Zootermopsis nevadensis (dampwood termite): 110830960
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Entry
110830960 CDS
T05136
Name
(RefSeq) protein SMG5 isoform X1
KO
K11125
protein SMG5
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110830960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zne03019
]
110830960
03032 DNA replication proteins [BR:
zne03032
]
110830960
Messenger RNA biogenesis [BR:
zne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
110830960
mRNA cycle factors
Common to processing body (P body) and stress granule
110830960
DNA replication proteins [BR:
zne03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
110830960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
110830960
NCBI-ProteinID:
XP_021922098
LinkDB
All DBs
Position
Unknown
AA seq
1074 aa
AA seq
DB search
MKKSYNPISDVRNENVELSRRLYRAISDASRHLDDRRGRAQTCNDLFLPNVETQRVKLRE
YCERLIFSDPVGYGRKGEELLWRKGYYDVVTTAKRLRKNNTWSPQEVAHMQSHLAAGVGH
YHHLLFRLQIEFKLDLYGLVDFPLILYDEGLKKDKASSSSKALESNCVDWAKQAVHRCLV
YLGDLSRYFLDLHPHWDTGLAVRYYLQALNMNVDVGMPHNQLGTLSGTCNYGLDAAYYYM
RCLMCKQPFEGAEGNLERLLEKSTQWLEQHCDNQYQVEDALSVQPAERIHRLIARFLLLT
DVWFFDRKSLVESNQVCHQLLLDLQHCMALPKPFAGGSKCEMKGGQLDEEHLSLFQRSEE
NQERPEYLGDDLIFKMVVMSLLCITKLQTSGSQQASAVVGFILAMFSQLVQQVIHRIQDS
VFDISFPSFALPPTTTATSLELNLTALSPGDCNIKIPSDGMAVIRQPSDQSAACESTVAL
VNGRAGENDCQDTKAVMKKKISKRLQRLRSRRRRRRRLNSSEDSDLSDGDFPYGDGTSSS
DDGNSNISESTELDLDLSSDVEEDDDEEDEGDQSPKMLHINSDSSKVAVKRGKTLDQDAT
KDELNKCNGLKSGKKGDRNLASPLINTNGSVKDEGSCRDSVMISGGSLNNFEAVAIKEIN
AEDKDVDKNRMKNGQVLDPADAIEFVAGERLLHAIKVCADWLRGDGDAIRACGRESQTLL
SRFVTLLNLINVNADAFEKGSDVDQLFKLKNIAEIFRKVPLPEDVTLKGLSSLKTSHAAI
DWEYLRHHCLLVNEEALLRVYKLVDFGHFVASVPDTGVSYNSEQKLFAFVGETGRVPGEI
SKDKIKETATANVPDVNNAGTNDQSASASKPETSSRRGQLMHHMGQLWLRAEVRDLESRV
RHRGAAFSPYLAVDSDALIHHMHFVKQLVGAHKFIILIPSVVLSALDELKREVGKARETI
RWLESQFQRGNRFLRAQRSHERLPLPLIKYPKKKDKEAWLFFQVVECCHYFSQQTGVHER
HPEVALVTLLTGGGAKDEASKGFSFLGIATSAGINLEHIESFHAKWKTSSKSHG
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtcctacaatccgatttcggacgtaagaaacgagaacgtcgagttatcaaga
cgtctttacagagcaatatctgatgcctctagacatctggatgaccgtcgtggaagggcc
caaacatgcaatgacttgttcttgcctaatgtggagacccaacgggtgaagctgagagaa
tactgtgagcgcttgattttctcagatcctgtaggctatgggcggaagggagaagaactc
ctgtggaggaagggctactatgatgttgtcacaacagccaaaaggctcagaaagaacaac
acatggagccctcaggaagtagcacacatgcagagccatctagcagcaggagtgggacat
tatcatcatcttttgtttcggctacagattgaattcaagctggatctttatggacttgtt
gattttccattaatattgtatgatgagggattaaagaaagacaaagcgtcgtcatccagc
aaagcactggaaagtaactgtgtggattgggctaagcaggctgtgcaccgatgtttggtt
tatctgggtgatctgagtcgctacttcttagatctgcaccctcactgggatactgggcta
gctgtgcgctattatttgcaagcactgaatatgaatgtagatgttgggatgcctcacaac
caactgggcacgctatcagggacgtgtaattacgggctggatgcagcgtactattacatg
