Zea mays (maize): 103638016
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Entry
103638016 CDS
T01088
Name
(RefSeq) pre-mRNA-processing-splicing factor 8A
Organism
zma
Zea mays (maize)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
103638016
NCBI-ProteinID:
XP_008659246
UniProt:
K7W637
LinkDB
All DBs
Position
9:17735371..17745534
Genome browser
AA seq
2363 aa
AA seq
DB search
MWNGAPPPPPPQMAAAPPPPGTTVPGAGQPPPPPPPAGAPLGGKPLTPAELEAQLVEKAR
KWHQLNSKRYGDKRKFGFVEAQKEDMPPEHVRKIIRDHGDMSSKKYRHDKRVYLGALKFV
PHAVYKLLENMPMPWEQVRHVKILYHITGAITFINEIPWVVEPIYLAQWGTMWIMMRREK
RDRRHFKRMRFPPFDDEEPPLDYADNLLDVEPLEAIQLELDEEEDAAVYEWFYDHKPLMK
TKLINGPSYRKWHLSLPIMATLYRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCIPGG
PKFEPLYRDMEKGDEDWNEFNDINKLIIRQPLRTEYRIAFPHLYNNRPRKVKLGIYHTPM
IMYIKTEDPDLPAFYYDPLINPITSTNKVDRRERKAAEEEDDEDFCLPEDVEPLLKQTEL
YTDTTAAGISLLFAPKPFNMRSGRTRRAEDIPLVSEWFKEHCPPAYPVKVRVSYQKLLKC
YVLNELHHRPPKAQKKKHLFRSLQATKFFQTTELDWAEAGLQVCKQGYNMLNLLIHRKNL
NYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANIQFRLGNVDAFQ
LADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPM
WRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDV
LDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNV
AHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAIYTTT
VHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAYDN
PHEALSRIKRHLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKR
HLFPNWVKPADSEPPPLLVYKWCQGINNLLDIWDTSDGQCVVMLQTKFEKFFEKIDLTLL
NRLLRLVLDHNIADYVTAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLDLLIL
GLTRASEIAGPPQMPNEFLTYADTKVETRHPIRLYSRYIDKVHILFRFTHEEARDLIQRY
LTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENS
FVSVYSKDNPNLLFSMSGFEVRILPKIRMTQEAFSNTKDGVWNLQNEQTKERTAIAFLRV
DDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVKCE
NKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSKQTDVGVTH
FRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQSQNRRLTLEDLEDSW
DRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRT
DVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNR
RFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMD
LCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAHRWQMSKPSLVSESKDVF
DQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGIDLAYNLH
SAFGNWFPGSKPLLQQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIF
SNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKR
LGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLP
FQACLKIEKFGDLILKATEPQMVLYNIYDDWLKSISSYTAFSRIVLILRALHVNNEKAKM
LLKPDKTIVTEPHHIWPSLNDEQWLKVECALRDLILSDYAKKNNVNTSALTQSEMRDIIL
GAEIAPPSQQRQQIAEIEKQSRETTQLTAVTTRTTNVHGDELIITTTSPYEQQAFASKTD
WRVRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKNILKKFICVADLRTQIAGFLYGLS
PQDNPQVKEIRCIAIPPQHGTHQMVTLPSNLPEHEFLNDLEPLGWMHTQPNEAPQLSPQD
LTSHAKILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRSNKDNGSNPHGYL
PTHYEKVQMLLSDRFLGFYMIPDNTPWNFNFMGVKHDPQMKYNMKLGMPRDFYHEDHRPT
HFLEFSNIEEGEVAEGDREDTFT
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacggcgcgccgcctccgccgccgccgcagatggcggcggccccgcctccccct
ggcacgacggtgcccggggcaggccaacctccgcccccgccgccgccggccggggcgccg
ttgggcggcaagccgctgacgccggccgagctcgaggctcagctggtggagaaggcccgc
aagtggcaccagctcaactccaaacgctacggcgacaagcgcaagttcgggttcgtcgag
gcacagaaggaggacatgcctcctgagcacgtccgcaaaatcatcagagaccacggagac
atgtcttccaagaagtacaggcatgacaagcgtgtttatcttggtgcactcaaatttgtg
ccccacgctgtgtacaaacttctagagaacatgccgatgccttgggagcaggttcgccat
