KEGG   ORTHOLOGY: K21231
Entry
K21231                      KO                                     
Symbol
bciB
Name
3,8-divinyl protochlorophyllide a 8-vinyl-reductase (ferredoxin) [EC:1.3.7.13]
Pathway
map00860  Porphyrin metabolism
map01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ko00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    K21231  bciB; 3,8-divinyl protochlorophyllide a 8-vinyl-reductase (ferredoxin)
Enzymes [BR:ko01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.7  With an iron-sulfur protein as acceptor
    1.3.7.13  3,8-divinyl protochlorophyllide a 8-vinyl-reductase (ferredoxin)
     K21231  bciB; 3,8-divinyl protochlorophyllide a 8-vinyl-reductase (ferredoxin)
Other DBs
RN: R11519
COG: COG1035
Genes
ALV: Alvin_1181
ATEP: Atep_13950
TVI: Thivi_1847
MPUR: MARPU_13415
TSY: THSYN_32255
TTP: E6P07_07490
CJAP: GWK36_08640
THIM: KFB96_20300
TBOG: LT988_15460
SYN: slr1923
SYZ: MYO_120210
SYY: SYNGTS_2003(slr1923)
SYT: SYNGTI_2002(slr1923)
SYS: SYNPCCN_2001(slr1923)
SYQ: SYNPCCP_2001(slr1923)
SYJ: D082_17500
SYO: C7I86_10445
SYC: syc0195_d
SYU: M744_09820
SYF: Synpcc7942_1359
SYR: SynRCC307_0774(frhB)
SYX: SynWH7803_1550(frhB)
SYP: SYNPCC7002_A2638(fruB)
CYA: CYA_1215
CYB: CYB_1261
SYNE: Syn6312_0084
SYNP: Syn7502_00002
SYV: AWQ23_13150
SYL: AWQ21_13320
SYNC: CB0101_12805
DSL: Dacsa_2505
CGC: Cyagr_0231
CYI: CBM981_1201
CMP: Cha6605_2982
AMR: AM1_2849(frhB)
TVN: NIES2134_117710
SLW: BRW62_08195
TEL: tll1845
THN: NK55_05905(cvrA)
THEC: FFX45_08395
LEN: LEP3755_15190
LET: O77CONTIG1_04225
LBO: LBWT_11590
KOV: K9N68_33530
LSC: KIK02_10155
LSK: J5X98_02715
HHG: XM38_013900
PSEU: Pse7367_0632
PSER: ABRG53_0874
THEU: HPC62_06265
GLP: Glo7428_1172
GEN: GM3709_977
GEE: GM3708_3044
CHON: NIES4102_39060
MAR: MAE_40060
MIQ: B5D77_12980
MVZ: myaer102_14830
CAN: Cyan10605_0476
CSN: Cyast_1162
CYL: AA637_09240(frhB)
HAO: PCC7418_0506
ENN: FRE64_15320
CYT: cce_4662
CWA: CwatDRAFT_5144
CYP: PCC8801_1364
CYH: Cyan8802_1394
CYC: PCC7424_0101
CYJ: Cyan7822_1352
CYN: Cyan7425_2254
TER: Tery_0742
ARP: NIES39_B00910
PAGH: NIES204_39540
OXY: HCG48_07140
MVAG: D0A34_03045
LFS: HFV01_07105
MIC: Mic7113_6152
GEI: GEI7407_0463
OAC: Oscil6304_5624
ONI: Osc7112_3795
MPRO: BJP34_26410
PHOR: JWS08_19460
CEP: Cri9333_0217
GVI: gll0878 glr2543
GLJ: GKIL_2429(frhB) GKIL_4087(frhB)
GML: ISF26_18540 ISF26_22815
ANA: all1601
NPU: Npun_R5367
NOS: Nos7107_0620
NOP: Nos7524_4753
NON: NOS3756_14520
NFL: COO91_08888
NOE: CLI64_08240
NSH: GXM_03620
NED: HUN01_32670
AVA: Ava_4214
NAZ: Aazo_3552
ANB: ANA_C20199
ACY: Anacy_4773
AWA: AA650_16785
ANN: EH233_10975
CSG: Cylst_2678
RSIN: B6N60_02674
CALO: Cal7507_2596
CALT: Cal6303_5470
CALH: IJ00_05065
RIV: Riv7116_3544
FIS: FIS3754_38180
DOU: BMF77_00176
DFS: HGD76_17220
CCUR: IAR63_05415
AFLO: HEQ12_18900
TOQ: HCG51_19375
NCN: BZZ01_14775
CTHE: Chro_1099
PLP: Ple7327_2676
SCS: Sta7437_0582
STAN: STA3757_21750
CAU: Caur_2555
CHL: Chy400_2759
CAG: Cagg_3479
CVL: J8C06_12185
CHLO: J8C02_13070
CPH: Cpha266_0188 Cpha266_0696
CLI: Clim_0952 Clim_1791
PPH: Ppha_2739
PAA: Paes_0603
PROS: CHL67_08655
CTS: Ctha_1208
 » show all
Reference
PMID:24151992
  Authors
Saunders AH, Golbeck JH, Bryant DA
  Title
Characterization of BciB: a ferredoxin-dependent 8-vinyl-protochlorophyllide reductase from the green sulfur bacterium Chloroherpeton thalassium.
