Entry
Name
anaerobic carbon monoxide dehydrogenase;
Ni-CODH;
carbon-monoxide dehydrogenase (ferredoxin)
Class
Oxidoreductases;
Acting on the aldehyde or oxo group of donors;
With an iron-sulfur protein as acceptor
BRITE hierarchy
Sysname
carbon-monoxide,water:ferredoxin oxidoreductase
Reaction(IUBMB)
CO + H2O + 2 oxidized ferredoxin = CO2 + 2 reduced ferredoxin + 2 H+ [RN:
R07157 ]
Reaction(KEGG)
Substrate
Product
Comment
This prokaryotic enzyme catalyses the reversible reduction of CO2 to CO. The electrons are transferred to redox proteins such as ferredoxin. In purple sulfur bacteria and methanogenic archaea it catalyses the oxidation of CO to CO2, which is incorporated by the Calvin-Benson-Basham cycle or released, respectively. In acetogenic and sulfate-reducing microbes it catalyses the reduction of CO2 to CO, which is incorporated into acetyl CoA by EC
2.3.1.169 , CO-methylating acetyl-CoA synthase, with which the enzyme forms a tight complex in those organisms. The enzyme contains five metal clusters per homodimeric enzyme: two nickel-iron-sulfur clusters called the C-Clusters, one [4Fe-4S] D-cluster; and two [4Fe-4S] B-clusters. In methanogenic archaea additional [4Fe-4S] clusters exist, presumably as part of the electron transfer chain. In purple sulfur bacteria the enzyme forms complexes with the Ni-Fe-S protein EC
1.12.7.2 , ferredoxin hydrogenase, which catalyse the overall reaction: CO + H2O = CO2 + H2. cf. EC
1.2.5.3 , aerobic carbon monoxide dehydrogenase.
History
EC 1.2.7.4 created 2003 (EC 1.2.99.2 created 1982, modified 1990, modified 2003, incorporated 2015), modified 2016
Pathway
ec00720 Other carbon fixation pathways
ec01120 Microbial metabolism in diverse environments
Orthology
K00192 anaerobic carbon-monoxide dehydrogenase, CODH/ACS complex subunit alpha
K00198 anaerobic carbon-monoxide dehydrogenase catalytic subunit
Genes
GPI : GPICK_01000 GPICK_11385
GBZ : JZM60_09735(cooS) JZM60_15465(cooS)
GEC : GEO60473_15420(cooS)
GEO : Geob_0362(cooS-1) Geob_1046(cooS-2)
GBM : Gbem_0072(cooS-2) Gbem_1736(cooS-1)
PCA : Pcar_0057(cooS-2) Pcar_0888(cooS-1)
DSB : LN040_10065(cooS) LN040_11210(cooS) LN040_11220
DPI : BN4_11760(cooS) BN4_20190(cooS)
DEJ : AWY79_01565 AWY79_06530 AWY79_06540
PPRF : DPRO_1606(cooS) DPRO_3530
PPOR : JCM14722_28790(cooS)
PBIZ : LWC08_02100(cooS) LWC08_04395(cooS)