gtgaaaatcttgtatcacatcactggggctatcacttttataaatgaaatcccatgggtt
gttgaaccaatatacctcgcacagtggggtacaatgtggattatgatgcggcgagagaaa
agggataggcggcattttaaacgaatgcgctttcctccatttgatgatgaggagccccca
ctggactatgctgataatttgttggatgttgaaccacttgaagctatacagttggagttg
gatgaggaggaagatgcagctgtctatgaatggttctatgatcacaaacctctaatgaag
acaaaacttataaatggtcccagttacaggaaatggcatctatctcttcccataatggca
acactatatcgccttgctggccagctgctgtcagatctgatcgataggaattatttctac
ttatttgatatggagtccttctttacagccaaggcccttaatatgtgcattccagggggt
ccaaagtttgagccattgtaccgtgatatggagaagggtgatgaggactggaatgagttt
aatgacataaataagctcatcatacgtcagccacttcgaactgagtacaggattgctttc
cctcacctgtacaacaacaggccaaggaaagtgaaacttggtatctatcatacccccatg
ataatgtacatcaagactgaagatccagacttgccagcgttctactatgatcctctgata
aatcctatcacttcaaccaacaaggttgatcgtcgggagaggaaagcagctgaagaggaa
gatgatgaagatttttgtctcccagaagatgtagagcctctcttgaaacagactgaactc
tacactgatacaacagctgctggtatatcgttactttttgctccaaagccttttaacatg
agatctggtcggacacgtcgtgcagaggatattcctcttgtatctgagtggttcaaggaa
cattgccctccagcttatcctgtgaaagttcgtgtgagttatcagaagctattgaagtgt
tatgtgctcaatgagctacatcataggcctcccaaggcccagaagaagaagcatctgttc
cgttcactccaagcaactaagttcttccaaactactgagcttgactgggcagaagcaggc
ttgcaagtttgcaagcaggggtacaacatgctaaatttgttgattcacaggaaaaatctt
aactatcttcatttagattacaatttcaatttgaagcctgtaaagactcttacaacaaag
gaaaggaagaaatctcgttttggaaatgcattccatttgtgtcgtgagattttacgactt
acaaagttggttgttgatgctaacatccagttccgtctgggaaatgttgatgccttccag
ttggcagatggtctgcaatacatattttctcatgttgggcagttaactggtatgtatagg
tacaagtaccgattgatgagacagattaggatgtgcaaagatctgaagcacttgatatat
tatcgtttcaacactggccctgttggtaaagggcctggttgtgggttttgggctccaatg
tggagagtgtggctcttcttccttcgaggtattgtcccactattggagcgctggttgggc
aatcttctggcacgtcagtttgagggccgtcattccaagggtgtggccaaaactgtaaca
aagcaacgtgttgagtctcactttgatttagaacttcgtgctgcagttatgcacgacgtc
ctagatgctatgccagaaggcatcaaacaaaacaaggctcgaactatattacaacatctt
agcgaggcatggcgatgctggaaggcaaatatcccatggaaagtccctggtctacctgtg
cctattgaaaacatgattcttcgttatgtgaaatccaaggcagattggtggacaaatgtt
gctcactacaatcgtgagcgtatcaggcgtggtgctacagttgacaaaactgtttgtcgg
aaaaatctaggaaggttaactcgtctgtggctgaaggcagagcaagagaggcaacacaat
tacctgaaagatgggccatatgttactcctgaagaagctgttgctatttatacaacaact
gttcattggctggaatcaagaaagttctccccaattcctttcccgccattgtcatacaag
catgacactaaacttcttatacttgctctagaaaggctgaaggagtcatacagcgtagca
gttagattgaaccaattgcaacgagaggagcttgggttgattgaacaagcttatgataat
ccacatgaagcactgtcaaggataaaaaggcatctccttactcagcgtgcttttaaagaa
gttggtatagaattcatggacttgtacagctacttgattccggtatatgaaattgaacct
cttgaaaagatcactgatgcataccttgaccagtacctgtggtacgagggggacaaacgg
cacctcttcccaaattgggttaagcctgctgattcagaaccaccacctcttcttgtttat
aaatggtgccagggtataaataatttactggatatatgggacacaagtgatggacagtgt
gttgtgatgctccagacaaaatttgagaagttctttgagaaaattgatctgactctgttg
aacaggcttctgcgcttggtcttggatcataacatagctgactatgtcactgcaaagaac
aatgtagtgttgtcttacaaggacatgagtcacacaaattcttatggtctcattcgaggg
cttcaatttgcatcttttgttgttcagtattatggccttgtgctggatctcctgattctt
ggtctaactcgtgcaagtgagattgctgggccacctcaaatgccaaatgagttccttaca
tatgctgacacaaaagttgagacaaggcatcccataagattatattctcggtatattgac
aaggtgcatatattgttccggttcacccatgaggaagcacgagatctaattcagcgttac
ttgacagaacatcctgatcctaacaatgagaacatggttggttacaataacaagaaatgt
tggcccagagatgcaagaatgaggcttatgaaacatgacgtgaatcttggaagaagtgtg
ttctgggatatgaagaaccgccttccaaggagcattacaactttagaatgggagaatagc
tttgtctctgtttacagcaaggacaatccaaacctgctttttagcatgtctggctttgaa
gtccggatactgccaaagatacggatgacccaggaggcattcagcaacacaaaagatgga
gtatggaatttgcagaatgaacagacaaaagaaagaacggcaattgccttcctgagggtt
