGYMVKCLLQAFSGRRKCNNRDDFKNKRLD
LGGELLERELKAHLSHARRRMAKALQRDLYADRTVHPIEHYLDASIITNGLSRAFSTGAW
CHPYKRMERISGVVATVGRANPLQTMIDMRRTRQQVQYTGKVGDARYPHPSHWGKVCFLS
TPDGENCGLVKNLATTGLVSTNVLKPILSEMYHCGMEKLVDDTFTKLTGKDKVFLNGEWV
GVCDDSLTFVMELRRERRRKKLPHQVEIKREGQHGEVHIYSDAGRILRPLLVVENLRKIK
SLKEGKYTFRCLLDKGIVELIGAEEEEDCRVAWDVKYLFMEDGGTSQIKYTHCELDMSFL
LGLSCGIVPFANHDHARRVLYQSQKHCQQAIGFSTTNPNIRVDTLSHQLHYPQKPLFRTM
TSDCLGKPRAPLGHKGFMPKPEFYNGQNAIVAVNVHLGYNQEDSIVMNRSSLERGMFRSE
HIRSYKAEVDNKESSDKRRKADDCINFGKLQSKIGRVDSLDDDGFPFVGANLQSGDIVIG
RCADSGADHSVKLKHTERGRVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKG
VLGFLEYQENFPFTVQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGLMKHATPFS
TLSVDDITAQLHRAGFSKWGNERVYSGCTGEMIRSLIFMGPTFYQRLVHMSEDKVKFRNT
GPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMYICQKCKN
VANVIQRALPGGRKIRGPYCRACESVDDIVKANVPYGAKLLCQELFSMGISLKFETQLC
NT seq 3600 nt   +upstreamnt  +downstreamnt
atgggggcgtcatcagatgcaaaggaagatattgccatgagtagtaagggagaaaaggtt
tataatggagttgatatggattttgatgatgatgaagatgatgatgatgaatttattgaa
cccactggcatagaggatctgggggaggatatgagggaagatctgaaaaaattttgcaag
gaggcatcaatacagttcttcaatgaatatggcctcattagtcaccagatcaactcctac
aattattttatcagtaatggtatacaaagggtctttgattcttttggtgaaatgatagtg
gagcctggatatgatccatcgaagaagggggaaaatgggtggcgatttgcttcagtgaga
tttgggaaagtgaccctcgataagccaactttttggggtggcttaggagatgggaaggag
ctggatatgctacctaggcatgctcggcttcagaacatgacttacgcatcgaagataaaa
gtgaacactcacatccaggtatatagtaaaaagcttgtaagaagtgacaagtttaaaacg
ggaaaagaacaatacgtagacagagagattatcactgacgaaaacagggacattttaatt
gggaggatccctgtgatggtgaagtctgacctctgttggatgaagggggttgagaaaggt
gactgtgattttgatcatggaggctactttttgatcaagggtgcagagaagacatttatt
gcacaggagcagatctgtaagaaaagactttggatctcaaataaccaacctcttcaagtc
gcttaccaatcggaactcaagaggaataggttaatcataaggttagccagtgacgctagt
agaggtggtgagaaggtgctgactgtatattttttgtctactgagatccctgtgtggatc
ttgttcttttctctaggcatttcatgtgatagagaggtcatggatctgattgattatgaa
aatcctgatgcaagtatatcaaatatacttttcgcatcaatccacgacgccaatgaaaac
tgcgaacactttcgtggaggaaagaatgctctcagctttgtagataaacggataaagaga
actacatttccacctggagaaaatattgaacaatgcattgaaaattacttgttccctaat
ctgaaaggtctaaagcagaaggctcgttttttgggttatatggtgaagtgtcttctgcag
gcttttagtggacgtagaaaatgtaacaatagagatgattttaagaataaaagattagac
ttaggtggtgagctgcttgagcgcgagttaaaggcgcatctttcacatgcccggaggcgt
atggcaaaggctttgcagagggatctttatgccgatcgaactgtccaccctattgaacat
tatctggatgcctctataatcaccaatggtctttctagagctttctcgacaggagcgtgg
tgtcatccatacaaacggatggaaaggatttcaggggttgtggcaacggttgggcgtgca
aatccattgcaaacgatgattgatatgagaagaacacgtcaacaggttcagtacactgga
aaggttggagatgctagatacccgcatccttctcactggggtaaggtttgctttctttct
acccccgatggtgaaaattgtggtctggtgaaaaatttggctaccacaggacttgtaagt
acaaatgtgttgaaacctatactttcagaaatgtatcattgcggtatggagaaattggta
gatgatacttttactaaacttactgggaaggataaagttttccttaatggggaatgggtt
ggagtttgtgatgattcactcacatttgttatggaattgaggagagagcgacgcagaaag
aagttgccacatcaggtggaaatcaaaagagaaggacagcatggagaagtacatatatat
tctgatgctggaaggattctgcgtcctcttttagtagttgagaatttgagaaagattaaa
tcattgaaagagggaaagtacaccttccgatgtcttctggacaagggaatagttgagctt
attggagctgaagaagaggaagactgtcgggtagcatgggatgtgaaatatcttttcatg
gaagatggggggacatctcaaataaagtatacacactgtgagcttgacatgtccttccta
ttaggattaagctgtggaatagtcccctttgctaatcatgaccatgcaaggagggttctt
tatcaatcccagaagcactgtcaacaagcaattgggttttctaccacaaatcccaatata
agagtggatacactgtctcatcagttacactacccacagaaaccactctttcggacaatg
acatctgattgtcttggaaaacctcgagctccattaggtcacaagggatttatgccaaag
cctgaattctataatggccagaatgctattgttgctgtcaacgttcacctcggctataac
caagaggattccatagtgatgaaccgctcttctttggagcgtggtatgtttcgatctgag
cacataaggagttacaaggctgaggttgacaacaaggaatcttcagataaaaggcgaaag
gctgatgattgtataaactttgggaagttacagagtaaaattggacgtgttgatagcctg
gacgatgatggttttccttttgttggggccaatttacagagtggggatatcgttattgga
aggtgtgctgattcaggggctgatcacagcgttaaattgaagcatacagagaggggaagg
gttcaaaaggttgtgctctcctccaacgatgatggaaaaaattttgctgtggtatctctg
agacaggttcgaagtccttgtcttggagacaagttctcaagcatgcacgggcaaaagggt
gttcttggctttttggagtatcaagagaatttcccctttacagtacaagggatagttcca
gatattgtcataaatccacatgcatttccatcacgacaaactcctggtcaacttttggag
gctgctctagggaaggggattgcccttggtggtttgatgaaacatgctacccctttctcc
actctgtctgttgatgatatcacagcccagcttcacagggctggattttctaaatgggga
aatgagagagtatacagtggctgtaccggtgaaatgatccgctctctcatatttatgggc
ccaacattctatcaacgtctggtccacatgtctgaagacaaagtaaaatttcggaatact
ggaccagtacaccctctaaccaggcagccagtggcagatagaaagcgctttggcggtgtc
aagtttggtgagatggagcgagactgccttcttgctcatggtgcatcggcaaacttgcat
gagcgcctgtttactctcagtgattcctctcagatgtacatttgccagaaatgcaaaaat
gttgctaatgtcatccaacgagcattgcccggtggccgtaagattaggggtccatattgt
cgggcatgcgagtctgtagatgacattgtcaaggccaatgtaccgtatggggctaagtta
ctgtgccaggagctttttagcatgggcatcagtctaaagttcgaaacccagctttgttga

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