DLM : DPPLL_25950(cooS_1) DPPLL_26600(cooS_2)
DAK : DaAHT2_0337 DaAHT2_0827
DBK : DGMP_17830(cooS_1) DGMP_17900(cooS_2)
DDU : GF1_01790(cooS_1) GF1_14190(cooS_2)
ECOM : QTN59_00690(cooS) QTN59_02735(cooS)
EAJ : Q3M24_13015(cooS) Q3M24_14560(cooS)
DAT : HRM2_16670(cdhA) HRM2_41010(cdh1) HRM2_43440(cdh2)
DTO : TOL2_C00990(cdh1) TOL2_C11820(cdhA) TOL2_C38110(cooS)
DOV : DSCO28_32360(cooS_1) DSCO28_36040(cooS_2) DSCO28_44770 DSCO28_59740(cooS_3)
DWD : DSCW_28520(cooS_1) DSCW_41580(cooS_2) DSCW_47510(cooS_3)
DALK : DSCA_26710(cooS_1) DSCA_27610(cooS_2) DSCA_28100(cooS_3)
DML : Dmul_09300(cooS1) Dmul_19100(cooS2) Dmul_30840(cdhA)
DLI : dnl_13210(cdhA) dnl_20660(cooS)
DMM : dnm_013300(cdhA1) dnm_058880(cooS) dnm_066390(cdhA2)
DEK : DSLASN_16750(cooS_1) DSLASN_29000(cooS_2) DSLASN_47710(cooS_3)
DAO : Desac_0166 Desac_1966 Desac_2050
DAX : FDQ92_02155(cooS) FDQ92_06245(cooS)
DMP : FAK_40980(cooS) FAK_42020(cooS)
TID : Thein_1422 Thein_2190
TAV : G4V39_00810(cooS) G4V39_01690(cooS)
CAE : SMB_G0117(cooS) SMB_G2533
CBJ : H04402_01401 H04402_02230
CBEI : LF65_03401 LF65_05731
CLJ : CLJU_c09110(cooS1) CLJU_c17910(cooS2) CLJU_c37670(codH)
CCB : Clocel_0365 Clocel_1516 Clocel_2587 Clocel_4231
CLB : Clo1100_1430 Clo1100_3687
CSR : Cspa_c16740(cooS1) Cspa_c21120(cooS2) Cspa_c57670(cooS3)
CPAS : Clopa_0057 Clopa_1484 Clopa_2128 Clopa_3232
CPAT : CLPA_c05080(cooS) CLPA_c34390(cooS1)
CPAE : CPAST_c05080(cooS) CPAST_c34390(cooS1)
CSB : CLSA_c11710(cooS1) CLSA_c14830(cooS2)
CAH : CAETHG_3005(cooS) CAETHG_3899(cooS)
CSQ : CSCA_1153 CSCA_1513 CSCA_3645 CSCA_4539
CLD : CLSPO_c13520(cooS1) CLSPO_c22620(cooS2)
CACE : CACET_c09110(acsA1) CACET_c10200(acsA2) CACET_c16200 CACET_c26140(acsA3)
CCK : Ccar_07140 Ccar_08590 Ccar_18845 Ccar_23090
CFM : BJL90_04040 BJL90_08730 BJL90_10555 BJL90_11075 BJL90_13810 BJL90_18885
CARG : RSJ17_07130 RSJ17_07755
CDRK : B9W14_01390 B9W14_11700 B9W14_13030 B9W14_22310
CDY : F3K33_15405(cooS) F3K33_25905(cooS)
CCOH : SAMEA4530647_0946(cooS1_1)
CLOS : DMR38_04285(cooS) DMR38_08960(cooS) DMR38_18780(cooS) DMR38_21405(cooS)
CMAH : C1I91_10775(cooS) C1I91_16460(cooS)
CRW : CROST_003140(cooS1) CROST_009140
CFB : CLFE_039580(cooS2) CLFE_045400(cooS1)
CAUN : CLAUR_020030(cooS2) CLAUR_026960(cooS1)
HHW : NCTC503_01567(cooS1)
CCL : Clocl_0520 Clocl_0806
RPAY : P0092_07465(cooS) P0092_19815(cooS)
RGV : NQ502_01510(cooS) NQ502_15320(cooS)
