Entry
Name
Vancomycin (USP); Vancocin (TN)
Formula
C66H75Cl2N9O24
Exact mass
1447.4302
Mol weight
1449.25
Structure
Mol file KCF file DB search
Simcomp
Neighbor
Source
Amycolatopsis orientalis [TAX:
31958 ], Streptomyces orientalis [TAX:
31958 ]
Class
Antibacterial
DG01580 Glycopeptide antibiotic
Remark
Product (DG00086): D00926<JP /US >
Efficacy
Antibacterial, Cell wall biosynthesis inhibitor
Comment
Natural product
Glycopeptide
Vancomycin makes complex formation with D-alanyl-D-alanine of Peptidoglycan, and inhibites cross-link between protein and peptideglycan.
Target
peptidoglycan (D-Ala-D-Ala)
Pathway
Interaction
DDI search
Biosynthesis
map01055 Biosynthesis of vancomycin group antibiotics
Other map
map01503 Cationic antimicrobial peptide (CAMP) resistance
Brite
Anatomical Therapeutic Chemical (ATC) classification [BR:br08303 ]
A ALIMENTARY TRACT AND METABOLISM
A07 ANTIDIARRHEALS, INTESTINAL ANTIINFLAMMATORY/ANTIINFECTIVE AGENTS
A07A INTESTINAL ANTIINFECTIVES
A07AA Antibiotics
A07AA09 Vancomycin
D00212 Vancomycin (USP)
J ANTIINFECTIVES FOR SYSTEMIC USE
J01 ANTIBACTERIALS FOR SYSTEMIC USE
J01X OTHER ANTIBACTERIALS
J01XA Glycopeptide antibacterials
J01XA01 Vancomycin
D00212 Vancomycin (USP)
S SENSORY ORGANS
S01 OPHTHALMOLOGICALS
S01A ANTIINFECTIVES
S01AA Antibiotics
S01AA28 Vancomycin
D00212 Vancomycin (USP)
Drug groups [BR:br08330 ]
Antibacterial
DG01580 Glycopeptide antibiotic
DG00086 Vancomycin
D00212 Vancomycin
Antimicrobials [BR:br08307 ]
Antibacterials
Cell wall biosynthesis inhibitor, other
Glycopeptide
D00212 Vancomycin (USP)
Drug groups [BR:br08330 ]
Antibacterial
DG01580 Glycopeptide antibiotic
DG00086 Vancomycin
Antimicrobials abbreviations [BR:br08327 ]
Antibacterials
Cell wall biosynthesis inhibitor, other
Glycopeptide
DG00086 Vancomycin
BRITE hierarchy
Other DBs
LinkDB
All DBs
KCF data
Show ATOM 101
1 C1y C 22.1523 -23.0181
2 C1x C 22.1616 -21.6755
3 O2x O 23.3049 -23.6865
4 C1z C 23.3233 -21.0234
5 C1y C 24.4667 -23.0342
6 C1y C 24.4759 -21.6916
7 C1a C 22.3951 -19.9369
8 N1a N 24.2867 -19.9500
9 C1a C 25.6267 -23.7026
10 O1a O 25.6451 -21.0396
11 C8y C 19.9288 -18.7446
12 C8y C 21.0859 -18.0770
13 C8y C 18.7713 -18.0843
14 O2a O 19.9371 -20.0799
15 C8x C 21.0786 -16.7343
16 O2x O 22.2358 -18.7373
17 C8x C 18.7640 -16.7491
18 O2x O 17.6068 -18.7373
19 C1y C 18.7766 -21.8455
20 C8y C 19.9139 -16.0667
21 C8y C 23.4004 -18.0696
22 C8y C 16.4420 -18.0770
23 C1y C 18.7766 -23.1881
24 O2x O 17.6121 -21.1779
25 C1y C 19.9467 -13.9511
26 C8y C 23.4004 -16.7343
27 C8x C 24.5577 -18.7298
28 C8y C 15.2849 -18.7373
29 C8x C 16.4346 -16.7343
30 C1y C 17.6268 -23.8707
31 C1y C 16.4474 -21.8604
32 C5x C 21.0265 -13.2760
33 N1x N 18.7270 -13.2833
34 C8x C 24.5577 -16.0591
35 X Cl 22.2358 -16.0518
36 C8x C 25.7075 -18.0696
37 C8x C 14.1275 -18.0843
38 X Cl 15.2774 -20.0726
39 C8x C 15.2701 -16.0667
40 C1y C 16.4546 -23.2105
