KEGG   Zea mays (maize): 103634500
Entry
103634500         CDS       T01088                                 
Name
(RefSeq) transcription factor bHLH140
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
zma  Zea mays (maize)
Pathway
zma03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    103634500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zma03400]
    103634500
Enzymes [BR:zma01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     103634500
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     103634500
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     103634500
DNA repair and recombination proteins [BR:zma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     103634500
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     103634500
SSDB
Motif
Pfam: DcpS_C AAA_33 zf-C2HE Macro HIT AAA_18 AAA_29 Zeta_toxin ABC_tran AAA KTI12 nSTAND3 AAA_16 AAA_25 SMC_N AAA_24 AAA_22 NB-ARC AAA_5 NACHT
Other DBs
NCBI-GeneID: 103634500
NCBI-ProteinID: XP_008654526
UniProt: A0A1D6JZF1
LinkDB
Position
1:45305496..45310698
AA seq 793 aa
MDSDAGGSSSAPPPPSAAIGAGAGAGAETKGDERGRKQVMVVLVGPPGSGKSTFADAVVG
GSTAGRHWVRVCQDTIGNGKAGTKIQCLKAASDALKEGKSVLVDRCNLEREQRADFVKLG
GTLRADVHAVSLDLPAKVCISRAVSRKGHEGNLQGGKAALVVNRMLQKKETPLLTEGFSR
IMCCNDDGDIKKAVDLYNGLGPSDSLPSGVFGQKSKRPVQVGIMKFLKKTDASVVETSSG
PKQALTEIKPAQQNPLPKQENVEAGFACSMEVEKGLNDKMENEEHAKGSDYCDVGSRTLA
FPSISTADFQFDLDRASDIIVDTAANFLQKFDNIRLVLVDLSEKSRILSLVKQKAAKKSI
DSNRFFTYVGDITQLHTKGGLQCSVIGNAANWRLKPGGGGVNTAIYSAAGESLQHATKKC
ADALRPGTSVVVPLPSTSPLHQREGVTHVIHVLGPNMNPMRPDCLKNDYTRGSKILREAY
TSLFENFASIVQSYMGKQNNESGAEKSASGRISPNDTKMKREDNHESERMKKHKLFQPIM
TAKRQHECTKVNAPNCHDNAMTSSAAPSQTRQVDNKRNDVVTSKTWGSWAQSLYELAMNP
EKYKNSDSILETSDEYVVLKDLYPKAKRHVLVIARMDGLDSLADVKKEHLPLLRRMHSAG
VKWAHKFLEEDAALEFRLGYHSVPSMRQLHLHIISQDFNSASLKNKKHWNSFTTSFFRDS
VDVIEEIEQNGSTTTSSDEKVLAMELRCHRCRSAHPNIPKLKSHIAICKSPFPSHLLQKN
RLLLSSTMHMDRT
NT seq 2382 nt   +upstreamnt  +downstreamnt
atggattctgacgcgggcggctccagctccgctccaccacctccgtcggcagccataggt
gcaggtgcaggcgcgggcgcggagacgaagggggatgagcgcggccgcaagcaggtgatg
gtggtactggtgggcccaccgggcagcggcaagtccacgtttgcagatgccgtggttggc
ggctccaccgccggccgccactgggttcgcgtctgccaggatacaatagggaacggcaaa
gctgggacaaaaatacagtgcttgaaggctgcatcagatgctttgaaggagggcaagagt
gttcttgtcgaccgctgcaacttggaacgtgagcagcgtgctgattttgtgaagctggga
ggcacattgcgcgcagatgtgcacgctgtctccctggatctacctgcaaaggtctgtatc
tcacgtgcagtgagccgaaagggccatgaaggaaatctgcagggtgggaaggctgccctt
gttgtgaaccgcatgctgcagaagaaggagacacccttgctcacagaaggtttcagtcgg
atcatgtgctgtaatgatgatggcgacattaaaaaagcagttgacttgtataatggttta
gggccttcagatagtcttccatcaggagtttttggtcagaagagcaaaagacccgtacaa
gttggtataatgaagtttctaaagaaaactgatgcttctgttgttgagacatctagcgga
cctaagcaggcattgacagaaataaagccagcgcagcaaaatcctttgccaaaacaggaa
aatgttgaagctggttttgcctgttccatggaagttgagaagggattaaatgacaagatg
gaaaatgaagagcatgctaaaggaagtgattattgtgatgttggttcccgtactctggca
tttccatctatttctacagctgacttccaatttgatcttgacagagcatctgatattata
gtggacacagctgctaatttcttgcagaagtttgataatataagactagttcttgtagac
ctgagtgagaaatcaagaattttgtcattggtcaaacagaaggctgctaagaagagcatc
gactccaacagatttttcacatacgtgggagatatcactcagttgcacacaaaaggaggt
cttcagtgcagcgtgattggtaatgctgccaattggaggctaaaacctggaggtggaggg
gttaatacagcaatatatagtgctgctggagaatctttacaacatgctactaaaaaatgt
gctgatgcactgaggccaggaacctctgtagttgttccacttccatcaacttctcctctg
catcaacgggaaggtgtgacgcatgtcatacatgtgctcgggccaaatatgaatccaatg
cgaccagactgtcttaagaatgactataccagagggtctaagattcttcgtgaagcatac
acttcactttttgagaattttgcatctattgtgcagagctacatgggaaagcagaacaat
gagtctggagcagaaaagtcagcgtctggaaggatatcgcccaatgacacaaaaatgaag
cgagaggacaaccatgaatctgaaaggatgaaaaaacataagttgtttcaacccatcatg
actgcaaagcgacagcatgagtgtacaaaggttaatgctccaaattgccatgataatgcc
atgacttcatctgctgctcctagccaaactagacaagtagacaacaaaaggaatgatgtg
gttaccagtaagacttggggatcctgggctcagtctctttacgaacttgccatgaaccca
gaaaaatacaagaactcagattctattctagagacatcagatgaatatgttgttctgaaa
gatctctatccaaaggccaaaaggcatgttttggtgatagctagaatggatggtcttgac
tctctagcagatgtcaagaaagaacacttgcctttgttgaggaggatgcattcagctggg
gtgaagtgggcacataagttcctagaggaagatgcggctttggaattcagacttggatac
cattcggttccatcaatgcgacaattgcatcttcacatcattagccaggatttcaactct
gcaagcttgaaaaataagaaacattggaactccttcaccacatcatttttccgtgattct
gttgatgtgattgaggagattgaacaaaatggatcaacaaccaccagcagtgatgaaaag
gtactcgctatggaactccggtgccacaggtgcaggagcgctcatccaaacatcccgaaa
ctgaaatcccacatcgccatctgtaaatctcccttcccttcacatcttcttcagaaaaac
aggctgttgttgtcctcgacgatgcatatggaccgcacgtag

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