DSY : DSY1653 DSY2630 DSY4173 DSY4442
DHD : Dhaf_0882 Dhaf_1166 Dhaf_2798 Dhaf_3792
DDH : Desde_1134 Desde_2256 Desde_3264
DDL : Desdi_0655 Desdi_0934 Desdi_1922
DMT : DESME_03525 DESME_07325
DOR : Desor_0421 Desor_3274 Desor_4181 Desor_4446
DAI : Desaci_0260 Desaci_0709 Desaci_2975
DMI : Desmer_0456 Desmer_1790 Desmer_2536 Desmer_3209 Desmer_3478
DCA : Desca_0349 Desca_1148 Desca_1990
DRU : Desru_0859 Desru_3320
DAE : Dtox_1270 Dtox_2327 Dtox_2933 Dtox_3780
DKU : Desku_1492 Desku_2150 Desku_2787
FWA : DCMF_02985 DCMF_05870 DCMF_16840
AACX : DEACI_0147 DEACI_1162 DEACI_2511
TJR : TherJR_1157 TherJR_1937 TherJR_2144 TherJR_2959
DGI : Desgi_0522 Desgi_1185 Desgi_2052 Desgi_2753 Desgi_3080
HCV : FTV88_2859 FTV88_3326
AWO : Awo_c10740(acsA) Awo_c19050(cooS)
AWI : CHL1_001821(cooS) CHL1_002703(cooS)
ACAE : HYG86_07690(cooS) HYG86_14090(cooS)
CTHM : CFE_0163 CFE_0173 CFE_0653 CFE_1617 CFE_1666 CFE_1919
BYL : A4V09_05450 A4V09_05810
BHAN : CGC63_06525(cooS) CGC63_07980(cooS)
BPRO : PMF13cell1_00639(cooS1_1) PMF13cell1_04203(cooS) PMF13cell1_04285(cooS1_2)
BLAR : LC508_02755(cooS) LC508_03345(cooS) LC508_10485(cooS)
BLUI : Blut17040_19240(cooS)
BCOC : BLCOC_29830(cooS1_1) BLCOC_32200(cooS) BLCOC_33130(cooS1_2)
BHV : BLHYD_10750(cooS1_1) BLHYD_15380(cooS1_2) BLHYD_31740(cooS1_3)
LXA : OW255_01080(cooS) OW255_13590(cooS)
CBOL : CGC65_03955(cooS) CGC65_24000(cooS)
QDO : H9Q78_01480(cooS) H9Q78_02995(cooS)
WHJ : H9Q79_03145(cooS) H9Q79_03495(cooS)
AMIC : Ami3637_03990(cooS) Ami3637_14435
ABUT : Ami103574_08595(cooS) Ami103574_09485
AMT : Amet_1177 Amet_2016 Amet_3764
GFE : Gferi_05255 Gferi_06375 Gferi_11835 Gferi_24855
PBIF : KXZ80_13960(cooS) KXZ80_14960(cooS)
CDF : CD630_01740(cooS) CD630_07160(cooS1)
PDC : CDIF630_00296 CDIF630_00832(cooS)
CDC : CD196_0188 CD196_0661(cooS)
CDL : CDR20291_0175 CDR20291_0643(cooS)
PDF : CD630DERM_01740(cooS) CD630DERM_07160(cooS1)
RHOM : FRIFI_1555 FRIFI_2478 FRIFI_2658
PHX : KGNDJEFE_00543(cooS)
TEM : JW646_03340(cooS) JW646_10835(cooS) JW646_19155(cooS)
TGC : L0P85_04965(cooS) L0P85_16925(cooS)
TMY : TEMA_00050(cooS) TEMA_26170(acsA)
TPET : TPHSE_11890(cooS1) TPHSE_37400(acsA)
TEB : T8CH_0649(cooS) T8CH_1211(cooS) T8CH_3032(cooS)
IBR : NQ514_02295(cooS) NQ514_13145(cooS)
TKI : TKV_c08080(cooS) TKV_c20100(acsA)
CHY : CHY_0034(cooSV) CHY_0085(cooSII) CHY_0736(cooSIV) CHY_1824(cooSI)
