Zea mays (maize): 103651644
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Entry
103651644 CDS
T01088
Name
(RefSeq) pre-mRNA-processing protein 40A isoform X2
KO
K12821
pre-mRNA-processing factor 40
Organism
zma
Zea mays (maize)
Pathway
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103651644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zma03041
]
103651644
Spliceosome [BR:
zma03041
]
Complex A
U1 snRNP components
U1 related factors
103651644
Complex B
103651644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
Motif
Other DBs
NCBI-GeneID:
103651644
NCBI-ProteinID:
XP_008675546
UniProt:
A0A1D6NNQ8
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Position
3:233961805..234020937
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AA seq
991 aa
AA seq
DB search
MASNMQSSGLPQPPRPPMMGSSAQPQNLGPPMPMQFRPVMPSQHPPQFMPPAAQQFRPVG
EPMAGANVGMPGQMPHFPQPGQHLPHSNQVPPVSQGVPMVYQPARPMSSAPMQQQQQTAY
AGGHLPTMGAPMQPLTYTYQPTSIPPVAQPWSTGPGQSVHHVPPLVPSGHQPVSAPTTLP
PVNLSEPSSSDWQEHTAAEGKKYYYNKKTRQSSWEKPVELMTPLERADASTEWKEFTTPE
GRKYYFNKVTKQSKWTIPDELKVARELAENASNQQPDRESGIATSALVRSAAFEPSTAPA
NQSSSAVGIIASSAHDGSSNSVLSGPPLPHNVENTSSSIVGMQNGGSSTAVVPVAASTEV
PLVATDAGSSRNNDENSSLTTGADAEDGTSAEDLVEAKKTMPVAGKINVTPVEEKTSEEE
PVVYATKMEAKNAFKSLLESVNVESDWTWDQTMRVIINDKRYGALKTLGERKQAFNEYLN
QRKKFEAEEKRIKQRKARDDFLAMLEESKELTSSTRWSKAILMFEDDERFKAVERPRERE
DLFENYLVELHKKEKAKAAEEHKRYVAEYRAFLESCDFIKASTQWRKVQERLEDDERYSR
LEKFDRLDIFQEYIRHLEKEEEEQKRVQKDQVRRQERKNRDGFRKMLEEHVADGTLNART
RWRDYCAQIKDSQSYLAVASNTSGSTPKELFDDVIEELGKQYQEDKIQIKEVVKSGKIPM
TTSWTLEEFQTATLEDDALKGISTINIKLVYDDQLERLKEKEQKDAKKRQRLGENFSDLL
YSIKEISASSTWDDSKQLFEDSQEFRALDSETYARELFEECVVHLKERLKEKERLREEEK
AKREKEREEKEKKKEKERKEKERKEKERDHREEREKEKGKDRSRRDEMEFDGADLNTHGA
KDKKRDKDKEKKHKRRHHDTDDVSSERDDKDDAKKSRRHSSDRKKSRKHAHGSDSDSENR
HKRHKKDRDSSRRNGAHELEDGELGEDGEIY
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggccagtaatatgcagtcttctgggctgcctcagcctccaagacctcccatgatgggt
tctagcgctcagccacaaaatcttggaccaccaatgcctatgcagtttaggccagtgatg
ccttcgcagcatcctcctcagttcatgccaccagcagcacagcagttccgtcctgttggt
gagcctatggcgggggctaacgttggcatgccagggcaaatgccacattttccacaacct
gggcagcacttgcctcactcaaatcaagttccacctgtatcacaaggggttcccatggta
tatcagccagctagaccaatgtcatcagcacctatgcaacaacagcaacaaactgcgtat
gctgggggccatttgcccaccatgggtgctcctatgcaacccctgacctatacatatcaa
ccaacatcgatccctcctgtagcgcaaccctggagtacaggcccaggacagagtgtacat
catgtgcctcctctagtgccgtctgggcaccagccggtgtcagctccaacgactttgcct
cctgtcaacttgtctgaacctagctcttcagactggcaggaacacactgcagccgaggga
