KEGG   Ziziphus jujuba (Chinese jujube): 107428768
Entry
107428768         CDS       T04794                                 
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4 isoform X1
  KO
K11644  paired amphipathic helix protein Sin3a
Organism
zju  Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:zju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zju03036]
    107428768
Chromosome and associated proteins [BR:zju03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     107428768
    REST complex
     107428768
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    107428768
SSDB
Motif
Pfam: PAH Sin3a_C Sin3_corepress
Other DBs
NCBI-GeneID: 107428768
NCBI-ProteinID: XP_048318177
LinkDB
Position
12:complement(join(8337277..8337429,8337603..8337714,8337790..8337953,8338076..8338228,8338323..8338461,8338636..8338736,8338842..8339492,8340198..8340268,8340444..8341133,8341647..8341901,8342018..8342145,8342485..8342639,8342734..8343011,8343228..8343257,8343334..8343409,8343811..8343947,8344456..8344792,8344906..8345073,8345201..8345299,8345382..8345568,8345701..8345856,8346339..8346412))
AA seq 1437 aa
MKRSREDVYMGSQLKRPMVSSRGEASGQPQMTSAGGAQKLTTNDALAYLKAVKDIFQDKR
DKYEDFLEVMKDFKAQRIDTAGVIERVKDLFKGHRDLILGFNTFLPKGYEITLPLEDEQP
PQKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVATLFQDH
PDLLVEFTHFLPDTSATASTLYAPSGRNSLLRDRSSAMATMRQIHVDKKDRVMASHADRD
LSVDRPDPDHDRSAMRADKEQRKRGEKEKERREDRDRRDDRDFEHDGNRDSNMHRYPNKR
KSTRRVEDSSAEQLHQVGEGDENFGIRPISSSYDDKNSAKNVYGQEFAFCEKVKEKLRNP
DDYQEFLKCLHIYSKEIITRAELQSLVGDLLGRYPDLMDGFNEFLASCEKNDGFLAGVMS
KKSLWNEGHLSRPVKVEDRDRDRDRDRDDGIKDRDRENRERDRSDKGGAFGSKDTGAHKM
TIFPKDKYIAKPINELDLSNCERCTPSYRLLPKNYPIPSASQRTELGAEVLNDHWVSVTS
GSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKADSP
IRIEDHFTALNLRCIERLYGDHGLDVMDVLRKNAPLALPVILTRLKQKQEEWARCRSDFN
KVWAEIYSKNYHKSLDHRSFYFKQQDSKSSSTKALLAEIKEISEKKRKEDDVLLAIAAGN
RRPIIPNLEFEYPDHDIHEDLYQLIKYSCGEVCTTEQLDKVMKIWTTFLEPMLGVPSRPQ
GAEDTEDVVKAKIHSVKNAAASVGESDDSPGGGATVVNSKQLNPSRNGDENIPPEQSSSC
RTWPASGDNGVKEECSLDADRARKDDTSNAAQHGKVQVHSSVADEVSGVSKQDNSTDRLV
NSNALLATGIEQSNGKKNIDDTSGLNTASSRPGNGTVEGGLELPSSEGGDSTRPVISSNG
AITEGTKTQRYHEESVGHFKVEREEGELSPNGDFEEDNFANYGEAGLEAVHKAKDGSLNR
QYQSRHGEEEVCCGEAGGENDADADDEGEESAQRSSEDSENASENGDVSGSESGDAEECS
REEHEEDGDHDEHDTKAESEGEAEGMADAHDVEGDGTSLPLSERFLLTVKPLAKHVPPAL
HDKEKDSRVFYGNDSFYVLFRLHQTLYERIQSAKINSSSADRKWRGSNDTSPTDLYARFM
SALYNLLDGSSDNTKFEDDCRAIIGTQSYVLFTLDKLIYKLVKQLQTVAADEMDNKLLQL
YTYEKSRKPGRFVDIVYHENARVLLHDENIYRIECTSLPTHLSIQLMDYGHDKPEVTAVS
MDPNFSAYLHNDFLSVLPDKKEKSGIFLKRNKRRYASSDDLSTTCQAMEGLQVVNGLECK
IACNSSKVSYVLDTEDFLFRTKKKRRTLQRDSSCHSQARSSNGSNRVQRFQRLLSSS
NT seq 4314 nt   +upstreamnt  +downstreamnt
atgaaaaggtccagagaggacgtttacatgggctctcaactcaagcggcctatggtctct
tctcgaggagaagcctctgggcaaccccagatgacgagtgcaggtggtgctcagaaactt
acaacaaacgatgcccttgcatacctaaaagctgtgaaggacatatttcaagacaaaagg
gataaatatgaagactttcttgaagttatgaaagactttaaggctcaaagaattgacact
gcgggtgtgatagagagagtgaaggacttgttcaaaggacatcgtgacctaattttgggg
tttaataccttcttgccaaaaggatatgagattaccctaccacttgaggatgaacagccc
ccacaaaagaagcctgttgaatttgaagaggctataaattttgttaacaagattaagaca
cggtttcaaggtgatgatcacgtttataaatcttttttggatattttaaatatgtacaga
aaggaaaataagtccattactgaggtctaccaggaggttgcaactcttttccaagatcac
cctgatctgcttgtggagtttactcattttctaccagatacttctgcaactgctagcact
ctttatgctccatctggcaggaactctttgctccgtgataggagctctgctatggccacg
atgcggcaaatacatgttgacaagaaggatagggtcatggcttcacatgctgaccgtgac
cttagtgttgaccgtcctgatccagaccatgatagatctgcaatgagagcagacaaagag
caacggaagcgtggtgagaaggaaaaagagaggagagaagacagagatagaagagatgat
agagattttgagcacgatggcaatagagactccaacatgcatcgttatcccaacaaaagg