41 O1a O 17.6194 -25.1986
42 N1x N 22.1913 -13.9511
43 O5x O 21.0192 -11.9407
44 C5x C 17.5695 -13.9584
45 C8y C 25.7075 -16.7343
46 C8y C 14.1203 -16.7491
47 O1a O 15.2899 -23.8632
48 C1y C 23.3411 -13.2760
49 C1y C 16.4124 -13.2909
50 O5x O 17.5623 -15.2937
51 C1y C 26.8574 -16.0518
52 C1y C 12.9555 -16.0667
53 C8y C 23.2785 -11.9407
54 C5x C 24.4983 -13.9435
55 N1x N 15.2552 -13.9660
56 C1y C 26.8499 -13.9511
57 O1a O 28.0146 -16.7270
58 C1y C 12.9481 -13.9733
59 O1a O 11.7908 -16.7343
60 C8x C 24.5058 -11.2729
61 C8x C 22.1840 -11.2729
62 N1x N 25.6554 -13.2685
63 C5x C 14.1054 -13.2982
64 C5x C 28.0073 -13.2760
65 N1b N 11.7834 -13.3057
66 C8y C 24.5058 -9.9303
67 C8x C 22.1840 -9.9376
68 O5x O 14.1678 -11.9629
69 N1x N 27.9998 -11.9407
70 O5x O 29.1645 -13.9511
71 C5a C 10.6261 -13.9660
72 C8y C 25.6703 -9.2774
73 C8y C 23.3411 -9.2625
74 C1y C 26.8350 -11.2729
75 C1c C 9.4688 -13.2982
76 O5a O 10.6187 -15.3010
77 C8y C 26.8277 -9.9376
78 C8y C 25.6630 -7.9347
79 C6a C 29.0755 -9.9897
80 C1b C 9.4615 -11.9629
81 N1b N 8.3041 -13.9584
82 C8x C 27.9849 -9.2625
83 C8x C 26.8129 -7.2596
84 O1a O 24.4983 -7.2596
85 C8y C 27.9776 -7.9198
86 O1a O 29.1273 -7.2375
87 O5x O 24.5017 -15.3103
88 O1a O 23.3357 -7.8673
89 O6a O 30.2660 -10.6825
90 O6a O 29.0800 -8.6255
91 C1a C 8.3012 -15.3102
92 C1c C 8.2758 -11.2878
93 C1a C 7.0582 -12.0004
94 C1a C 8.2672 -9.9349
95 C1b C 16.4087 -11.1067
96 C5a C 17.5830 -10.4243
97 N1a N 18.7559 -11.0972
98 O5a O 17.5793 -9.0391
99 C1b C 15.2538 -21.1805
100 O1a O 14.0910 -21.8612
101 O2a O 20.3945 -23.8738
BOND 110
1 1 2 1
2 1 3 1
3 2 4 1
4 3 5 1
5 4 6 1
6 4 7 1 #Up
7 4 8 1 #Down
8 5 9 1 #Down
9 6 10 1 #Down
10 5 6 1
11 11 12 1
12 11 13 2
13 11 14 1
14 12 15 2
15 12 16 1
16 13 17 1
17 13 18 1
18 19 14 1 #Up
19 15 20 1
20 16 21 1
21 18 22 1
22 19 23 1
23 19 24 1
24 20 25 1
25 21 26 1
26 21 27 2
27 22 28 1
28 22 29 2
29 23 30 1
30 24 31 1
31 25 32 1
32 25 33 1 #Up
33 26 34 2
34 26 35 1
35 27 36 1
36 28 37 2
37 28 38 1
38 29 39 1
39 30 40 1
40 30 41 1 #Up
41 32 42 1
42 32 43 2
43 33 44 1
44 34 45 1
45 37 46 1
46 40 47 1 #Down
47 42 48 1
48 44 49 1
49 44 50 2
50 45 51 1
51 46 52 1
52 48 53 1
53 48 54 1 #Down
54 49 55 1
55 51 56 1
56 51 57 1 #Down
57 52 58 1
58 52 59 1 #Up
59 53 60 1
60 53 61 2
61 54 62 1
62 55 63 1
63 56 64 1
64 58 65 1 #Up
65 60 66 2
66 61 67 1
67 63 68 2
68 64 69 1
69 64 70 2
70 65 71 1
71 66 72 1
72 66 73 1
73 69 74 1
74 71 75 1
75 71 76 2
76 72 77 2
77 72 78 1
78 74 79 1 #Down
79 75 80 1
80 75 81 1 #Down
81 77 82 1
82 78 83 2
83 78 84 1
84 82 85 2
85 85 86 1
86 17 20 2
87 31 40 1
88 36 45 2
89 39 46 2
90 56 62 1 #Down
91 58 63 1
92 67 73 2
93 74 77 1
94 83 85 1
95 54 87 2
96 73 88 1
97 79 89 1
98 79 90 2
99 81 91 1
100 80 92 1
101 92 93 1
102 92 94 1
103 49 95 1 #Up
104 95 96 1
105 96 97 1
106 96 98 2
107 31 99 1 #Up
108 99 100 1
109 23 101 1 #Down
110 1 101 1 #Up