KEGG   COMPOUND: C00047
Entry
C00047                      Compound                               
Name
L-Lysine;
Lysine acid;
2,6-Diaminohexanoic acid
Formula
C6H14N2O2
Exact mass
146.1055
Mol weight
146.1876
Structure
Remark
Same as: D02304
Reaction
R00445 R00446 R00447 R00448 R00449 R00451 R00452 R00453
R00454 R00457 R00458 R00459 R00460 R00461 R00462 R00463
R00545 R00612 R00715 R00716 R00910 R00911 R01077 R01396
R01620 R02786 R03095 R03658 R07598 R07646 R08125 R09597
R09779 R10010 R10011 R10054 R10277 R10699 R11190 R11862
R12407 R12506
Pathway
map00300  Lysine biosynthesis
map00310  Lysine degradation
map00470  D-Amino acid metabolism
map00780  Biotin metabolism
map00960  Tropane, piperidine and pyridine alkaloid biosynthesis
map00970  Aminoacyl-tRNA biosynthesis
map00997  Biosynthesis of various other secondary metabolites
map01060  Biosynthesis of plant secondary metabolites
map01064  Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid
map01100  Metabolic pathways
map01110  Biosynthesis of secondary metabolites
map01120  Microbial metabolism in diverse environments
map01210  2-Oxocarboxylic acid metabolism
map01230  Biosynthesis of amino acids
map02010  ABC transporters
map04974  Protein digestion and absorption
Module
M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
M00030  Lysine biosynthesis, AAA pathway, 2-oxoglutarate => 2-aminoadipate => lysine
M00031  Lysine biosynthesis, mediated by LysW, 2-aminoadipate => lysine
M00032  Lysine degradation, lysine => saccharopine => acetoacetyl-CoA
M00525  Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
M00526  Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
M00906  Ethynylserine biosynthesis, lysine => ethynylserine
M00918  Aerobactin biosynthesis, lysine => aerobactin
M00956  Lysine degradation, bacteria, L-lysine => succinate
M00957  Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
M00960  Lysine degradation, bacteria, L-lysine => D-lysine => succinate
Enzyme
1.4.1.15        1.4.1.18        1.4.3.14        1.4.3.20        
1.5.1.7         1.5.1.8         1.5.1.16        1.5.3.4         
1.13.12.2       1.14.13.59      1.14.20.-       2.1.3.8         
2.1.4.3         2.3.1.32        2.3.1.306       2.6.1.36        
2.6.1.71        2.6.1.105       3.4.13.4        3.4.14.13       
3.5.1.12        3.5.1.17        3.5.1.130       3.5.1.-         
3.5.2.11        3.5.-.-         4.1.1.18        4.1.1.20        
4.3.1.28        4.3.2.8         5.1.1.5         5.1.1.10        
5.4.3.2         5.4.99.58       6.1.1.6         6.3.2.7         
6.3.2.11        6.3.2.20        6.3.2.59        6.3.4.19
Brite
Compounds with biological roles [BR:br08001]
 Peptides
  Amino acids
   Common amino acids
    C00047  Lysine (Lys)
Anatomical Therapeutic Chemical (ATC) classification [BR:br08303]
 B BLOOD AND BLOOD FORMING ORGANS
  B05 BLOOD SUBSTITUTES AND PERFUSION SOLUTIONS
   B05X I.V. SOLUTION ADDITIVES
    B05XB Amino acids
     B05XB03 Lysine
      D02304  Lysine (USAN/INN)
Risk category of Japanese OTC drugs [BR:br08312]
 Third-class OTC drugs
  Inorganic and organic chemicals
   Lysine
    D02304  Lysine (USAN/INN)
Other DBs
CAS: 56-87-1
PubChem: 3349
ChEBI: 18019
KNApSAcK: C00001378
PDB-CCD: LYS[PDBj]
3DMET: B00013
NIKKAJI: J9.176F
LinkDB
KCF data

ATOM        10
            1   C1c C    29.3300  -16.8700
            2   C1b C    28.1400  -16.1700
            3   C6a C    30.5200  -16.1000
            4   N1a N    29.3300  -18.2700
            5   C1b C    26.9500  -16.8700
            6   O6a O    31.7100  -16.8000
            7   O6a O    30.5200  -14.7000
            8   C1b C    25.6900  -16.2400
            9   C1b C    24.5000  -16.9400
            10  N1a N    23.2400  -16.2400
BOND        9
            1     1   2 1
            2     1   3 1
            3     1   4 1 #Up
            4     2   5 1
            5     3   6 1
            6     3   7 2
            7     5   8 1
            8     8   9 1
            9     9  10 1

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