Zea mays (maize): 103641439
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Entry
103641439 CDS
T01088
Name
(RefSeq) zinc finger CCCH domain-containing protein 24 isoform X1
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zma03016
]
103641439
Transfer RNA biogenesis [BR:
zma03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
103641439
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
zf-CCCH
Ubie_methyltran
MTS
Methyltransf_4
Methyltransf_15
Methyltransf_11
PCMT
Methyltransf_32
RRM_1
PrmA
AviRa
Motif
Other DBs
NCBI-GeneID:
103641439
NCBI-ProteinID:
XP_008663005
UniProt:
A0A1D6J2T4
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Position
10:complement(97191499..97213728)
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AA seq
843 aa
AA seq
DB search
MEDVLTPPPQPELVGEKRKRDETSLDASIEDAPAAPASTGGAEDAAGSDVARHPMWKTSL
CSYFRRRGAGAEECSHGESCRYAHTEEELRPRPDGTWDPTSDRAKKLRKVAAEAQEEAEE
EVTVDEQSLEKCLVGLPMGWTADRLKPFLQDQGISYAIAKKKKGMTVGFVTFQSVEQLTN
AVQILKKNPSGGKEIKIVDANRRSHQKAHDGALVSNTGTTTENGSSPTTPAEETSVLESV
SSSKKGARDAVTPLANMTYIDQLEHKNQSMAQILKKLTRNARKACPPAIPHPDWVFKSKE
IGGLPCKFEGILESPVVNGYRNKCEFSVGYSLEGKKTVGFMLGNFREGVTAVEEPVNCPN
VSEISCKYAQMFQDFLQPSSFPLWSRIDNSGFWRQLTVREGRCPAEAVVSQNAESQISEV
MLIVQVCSTGVDEALMKEEFDKLSAILIQGAATCSPPLPLTTIVVQDHKGISNAAPTDCP
LIPLLVPKGDQLDGTTEDKIRIHDHISNLKFSLSPTAFFQVNTLAAERLYTLAGDWANLN
SDTLLFDVCCGTGTIGLTLAQHVGMVVGIEMNESAVSNACRNALVNGIKNCRFVCGKAED
VMGPLLTEYLGSPQQQAAASKSNSEIDDASKNEDTIGCASYDGENIDSSKQRNDNAEGQQ
PMGASVDHPTCASEVDENNVASGEQNCGEASLVNDKPIETASDNSLEQGKACKDGSSSPN
NNVLAANACQFKNVVAIVDSPRVGLRPTVIKALRTHPRIRRLVYVSCNPDSLVANAIELC
TPTSEKQEKNKGNRGWRSMSSAGLARQRTKSMPNSEPFIPKRAMAVDLFPHTPHCEMVML
FER
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgtcctgacaccgccgccgcagccggaactcgtcggagagaagcgtaagagg
gatgagacttcgctggatgcgtccattgaagacgctccagccgcccccgcctccaccggc
ggcgccgaggatgcggccggcagcgacgtcgcccggcacccgatgtggaagacgagcctg
tgctcctactttcgccgtcgcggcgccggcgccgaagagtgcagccacggggagtcctgc
cgttacgcgcacaccgaggaggagctccgcccgcgtcccgacggcacctgggaccccacc
tctgaccgcgccaagaagctgcgcaaggtcgccgcggaggcccaggaggaggccgaggag
gaggtcacggtggatgagcagtcacttgaaaagtgcctcgtcgggctccccatggggtgg
acggctgataggctcaagcccttcctccaggaccagggaatctcatatgcaatagcaaag
aaaaagaagggaatgacagttggttttgtgacttttcagagtgttgaacaactaacaaat
gctgttcagatccttaagaagaacccttctggtggaaaggaaataaagatagtagatgcc
aatcgtaggtctcatcaaaaagcacatgatggagcacttgtatccaatactggaaccaca
acagaaaatggtagcagtcctactacacctgcagaggaaacatctgtgcttgaatcggtg
tcatcaagtaaaaaaggtgcccgtgatgcagttactccccttgccaatatgacttacatt
gatcagctagaacacaaaaatcaatctatggcacagatactgaagaaacttactcgcaat
gctaggaaagcttgcccacctgccattccccatcctgattgggtttttaaatcaaaggaa
atcggtggtcttccttgcaagtttgaaggcattttggagtccccagttgttaatggatac
cgtaacaagtgtgagttctctgtaggatattccttagagggcaaaaagacagtaggattt
atgctcggaaatttcagggaaggtgtgactgctgttgaggaacctgtgaattgtccaaat
gtctcagaaatttcctgcaaatacgctcagatgttccaagattttcttcaaccatcaagt
ttccctttgtggagcaggattgacaactctgggttttggcgccaactcacagtccgtgaa
ggaagatgtccagctgaagctgttgtttcacagaatgcagaatcacaaatatcagaagtc
atgcttattgtgcaggtgtgttcaacaggtgttgatgaagctcttatgaaagaagagttt
gacaagctgtctgctatcctgatacaaggagcagcaacatgctcacctcccttgccactg
acaactattgtagtgcaagatcataaagggatatcaaatgctgcacctactgattgccca
ctgatcccactattggtaccaaagggagatcagttggatggcacaacagaagataaaata
agaatccatgatcacataagcaacttaaagttctctctatcaccaacagcttttttccag
gttaatactcttgctgcggaaaggttgtacacccttgctggtgattgggctaatctcaat
tcagacacattactttttgatgtgtgttgtgggactggaactattggcctgaccttagca
cagcatgttggaatggttgttgggattgaaatgaatgaatcggcagtttcaaatgcttgc
agaaatgcccttgtcaatggcataaaaaattgtcgttttgtctgtggtaaggctgaagat
gtgatggggccccttctcacagaatatcttggttcaccacagcagcaggctgcagcttct
aaaagtaattctgaaatcgatgatgcaagcaaaaatgaggatacaattggctgtgcaagt
tatgatggtgaaaatatagatagctcaaagcagagaaatgacaatgctgaaggtcagcag
cctatgggtgcgtcagttgatcatcctacctgtgcaagcgaggtggatgaaaacaatgtg
gcttctggtgaacagaattgtggggaagcatcattggttaatgataaacccattgagaca
gcatcagataatagtttggagcaaggcaaggcatgcaaggatggttcttccagtccaaac
aacaatgtccttgctgctaatgcatgccagtttaagaatgtcgttgctattgtagactct
ccacgtgttggccttcgccctactgtgatcaaggcattgaggacgcatccacgtattcga
cgtctagtgtacgtttcctgcaaccctgacagtctagtcgccaacgcgatcgagctttgc
acaccaacatccgagaaacaagagaagaacaagggcaaccgagggtggcggtctatgagc
agcgcggggcttgctcggcagaggacgaagtcgatgcccaactctgagccttttatcccc
aagagggcaatggctgtcgatctgttccctcacacgccgcattgcgagatggttatgctc
tttgagagatga
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