TPZ : Tph_c05730(cooS1) Tph_c15180(acsB)
AAUT : ACETAC_02795(cooS) ACETAC_10650(cooS)
MTHO : MOTHE_c11790 MOTHE_c20130(cooS1)
MTHZ : MOTHA_c12660 MOTHA_c20910(cooS1)
DBC : MFMK1_000383(cooS) MFMK1_001371(cooS) MFMK1_002344(cooS) MFMK1_002513(cooS)
TOC : Toce_0335 Toce_0761 Toce_0800
NCD : ACONDI_00123(cooS2) ACONDI_01147(cooS1) ACONDI_02970
HALS : D7D81_07270(cooS) D7D81_07945(cooS)
IFN : GM661_04805(cooS) GM661_05400(cooS)
AAR : Acear_0983 Acear_1305
VRM : 44547418_00230(cooS2)
VDN : NCTC11831_00196(cooS1)
MANA : MAMMFC1_00477 MAMMFC1_00822(cooS) MAMMFC1_02734(cooS2)
STED : SPTER_01630 SPTER_04690(cooS2_1) SPTER_06840(cooS2_2) SPTER_13670
SSPH : SPSPH_008210(cooS1_1) SPSPH_010530(cooS1_2) SPSPH_013870
SOVA : SOV_14240 SOV_30560(cooS2)
SSID : SPSIL_019310 SPSIL_033400(cooS1) SPSIL_054700(cooS2)
CALK : HUE98_10145(cooS) HUE98_15625(cooS) HUE98_15635(cooS)
KST : KSMBR1_1326(cdh_acsA) KSMBR1_3765(acsA_2)
TAZ : TREAZ_1535(cooS_2) TREAZ_1650(cooS_1)
DTE : Dester_0417 Dester_0833
MVU : Metvu_0628 Metvu_1187
MFS : MFS40622_0120 MFS40622_1444
MJH : JH146_0004 JH146_1155
MESG : MLAUSG7_0241(cooS) MLAUSG7_1297(cdhA)
MESA : MLASG1_0903(cdhA) MLASG1_1434(cooS)
MIG : Metig_0288 Metig_0357 Metig_1381
MMAK : MMKA1_10980(cdhA) MMKA1_11410(cdhA)
MMG : MTBMA_c02870(cdhA1) MTBMA_c14200(cdhA2) MTBMA_c14210(cdhA3)
MWO : MWSIV6_0249(cdhA1) MWSIV6_0986(cdhA3)
METE : tca_00999 tca_01655
METK : FVF72_03125(cdhA) FVF72_06415 FVF72_06420
MEME : HYG87_06525 HYG87_07900(cdhA)
MKA : MK0536 MK0717(cdhA_1) MK0719(cdhA_1)
AFU : AF_1100 AF_1849 AF_2397
AFG : AFULGI_00011970 AFULGI_00021030 AFULGI_00026580
AST : Asulf_01231 Asulf_02029
FPL : Ferp_0731 Ferp_2369 Ferp_2562
MBA : Mbar_A0204 Mbar_A0434 Mbar_A3525 Mbar_A3717
MBY : MSBRM_0628 MSBRM_1052 MSBRM_2317 MSBRM_2755
MBW : MSBRW_0567 MSBRW_0792 MSBRW_1019 MSBRW_1209
MBAR : MSBR2_0095 MSBR2_1359 MSBR2_1750 MSBR2_2713
MBAK : MSBR3_0095 MSBR3_2715 MSBR3_2955
MAC : MA_1016(cdhA) MA_1309(cooS) MA_3282(cooS) MA_3860(cdhA) MA_4399(cdhA)
MMA : MM_0121 MM_0684 MM_2089 MM_2301
MMAZ : MmTuc01_0129 MmTuc01_0700 MmTuc01_2347
MMJ : MSMAS_0630 MSMAS_1212 MSMAS_2399 MSMAS_2596
MMAC : MSMAC_0632 MSMAC_1824 MSMAC_2048 MSMAC_2550
MVC : MSVAZ_0995 MSVAZ_2289 MSVAZ_2495 MSVAZ_3017
MEK : MSKOL_0967 MSKOL_2294 MSKOL_2507 MSKOL_3020
MLS : MSLAZ_0649 MSLAZ_0996 MSLAZ_1465
METM : MSMTP_0687 MSMTP_0695 MSMTP_0809 MSMTP_1179 MSMTP_1309