cgatgtttgatgtgtaagcagccatttgaaggtgcagaaggtaatttggaaaggttgctg
gagaaaagtacgcagtggttagaacagcactgtgacaaccagtaccaagttgaagatgcg
ttgtcagttcagcctgctgagcgcattcacagactgatagcaagattcctgctacttact
gacgtatggttctttgataggaagtcgctggttgagagtaatcaagtgtgccatcaactg
ttactagacctacagcactgcatggcacttccgaagccattcgcaggtggcagtaaatgt
gagatgaaaggagggcagttagatgaggaacatctgtcactctttcagagaagcgaggaa
aatcaagaaagaccagaatatctcggggatgatctcatcttcaaaatggttgtcatgtca
ctcctgtgtatcacaaaattgcagactagcggttcacaacaagcatctgctgtagttgga
ttcatattagccatgttttctcagttggtccagcaagtaatccatcgcattcaagattca
gttttcgatatatcatttccatcttttgctctccctccgaccactactgctacttcactt
gagcttaacttaactgccctctctcctggagactgcaacatcaagataccgtctgatgga
atggctgttattcggcagccgtcagatcagtccgctgcctgcgaaagtaccgtggctttg
gtaaacggacgtgctggggagaatgactgtcaagacactaaagccgtcatgaagaaaaag
atatctaaacggttgcaaaggctgaggagccgcagacgtaggaggagacgcttgaacagc
tctgaggattctgatttaagtgatggtgatttcccatatggtgatggcacttcgagttca
gacgacgggaattcaaatataagtgagagtacagaactagatctggacttgagctccgac
gttgaggaagatgatgatgaggaagacgagggcgatcaaagccccaaaatgctgcatatc
aattctgacagctccaaagtcgcagtgaagcgcggcaaaacacttgaccaagacgctact
aaagatgaattaaataaatgcaatgggttgaaatccgggaagaaaggcgacagaaatctc
gccagtccgctcataaataccaacggctcggttaaggatgaaggtagctgtcgcgatagt
gtgatgattagcggtggaagtttaaataattttgaagcagtagcaattaaagaaattaac
gctgaagacaaggacgtggataaaaacagaatgaagaatggtcaagtgctagatccagca
gatgcgattgagtttgttgctggagagaggcttctgcacgcaattaaagtgtgcgccgac
tggctccgcggagacggcgacgcaataagagcttgcggacgtgaatcccaaactcttctg
tccagatttgtaactctgttgaacctcatcaatgtgaatgcagatgcgtttgagaaagga
tcagatgttgaccagttgtttaaactgaaaaatattgcggagattttcaggaaagttccc
ttaccagaggatgtgacactgaaaggtctgtcgtcgttgaagacgagccatgccgctata
gattgggaataccttcgtcatcactgtctgcttgtgaatgaagaagccttactgcgtgtg
tacaaactggtggactttggccacttcgttgcttccgtcccggatacaggagtgagttac
aattcggagcagaagctgttcgccttcgtcggcgaaactggcagagtcccgggtgaaatc
tcaaaagacaagattaaagagactgctacagccaatgtgccggatgttaataatgctgga
accaacgatcagtcagcatctgcctcaaagccagaaacatcgtctcgccgagggcaattg
atgcatcacatgggtcaactgtggctccgtgcagaagtacgcgatttggagtctcgagtt
cgacatcgaggtgctgccttttcaccttaccttgctgttgatagtgatgccctcattcat
cacatgcactttgtgaaacagttggttggagcccacaaattcatcatcctcattccatct
gttgttctgtcagcactagacgagttgaagagagaggtcggaaaagctcgtgagacaatt
cgttggcttgaatctcagttccaaagaggtaaccgtttcctgcgagcccagcgatctcat
gagcgtcttcctctgcccctcatcaagtaccccaagaagaaggataaagaggcgtggctg
tttttccaagtggtagaatgctgccactatttcagccagcagaccggagtacatgagaga
catcctgaggtagccctggttacacttctgactgggggtggcgccaaagacgaagccagt
aaaggcttcagtttcttggggattgccacatcagcaggcatcaacttggagcatatagag
tcatttcacgctaaatggaaaacatcgagtaagagccatggctga
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integrated database retrieval system
