Zea mays (maize): 103634500
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Entry
103634500 CDS
T01088
Name
(RefSeq) transcription factor bHLH140
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
zma
Zea mays (maize)
Pathway
zma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103634500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zma03400
]
103634500
Enzymes [BR:
zma01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
103634500
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
103634500
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
103634500
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
103634500
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
103634500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
AAA_33
zf-C2HE
Macro
HIT
AAA_18
AAA_29
Zeta_toxin
ABC_tran
AAA
KTI12
nSTAND3
AAA_16
AAA_25
SMC_N
AAA_24
AAA_22
NB-ARC
AAA_5
NACHT
Motif
Other DBs
NCBI-GeneID:
103634500
NCBI-ProteinID:
XP_008654526
UniProt:
A0A1D6JZF1
LinkDB
All DBs
Position
1:45305496..45310698
Genome browser
AA seq
793 aa
AA seq
DB search
MDSDAGGSSSAPPPPSAAIGAGAGAGAETKGDERGRKQVMVVLVGPPGSGKSTFADAVVG
GSTAGRHWVRVCQDTIGNGKAGTKIQCLKAASDALKEGKSVLVDRCNLEREQRADFVKLG
GTLRADVHAVSLDLPAKVCISRAVSRKGHEGNLQGGKAALVVNRMLQKKETPLLTEGFSR
IMCCNDDGDIKKAVDLYNGLGPSDSLPSGVFGQKSKRPVQVGIMKFLKKTDASVVETSSG
PKQALTEIKPAQQNPLPKQENVEAGFACSMEVEKGLNDKMENEEHAKGSDYCDVGSRTLA
FPSISTADFQFDLDRASDIIVDTAANFLQKFDNIRLVLVDLSEKSRILSLVKQKAAKKSI
DSNRFFTYVGDITQLHTKGGLQCSVIGNAANWRLKPGGGGVNTAIYSAAGESLQHATKKC
ADALRPGTSVVVPLPSTSPLHQREGVTHVIHVLGPNMNPMRPDCLKNDYTRGSKILREAY
TSLFENFASIVQSYMGKQNNESGAEKSASGRISPNDTKMKREDNHESERMKKHKLFQPIM
TAKRQHECTKVNAPNCHDNAMTSSAAPSQTRQVDNKRNDVVTSKTWGSWAQSLYELAMNP
EKYKNSDSILETSDEYVVLKDLYPKAKRHVLVIARMDGLDSLADVKKEHLPLLRRMHSAG
VKWAHKFLEEDAALEFRLGYHSVPSMRQLHLHIISQDFNSASLKNKKHWNSFTTSFFRDS
VDVIEEIEQNGSTTTSSDEKVLAMELRCHRCRSAHPNIPKLKSHIAICKSPFPSHLLQKN
RLLLSSTMHMDRT
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggattctgacgcgggcggctccagctccgctccaccacctccgtcggcagccataggt
gcaggtgcaggcgcgggcgcggagacgaagggggatgagcgcggccgcaagcaggtgatg
gtggtactggtgggcccaccgggcagcggcaagtccacgtttgcagatgccgtggttggc
ggctccaccgccggccgccactgggttcgcgtctgccaggatacaatagggaacggcaaa
gctgggacaaaaatacagtgcttgaaggctgcatcagatgctttgaaggagggcaagagt
gttcttgtcgaccgctgcaacttggaacgtgagcagcgtgctgattttgtgaagctggga
ggcacattgcgcgcagatgtgcacgctgtctccctggatctacctgcaaaggtctgtatc
tcacgtgcagtgagccgaaagggccatgaaggaaatctgcagggtgggaaggctgccctt
gttgtgaaccgcatgctgcagaagaaggagacacccttgctcacagaaggtttcagtcgg
atcatgtgctgtaatgatgatggcgacattaaaaaagcagttgacttgtataatggttta
gggccttcagatagtcttccatcaggagtttttggtcagaagagcaaaagacccgtacaa
gttggtataatgaagtttctaaagaaaactgatgcttctgttgttgagacatctagcgga
cctaagcaggcattgacagaaataaagccagcgcagcaaaatcctttgccaaaacaggaa
aatgttgaagctggttttgcctgttccatggaagttgagaagggattaaatgacaagatg
gaaaatgaagagcatgctaaaggaagtgattattgtgatgttggttcccgtactctggca
tttccatctatttctacagctgacttccaatttgatcttgacagagcatctgatattata
gtggacacagctgctaatttcttgcagaagtttgataatataagactagttcttgtagac
ctgagtgagaaatcaagaattttgtcattggtcaaacagaaggctgctaagaagagcatc
gactccaacagatttttcacatacgtgggagatatcactcagttgcacacaaaaggaggt
cttcagtgcagcgtgattggtaatgctgccaattggaggctaaaacctggaggtggaggg
gttaatacagcaatatatagtgctgctggagaatctttacaacatgctactaaaaaatgt
gctgatgcactgaggccaggaacctctgtagttgttccacttccatcaacttctcctctg
catcaacgggaaggtgtgacgcatgtcatacatgtgctcgggccaaatatgaatccaatg
cgaccagactgtcttaagaatgactataccagagggtctaagattcttcgtgaagcatac
acttcactttttgagaattttgcatctattgtgcagagctacatgggaaagcagaacaat
gagtctggagcagaaaagtcagcgtctggaaggatatcgcccaatgacacaaaaatgaag
cgagaggacaaccatgaatctgaaaggatgaaaaaacataagttgtttcaacccatcatg
actgcaaagcgacagcatgagtgtacaaaggttaatgctccaaattgccatgataatgcc
atgacttcatctgctgctcctagccaaactagacaagtagacaacaaaaggaatgatgtg
gttaccagtaagacttggggatcctgggctcagtctctttacgaacttgccatgaaccca
gaaaaatacaagaactcagattctattctagagacatcagatgaatatgttgttctgaaa
gatctctatccaaaggccaaaaggcatgttttggtgatagctagaatggatggtcttgac
tctctagcagatgtcaagaaagaacacttgcctttgttgaggaggatgcattcagctggg
gtgaagtgggcacataagttcctagaggaagatgcggctttggaattcagacttggatac
cattcggttccatcaatgcgacaattgcatcttcacatcattagccaggatttcaactct
gcaagcttgaaaaataagaaacattggaactccttcaccacatcatttttccgtgattct
gttgatgtgattgaggagattgaacaaaatggatcaacaaccaccagcagtgatgaaaag
gtactcgctatggaactccggtgccacaggtgcaggagcgctcatccaaacatcccgaaa
ctgaaatcccacatcgccatctgtaaatctcccttcccttcacatcttcttcagaaaaac
aggctgttgttgtcctcgacgatgcatatggaccgcacgtag
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