KEGG   ORTHOLOGY: K14043
Entry
K14043                      KO                                     
Symbol
CPS4
Name
syn-copalyl-diphosphate synthase [EC:5.5.1.14]
Pathway
map00904  Diterpenoid biosynthesis
map01110  Biosynthesis of secondary metabolites
Reaction
R06312  9alpha-copalyl-diphosphate lyase (decyclizing)
Brite
KEGG Orthology (KO) [BR:ko00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00904 Diterpenoid biosynthesis
    K14043  CPS4; syn-copalyl-diphosphate synthase
Enzymes [BR:ko01000]
 5. Isomerases
  5.5  Intramolecular lyases
   5.5.1  Intramolecular lyases (only sub-subclass identified to date)
    5.5.1.14  syn-copalyl-diphosphate synthase
     K14043  CPS4; syn-copalyl-diphosphate synthase
Other DBs
GO: 0051498
Genes
OSA: 4335090(CPS4)
OBR: 102711387
OGL: 127769802 127784160
ATS: 109740374 109749367 109753582 109761744 109773971
TDC: 119283969 119352290 119358646 119358651 119360254 119361809 119365398 119368744
TAES: 100286848 100415837 123040050 123040053 123040056 123042578 123048255 123048260 123055050 123170790 123184292 123184306 123186463 123187001
TUA: 125526928 125527262 125527263 125530796 125535114 125535132
LPER: 127303671
LRD: 124656526 124672836 124673546
SBI: 8071950
ZMA: 103641248
 » show all
Reference
  Authors
Otomo K, Kenmoku H, Oikawa H, Konig WA, Toshima H, Mitsuhashi W, Yamane H, Sassa T, Toyomasu T
  Title
Biological functions of ent- and syn-copalyl diphosphate synthases in rice: key enzymes for the branch point of gibberellin and phytoalexin biosynthesis.
  Journal
Plant J 39:886-93 (2004)
DOI:10.1111/j.1365-313X.2004.02175.x
  Sequence
[osa:4335090]
LinkDB

KEGG   ORTHOLOGY: K12928
Entry
K12928            Tight     KO                                     
Symbol
K12928, ACS
Name
aphidicolan-16beta-ol synthase/syn-copalyl-diphosphate synthase [EC:4.2.3.42 5.5.1.14]
Pathway
map00904  Diterpenoid biosynthesis
map01110  Biosynthesis of secondary metabolites
Reaction
R06312  9alpha-copalyl-diphosphate lyase (decyclizing)
R06313  9alpha-copalyl-diphosphate diphosphate-lyase (aphidicolan-16beta-ol-forming)
R06314  
R06315  
Brite
KEGG Orthology (KO) [BR:ko00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00904 Diterpenoid biosynthesis
    K12928  K12928, ACS; aphidicolan-16beta-ol synthase/syn-copalyl-diphosphate synthase
Enzymes [BR:ko01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.3  Acting on phosphates
    4.2.3.42  aphidicolan-16beta-ol synthase
     K12928  K12928, ACS; aphidicolan-16beta-ol synthase/syn-copalyl-diphosphate synthase
 5. Isomerases
  5.5  Intramolecular lyases
   5.5.1  Intramolecular lyases (only sub-subclass identified to date)
    5.5.1.14  syn-copalyl-diphosphate synthase
     K12928  K12928, ACS; aphidicolan-16beta-ol synthase/syn-copalyl-diphosphate synthase
Other DBs
GO: 0046567 0051498
Genes
AG: BAB62102(ACS)
Reference
  Authors
Oikawa H, Toyomasu T, Toshima H, Ohashi S, Kawaide H, Kamiya Y, Ohtsuka M, Shinoda S, Mitsuhashi W, Sassa T
  Title
Cloning and functional expression of cDNA encoding aphidicolan-16 beta-ol synthase: a key enzyme responsible for formation of an unusual diterpene skeleton in biosynthesis of aphidicolin.
  Journal
J Am Chem Soc 123:5154-5 (2001)
DOI:10.1021/ja015747j
  Sequence
Reference
  Authors
Toyomasu T, Nakaminami K, Toshima H, Mie T, Watanabe K, Ito H, Matsui H, Mitsuhashi W, Sassa T, Oikawa H
  Title
Cloning of a gene cluster responsible for the biosynthesis of diterpene aphidicolin, a specific inhibitor of DNA polymerase alpha.
  Journal
Biosci Biotechnol Biochem 68:146-52 (2004)
DOI:10.1271/bbb.68.146
  Sequence
LinkDB