aaatctacacgtagggttgaagactcatctgctgaacaattacatcaagttggagaaggt
gatgaaaactttggaatacgtccaatttcatcctcatatgatgataaaaattctgcgaaa
aatgtttatgggcaagagtttgccttttgtgagaaggtgaaggagaagttacggaatcct
gatgattaccaggaatttttgaagtgcctccacatctacagcaaagaaatcataacacga
gctgaattacaatctttggttggtgatttgcttggaagatacccagacctcatggatggg
ttcaatgaatttttggcaagttgtgagaagaatgatgggttccttgctggtgtcatgagt
aaaaaatccttgtggaatgaagggcatttatctagaccagtgaaagtagaggacagggat
agagaccgagatcgtgatagggatgatggaattaaagacagagaccgtgaaaatcgagaa
agggatagaagtgacaaaggtggtgcctttggaagtaaagacactggggcccataagatg
actatatttcccaaggataagtatattgctaagccaattaatgaacttgacctttcaaac
tgtgagcgttgcactcctagctaccgtcttctgccaaagaattatccaataccttctgct
agccagagaacagagctcggtgctgaagtattaaatgatcactgggtgtctgttacttca
ggaagtgaggattattcttttaaacacatgcgcaaaaaccagtatgaagaaagtttgttt
cgatgtgaagatgacagatttgaacttgacatgttgttagagtctgtgaatgtaacaacc
aagcgtgtagaagagcttttagaaaagatcaataacaatacaatcaaagcagacagtcca
attcgtattgaagatcacttcacagctctaaatctgaggtgcattgaacgattatacggt
gatcatgggcttgatgtgatggatgtgttaaggaagaatgctcctcttgctttgcctgtt
atcttaacccgactgaagcaaaagcaagaagagtgggcaagatgccggtctgattttaat
aaagtttgggctgaaatatattcaaagaactatcacaagtcacttgatcatcgcagcttc
tattttaagcagcaggactcaaaaagctcaagcacaaaagccttattggcagagataaaa
gaaatcagtgagaagaagcgaaaagaagatgatgtccttctagctatcgctgcgggcaat
aggcgacctatcatccctaatttggaatttgagtatcctgatcatgacatccatgaagac
ctgtaccagcttattaaatattcgtgtggagaagtttgtacaactgaacagttggataaa
gtaatgaagatatggacaaccttcctggaacccatgctaggtgttccttctcgacctcag
ggcgcagaggatacggaagatgtagtcaaggcaaaaattcattccgtcaaaaatgctgct
gcaagtgtaggagagagtgatgacagtcctggtggtggtgctactgttgtgaattccaaa
cagttaaatccttccagaaatggagatgaaaatatcccaccagaacaatcaagttcttgc
aggacttggccagcaagtggagataatggtgttaaggaagaatgttctctagatgcagat
cgtgcacgtaaggatgatactagcaatgccgctcaacatggtaaagtgcaggttcattca
tctgtggctgatgaagtatcaggagtcagcaaacaagacaattccactgatcgattagtc
aattctaatgcattacttgccactggcattgagcaaagtaatggaaaaaaaaacatagat
gacacatcagggcttaacactgcatcttccagacctggtaatggcactgttgagggtggg
cttgagttaccttcatcagagggtggtgattctacaagacctgttatatcttcgaacggt
gctattactgaaggcaccaaaactcagagatatcatgaagaatctgttggacactttaaa
gttgaaagagaagagggtgaactatctcccaatggagattttgaggaggacaattttgca
aactatggggaagctggtttggaggctgtgcataaagctaaggatggttctctcaacaga
caatatcaatccagacatggagaagaggaagtgtgttgtggagaggcaggaggtgagaat
gatgctgatgctgatgatgaaggcgaggaaagtgctcagagatcatcagaggacagtgaa
aatgcttctgagaatggtgatgtttctggaagtgagtctggtgatgctgaggaatgttct
cgtgaagagcatgaggaagatggggatcatgatgagcatgacactaaagctgagagtgaa
ggcgaggctgaaggaatggcggatgcccacgatgttgagggtgacggaacatcattacca
ctttcagaacgttttctcctgactgtgaagcctcttgcgaagcatgttcctccagctttg
cacgacaaagaaaaggattcacgtgttttttatggaaatgattctttctatgtacttttc
aggcttcaccagacattatatgagagaatacaatcagccaagattaattcatcttctgct
gataggaagtggaggggttcaaatgatacaagccctactgatctctatgccagattcatg
agtgcactttacaatctacttgatggttcttctgataatacaaagtttgaggatgattgc
cgagctattattggaactcaatcgtacgttttatttacattagacaagctgatttataaa
cttgttaaacagctccaaacagttgcagctgatgagatggacaacaaactcctccagcta
tatacctatgaaaaatcgagaaaacctggaagatttgttgatatagtttatcacgaaaat
gcccgtgtcctccttcatgatgagaacatataccgtattgaatgtacatccttgccaacc
cacctgtccattcagcttatggactatgggcatgataagccagaagtgactgctgtttca
atggaccctaatttttcagcctatttgcataatgatttcctctcagttcttcctgacaaa
aaggagaaatctgggatcttcttgaagaggaacaaacgcagatatgccagtagtgacgat
ttgtccactacttgccaggccatggaaggacttcaagttgtcaatggtctggagtgtaag
atagcctgcaattcatccaaggtttcttacgttttagatacagaagactttttgtttcgg
acaaaaaagaaaaggaggactttgcagcgagacagctcgtgccacagccaagctaggtct
tcaaatggttctaacagagttcagcggtttcaaagattgctttctagctcataa

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