gacgatgaacatatgaaagtgttcgagaaccgtgtccggcagattctaatgtcatcaggg
tcaacaacattcaccaagatagtcaataagtggaatacagctctcattggccttatgaca
tatttccgcgaagcaactgtccatacccaggagcttttggatttactggtcaaatgtgaa
aacaagatccagactcgtataaagattggcctgaattcaaagatgcctagtaggtttcct
ccagttatcttctatactcccaaggagattggaggtcttggaatgttatcaatgggccat
attcttataccgcagagtgatcttaggtatagcaaacagacagatgttggtgtaacacat
tttagaagtggtatgagccatgaagaggatcagcttattccaaacttgtatcgctacatc
cagccatgggagagcgagtttattgattcacagcgtgtttgggctgagtatgctttgaag
aggcaggaagcacaatcacagaacagacgattaactcttgaggatcttgaagattcatgg
gatagaggtatacctcgtatcaacactcttttccaaaaagaccgtcatacactagcctat
gacaaaggatggagagtgagaacagattttaagcaatatcaagtgctgaaacagaaccca
ttctggtggacacatcagcggcatgatgggaagctttggaatctaaataactacagaaca
gatgtcatccaagcacttggtggtgtagaaggcatcttggagcatactttatttaaaggg
acttacttccccacttgggagggtctgttttgggagaaggcatcaggtttcgaagagtca
atgaaatacaagaaactgacaaatgcacagcggtctggtctcaatcaaatccccaatcga
agatttaccctgtggtggtcaccaaccatcaatcgtgcaaatgtctatgttggtttccag
gtccagctagatcttacgggcatattcatgcatggtaaaatcccgacattgaagatttct
ctgatccagatcttccgtgcacatctgtggcagaagatccatgaaagtgttgttatggat
ctttgccaagttttagaccaggagttggatgcacttgagattgagactgtgcagaaggag
acaatacatcccaggaagagttacaagatgaacagttcctgtgctgatatccttctcttt
gctgctcatagatggcagatgtccaaaccaagcttagtttctgagtcgaaggatgtattt
gatcagaaagcaagtaacaagtattggattgatgtgcaactgcgttggggagactatgat
tcacatgacatagaacgttatacaagagccaagttcatggattacacaacagacaatatg
tccatatacccatcgccaactggtgtgatgattggaatcgatctagcgtataatttgcac
tctgcttttggcaactggtttcctggatcaaagccactacttcagcaggcaatgaacaag
atcatgaagtcaaatcctgctctgtatgtcctgagggagagaataaggaagggtctgcag
ttgtactcttctgaacccactgaaccatacctgtcttcacagaactatggagagatattc
agcaatcaaatcatatggttcgtggatgatacaaatgtgtatcgagtcactattcacaaa
acatttgagggtaacttgaccaccaaaccaattaatggtgctattttcattttcaatcca
agaacgggtcaactttttcttaaggttatccacacaagtgtatgggcggggcagaagcgt
cttgggcagctggccaagtggaaaaccgctgaggaggttgctgcattggttcgatctctt
cctgtagaagagcagccaaagcaaattattgtgacaaggaagggcatgttggatcccttg
gaggtccatctacttgacttccctaacattgttattaagggcagcgagctgcagcttcct
ttccaggcttgcttgaagattgagaagtttggtgatcttatactgaaggcaactgaacca
cagatggttctttataatatatatgatgattggttgaaaagtatatcatcatacacagca
ttctcccgcattgtgcttattctacgtgcacttcatgtgaataatgagaaggcaaagatg
ttgctcaaacctgacaaaacaattgttactgaaccacatcatatatggccatctctgaat
gatgaacagtggttgaaggttgagtgtgcactaagggacctcatcctttctgattatgca
aagaaaaacaatgttaatacttctgcactgacacaatctgaaatgcgagatatcattctt
ggagctgaaattgctccaccatcacagcagaggcaacagattgctgaaattgagaaacag
tcaagagagactactcagttaactgctgtaaccacaaggacgacgaatgtgcacggagat
gaactcattatcacaaccacaagtccatatgagcaacaagcattcgcatcgaagactgat
tggcgtgtcagagccatctctgccacaaacttgtatctacgtgtaaatcacatttatgtc
aattctgatgatataaaggaaactggctacacttacattatgccaaagaacatattgaag
aaattcatatgcgtagcagatctgcgtacacaaatcgctggattcttatatgggctgagt
ccacaggacaatcctcaagtcaaagagattaggtgtatagccatccctccgcagcatgga
acacaccagatggtgactctgccatcaaatcttcctgaacatgagttccttaatgatctt
gaacccttgggatggatgcatacacagccaaatgaagctccacagctatcaccacaggac
ctgacatcacatgccaagattctggagaacaacaaacaatgggatggtgagaagtgcatc
attctgacatgcagcttcaccccaggatcttgctcgttgactgcttacaagctgacacca
agtggttatgagtggggacgcagcaacaaggacaacggaagcaacccacatggatacctc
ccaactcattacgagaaggtccagatgcttctgagcgaccgcttccttggtttctacatg
attccggataacaccccttggaacttcaacttcatgggagtgaagcacgacccacagatg
aagtacaacatgaagctgggcatgccccgggacttctatcacgaggaccacaggccgaca
cacttccttgagttcagcaacatcgaggagggagaggtcgctgaaggtgatagggaggac
acattcacgtag
DBGET
integrated database retrieval system