aaaaagtactactataataagaagacaaggcaatcaagttgggagaaaccagttgagttg
atgacacctttggagagggctgatgcctcaactgaatggaaagaatttactacaccagaa
ggacggaagtactatttcaacaaagtgaccaagcaatcaaaatggactattcctgacgag
ttaaaggttgcacgtgaattggcagagaacgcatcaaatcaacaacctgatcgagaatca
ggaatagctactagtgctcttgtcagatctgctgcctttgaaccttctactgcacctgct
aatcagtcgtcatctgctgttggtataattgcttccagcgcacatgatggatcatcaaac
tctgttctttctggtcctcccctgccgcacaatgtggagaatacttccagttctattgtt
ggcatgcaaaatggtggttcgagtactgctgttgttcctgttgcagcaagcacagaagtt
ccattagttgcaacagatgcagggtccagcagaaacaacgatgaaaattcatctctgacc
actggggctgacgcagaggatggtacatccgctgaagatttggtggaggccaaaaagacc
atgccagttgcagggaagattaatgtcactccagtggaggagaaaacaagtgaagaagaa
cctgtagtctatgccactaagatggaagcaaaaaatgcgttcaagtccctgcttgagtcg
gtaaatgtggagtctgattggacatgggatcagactatgagagtcatcataaatgacaaa
agatatggtgctttgaaaactcttggagagagaaagcaagctttcaatgagtacttgaac
cagcgcaaaaagtttgaagccgaagaaaaacgtatcaaacagaggaaagcacgtgatgat
ttccttgcaatgttggaagaaagcaaggagcttacatcatcaacaagatggagcaaagca
atacttatgtttgaagatgatgaaagattcaaagcagttgagcgtccaagggagcgtgaa
gatttatttgagaactatcttgtggaactgcataagaaggaaaaagccaaggctgctgaa
gaacacaaaagatatgtagcagagtacagagcttttctagaatcatgtgacttcatcaag
gcaagcactcagtggagaaaagttcaggaacgcctggaggacgatgaacgttattcccga
cttgagaagtttgatcggttggatatttttcaagagtacattcgacacctagagaaagaa
gaggaagagcagaagcgggtacaaaaggatcaagtgagaagacaagagaggaaaaaccgt
gatgggtttcgtaaaatgttggaagaacatgttgctgatggcacacttaatgcaagaact
cggtggcgtgattactgtgcacagataaaagattcacagtcctacttggctgtagcatca
aacacatctggctctacaccgaaagagttatttgatgacgtgatcgaggaacttggcaaa
cagtatcaagaagacaagatccaaattaaagaagtggtgaaatctggaaagattcctatg
acaacttcatggacattagaggaattccaaactgctactctggaggatgatgctcttaaa
ggaatatcaaccatcaacatcaagcttgtatatgacgatcagcttgaaaggctcaaggaa
aaagagcaaaaggacgctaagaagcgccagcgcttgggtgaaaatttttcagatcttttg
tattccatcaaggaaatatcagcttcttcaacatgggatgattctaaacagcttttcgag
gatagccaagagttcagggccttggacagtgagacttatgctagagagctttttgaagag
tgcgttgtccacctgaaagaaaggttaaaagagaaagaacgtttgagggaggaagaaaag
gcaaaaagagagaaagagcgtgaggagaaagagaagaagaaagagaaagaaaggaaggag
aaagaacgcaaagaaaaagaaagagaccaccgggaggagagagaaaaggagaaagggaag
gatcgatcaaggagagatgaaatggagtttgatggtgctgatttgaacacccatggtgca
aaagataagaaaagagataaagataaagaaaagaaacataagagacgtcaccatgacaca
gatgatgtaagctctgagagggatgataaagacgatgctaagaagtctcggaggcatagc
agtgatcgcaagaaatctaggaagcatgcacatggctcagattcagatagtgaaaaccgg
cacaaaagacataaaaaggaccgagatagtagtagaagaaatggagcacatgagctggaa
gatggtgaacttggagaggatggggagatctattag
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