MEF : MSWH1_0796 MSWH1_2253
MEQ : MSWHS_0848 MSWHS_2820 MSWHS_3011
MSJ : MSSAC_0985 MSSAC_3454 MSSAC_3597 MSSAC_4086
MSZ : MSSIH_0886 MSSIH_2982 MSSIH_3137 MSSIH_3621
MSW : MSSIT_0920 MSSIT_3039 MSSIT_3208 MSSIT_3674
MTHR : MSTHT_0128 MSTHT_2340
MTHE : MSTHC_0600 MSTHC_0940
MHOR : MSHOH_0739 MSHOH_2496 MSHOH_3023 MSHOH_3042 MSHOH_3260
MZI : HWN40_01045(cooS) HWN40_08225(cdhA)
MMAV : RE476_02125(cdhA) RE476_10120(cooS)
MSEB : RE474_06710(cooS) RE474_12020(cdhA)
MHZ : Metho_0975 Metho_1412
MTP : Mthe_0292 Mthe_1216 Mthe_1341
MCJ : MCON_1332(cdhA) MCON_2865(cooS)
MHI : Mhar_0789 Mhar_1630 Mhar_2328
MRTJ : KHC33_06770(cooS) KHC33_09830(cdhA) KHC33_13060(cooS)
MCHK : MchiMG62_13740(cooS)
MEFW : F1737_05325(cooS) F1737_06810(cooS)
MESB : L1S32_10345(cooS) L1S32_11700(cooS)
BARC : AOA65_0464(cdhA2) AOA65_1716(cdhA)
» show all
Taxonomy
Reference
Authors
Ragsdale SW, Clark JE, Ljungdahl LG, Lundie LL, Drake HL.
Title
Properties of purified carbon monoxide dehydrogenase from Clostridium thermoaceticum, a nickel, iron-sulfur protein.
Journal
J Biol Chem 258:2364-9 (1983)
Reference
Authors
Diekert G, Ritter M.
Title
Purification of the nickel protein carbon monoxide dehydrogenase of Clostridium thermoaceticum.
Journal
Reference
Authors
Bonam D, Ludden PW.
Title
Purification and characterization of carbon monoxide dehydrogenase, a nickel, zinc, iron-sulfur protein, from Rhodospirillum rubrum.
Journal
J Biol Chem 262:2980-7 (1987)
Reference
Authors
Drennan CL, Heo J, Sintchak MD, Schreiter E, Ludden PW.
Title
Life on carbon monoxide: X-ray structure of Rhodospirillum rubrum Ni-Fe-S carbon monoxide dehydrogenase.
Journal
Sequence
Reference
Authors
Dobbek H, Svetlitchnyi V, Gremer L, Huber R, Meyer O.
Title
Crystal structure of a carbon monoxide dehydrogenase reveals a [Ni-4Fe-5S] cluster.
Journal
Sequence
Reference
Authors
Doukov TI, Iverson TM, Seravalli J, Ragsdale SW, Drennan CL
Title
A Ni-Fe-Cu center in a bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase.
Journal
Sequence
Reference
Authors
Can M, Armstrong FA, Ragsdale SW
Title
Structure, function, and mechanism of the nickel metalloenzymes, CO dehydrogenase, and acetyl-CoA synthase.
Journal
Other DBs
ExplorEnz - The Enzyme Database: 1.2.7.4
ExPASy - ENZYME nomenclature database: 1.2.7.4
BRENDA, the Enzyme Database: 1.2.7.4
LinkDB
All DBs