KEGG   ENZYME: 5.5.1.14
Entry
EC 5.5.1.14                 Enzyme                                 
Name
syn-copalyl-diphosphate synthase;
OsCyc1;
OsCPSsyn;
syn-CPP synthase;
syn-copalyl diphosphate synthase;
9alpha-copalyl-diphosphate lyase (decyclizing)
Class
Isomerases;
Intramolecular lyases;
Intramolecular lyases (only sub-subclass identified to date)
Sysname
9alpha-copalyl-diphosphate lyase (ring-opening)
Reaction(IUBMB)
geranylgeranyl diphosphate = 9alpha-copalyl diphosphate [RN:R06312]
Reaction(KEGG)
R06312
Substrate
geranylgeranyl diphosphate [CPD:C00353]
Product
9alpha-copalyl diphosphate [CPD:C11902]
Comment
Requires a divalent metal ion, preferably Mg2+, for activity. This class II terpene synthase produces syn-copalyl diphosphate, a precursor of several rice phytoalexins, including oryzalexin S and momilactones A and B. Phytoalexins are diterpenoid secondary metabolites that are involved in the defense mechanism of the plant, and are produced in response to pathogen attack through the perception of elicitor signal molecules such as chitin oligosaccharide, or after exposure to UV irradiation. The enzyme is constitutively expressed in the roots of plants where one of its products, momilactone B, acts as an allelochemical (a molecule released into the environment to suppress the growth of neighbouring plants). In other tissues the enzyme is upregulated by conditions that stimulate the biosynthesis of phytoalexins.
History
EC 5.5.1.14 created 2008
Pathway
ec00904  Diterpenoid biosynthesis
ec01110  Biosynthesis of secondary metabolites
Orthology
K12928  aphidicolan-16beta-ol synthase/syn-copalyl-diphosphate synthase
K14043  syn-copalyl-diphosphate synthase
Genes
OSA4335090(CPS4)
OBR102711387
OGL127769802 127784160
ATS109740374 109749367 109753582 109761744 109773971
TDC119283969 119352290 119358646 119358651 119360254 119361809 119365398 119368744
TAES100286848 100415837 123040050 123040053 123040056 123042578 123048255 123048260 123055050 123170790 123184292 123184306 123186463 123187001
TUA125526928 125527262 125527263 125530796 125535114 125535132
LPER127303671
LRD124656526 124672836 124673546
SBI8071950
ZMA103641248
SITA101753858 101768451
SVS117841994 117844049
PVIR120660278 120660280 120674817
PHAI112873386 112881820
 » show all
Reference
1  [PMID:15341631]
  Authors
Otomo K, Kenmoku H, Oikawa H, Konig WA, Toshima H, Mitsuhashi W, Yamane H, Sassa T, Toyomasu T
  Title
Biological functions of ent- and syn-copalyl diphosphate synthases in rice: key enzymes for the branch point of gibberellin and phytoalexin biosynthesis.
  Journal
Plant J 39:886-93 (2004)
DOI:10.1111/j.1365-313X.2004.02175.x
  Sequence
[osa:4335090]
Reference
2  [PMID:15255861]
  Authors
Xu M, Hillwig ML, Prisic S, Coates RM, Peters RJ.
  Title
Functional identification of rice syn-copalyl diphosphate synthase and its role in initiating biosynthesis of diterpenoid phytoalexin/allelopathic natural products.
  Journal
Plant J 39:309-18 (2004)
DOI:10.1111/j.1365-313X.2004.02137.x
  Sequence
[osa:4335090]
Other DBs
ExplorEnz - The Enzyme Database: 5.5.1.14
IUBMB Enzyme Nomenclature: 5.5.1.14
ExPASy - ENZYME nomenclature database: 5.5.1.14
BRENDA, the Enzyme Database: 5.5.1.14
LinkDB

KEGG   REACTION: R06312
Entry
R06312                      Reaction                               
Name
9alpha-copalyl-diphosphate lyase (decyclizing)
Definition
Geranylgeranyl diphosphate <=> 9alpha-Copalyl diphosphate
Equation
Reaction class
RC00642  C00353_C11902
Enzyme
Pathway
rn00904  Diterpenoid biosynthesis
rn01110  Biosynthesis of secondary metabolites
Brite
Enzymatic reactions [BR:br08201]
 5. Isomerase reactions
  5.5  Intramolecular lyases
   5.5.1  Intramolecular lyases (only sub-subclass identified to date)
    5.5.1.14
     R06312  Geranylgeranyl diphosphate <=> 9alpha-Copalyl diphosphate
Orthology
K12928  aphidicolan-16beta-ol synthase/syn-copalyl-diphosphate synthase [EC:4.2.3.42 5.5.1.14]
K14043  syn-copalyl-diphosphate synthase [EC:5.5.1.14]
Other DBs
RHEA: 25527
LinkDB

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