Zunongwangia profunda: ZPR_3314
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Entry
ZPR_3314 CDS
T01216
Name
(GenBank) RNA polymerase ECF-subfamily sigma factor
Organism
zpr
Zunongwangia profunda
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GFIT
Motif
Pfam:
DUF6596
Sigma70_r2
Sigma70_r4_2
TPR-S
TPR_19
Motif
Other DBs
NCBI-ProteinID:
ADF53630
UniProt:
D5BIZ7
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Position
3591677..3592879
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AA seq
400 aa
AA seq
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MSNPTAETNYRAIYGKLFSTLTRQFGIRYFSEIEDAIQNSFLKSVKNWKPNNTPKKKEDW
LYITAKNDLLNQLKRNNKTTDLEVYQTTSYSEPKTNDLRLETIFLVASSKNISQQAKIVF
VLKNIFGLNVREISENTLLGNEAIYKMVKRAKNSLQNEYKYRQISDIIKTIGKEEISTVE
EILYAVFNSGFDSFNEKQKSIVNEGLCLESFALAKILLNEYNRQSTSNLLSLFCFHIARI
EAKIINGNLISFFNQDREKWNSEMINIGFHYLKKPDKVGKFYIETLIVSKYMTTLSFTID
FWNDIIKLYKILLQISPSPIIEINYCFCLYKAERKEKAVKLLEKLERELTSEHVYLSLVK
ASFLSKENPKESEKITANIISKMNQDIRKKYVLETKFINL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatccaactgctgaaactaattaccgagcgatatacggtaagcttttttcgact
ctgactcgccaatttgggatacgatatttttcagaaatcgaagatgctatccaaaacagt
tttttaaaatcggtaaagaattggaagcccaataatacaccgaaaaagaaagaggattgg
ctctacataacggcaaagaacgatttgttgaaccagttaaaacgtaacaataaaacaact
gatttagaagtttatcaaacaacaagttattccgagccgaaaacaaatgatttgcgttta
gaaacaatatttcttgtcgcttcatcaaaaaatatttctcaacaagctaaaatagttttt
gtattaaaaaacatctttggactaaacgttcgggagatttctgaaaacacgttacttggc
aacgaagccatttacaaaatggtcaaaagggctaaaaattcgctccaaaacgaatacaaa
taccgacagatttcggacatcattaaaaccatcggaaaagaagaaatttctacagtcgaa
gagattttatatgctgttttcaattcgggtttcgattcgttcaacgaaaaacaaaaatca
atcgtaaacgaaggtttatgtttggaatcgttcgcccttgccaaaatcttgcttaacgaa
tacaaccgtcaatcaacgagcaatttattgtcgcttttttgttttcacattgccagaata
gaagctaaaataattaacggaaacttgatttcctttttcaatcaagaccgagaaaaatgg
aacagtgaaatgataaatatcggatttcattatttgaaaaagcccgacaaagtcggcaaa
ttctatattgaaactttgattgtgagcaagtatatgacaacactttcgttcaccatcgac
ttttggaacgacatcattaaactttacaaaatcctgttgcaaatttcgccttcgccaatc
atcgaaatcaattattgtttctgtctatacaaagctgaaagaaaggaaaaagccgtaaaa
ttattggaaaagttggaacgtgaactgacatccgaacacgtttacctatcgctcgtaaag
gcatcttttttaagtaaagaaaacccgaaagaatcagaaaagataactgcaaatattatc
tcaaaaatgaatcaggacatacgtaaaaagtatgttttggaaaccaaatttataaactta
taa
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