  Journal
Biochemistry 52:8442-51 (2013)
DOI:10.1021/bi401172b
  Sequence
[cts:Ctha_1208]
LinkDB

KEGG   ENZYME: 1.3.7.13
Entry
EC 1.3.7.13                 Enzyme                                 
Name
3,8-divinyl protochlorophyllide a 8-vinyl-reductase (ferredoxin);
bciB (gene name);
cyano-type divinyl chlorophyllide a 8-vinyl-reductase
Class
Oxidoreductases;
Acting on the CH-CH group of donors;
With an iron-sulfur protein as acceptor
Sysname
protochlorophyllide-a:ferredoxin C-81-oxidoreductase
Reaction(IUBMB)
protochlorophyllide a + 2 oxidized ferredoxin [iron-sulfur] cluster = 3,8-divinyl protochlorophyllide a + 2 reduced ferredoxin [iron-sulfur] cluster + 2 H+ [RN:R11519]
Reaction(KEGG)
R11519
Substrate
protochlorophyllide a [CPD:C02880];
oxidized ferredoxin [iron-sulfur] cluster [CPD:C00139]
Product
3,8-divinyl protochlorophyllide a [CPD:C11831];
reduced ferredoxin [iron-sulfur] cluster [CPD:C00138];
H+ [CPD:C00080]
Comment
The enzyme, found in many phototrophic bacteria, land plants, and some green and red algae, is involved in the production of monovinyl versions of (bacterio)chlorophyll pigments from their divinyl precursors. Binds two [4Fe-4S] clusters and an FAD cofactor. It can also act on 3,8-divinyl chlorophyllide a, 3,8-divinyl chlorophyll a, and chlorophyll c2. cf. EC 1.3.1.75, 3,8-divinyl protochlorophyllide a 8-vinyl-reductase (NADPH).
History
EC 1.3.7.13 created 2016
Pathway
ec00860  Porphyrin metabolism
ec01100  Metabolic pathways
Orthology
K21231  3,8-divinyl protochlorophyllide a 8-vinyl-reductase (ferredoxin)
Genes
ALV: Alvin_1181
ATEP: Atep_13950
TVI: Thivi_1847
MPUR: MARPU_13415
TSY: THSYN_32255
TTP: E6P07_07490
CJAP: GWK36_08640
THIM: KFB96_20300
TBOG: LT988_15460
SYN: slr1923
SYZ: MYO_120210
SYY: SYNGTS_2003(slr1923)
SYT: SYNGTI_2002(slr1923)
SYS: SYNPCCN_2001(slr1923)
SYQ: SYNPCCP_2001(slr1923)
SYJ: D082_17500
SYO: C7I86_10445
SYC: syc0195_d
SYU: M744_09820
SYF: Synpcc7942_1359
SYR: SynRCC307_0774(frhB)
SYX: SynWH7803_1550(frhB)
SYP: SYNPCC7002_A2638(fruB)
CYA: CYA_1215
CYB: CYB_1261
SYNE: Syn6312_0084
SYNP: Syn7502_00002
SYV: AWQ23_13150
SYL: AWQ21_13320
SYNC: CB0101_12805
DSL: Dacsa_2505
CGC: Cyagr_0231
CYI: CBM981_1201
CMP: Cha6605_2982
AMR: AM1_2849(frhB)
TVN: NIES2134_117710
SLW: BRW62_08195
TEL: tll1845
THN: NK55_05905(cvrA)
THEC: FFX45_08395
LEN: LEP3755_15190
LET: O77CONTIG1_04225
LBO: LBWT_11590
KOV: K9N68_33530
LSC: KIK02_10155
LSK: J5X98_02715
HHG: XM38_013900
PSEU: Pse7367_0632
PSER: ABRG53_0874
THEU: HPC62_06265
GLP: Glo7428_1172
GEN: GM3709_977
GEE: GM3708_3044
CHON: NIES4102_39060
MAR: MAE_40060
MIQ: B5D77_12980
MVZ: myaer102_14830
CAN: Cyan10605_0476
CSN: Cyast_1162
CYL: AA637_09240(frhB)
HAO: PCC7418_0506
ENN: FRE64_15320
CYT: cce_4662
CWA: CwatDRAFT_5144
CYP: PCC8801_1364
CYH: Cyan8802_1394
CYC: PCC7424_0101
CYJ: Cyan7822_1352
CYN: Cyan7425_2254
TER: Tery_0742
ARP: NIES39_B00910
PAGH: NIES204_39540
OXY: HCG48_07140
MVAG: D0A34_03045
LFS: HFV01_07105
MIC: Mic7113_6152
GEI: GEI7407_0463
OAC: Oscil6304_5624
ONI: Osc7112_3795
MPRO: BJP34_26410
PHOR: JWS08_19460
CEP: Cri9333_0217
GVI: gll0878 glr2543
GLJ: GKIL_2429(frhB) GKIL_4087(frhB)
GML: ISF26_18540 ISF26_22815
ANA: all1601
NPU: Npun_R5367
NOS: Nos7107_0620
NOP: Nos7524_4753
NON: NOS3756_14520
NFL: COO91_08888
NOE: CLI64_08240
NSH: GXM_03620
NED: HUN01_32670
AVA: Ava_4214
NAZ: Aazo_3552
ANB: ANA_C20199
ACY: Anacy_4773
AWA: AA650_16785
ANN: EH233_10975
CSG: Cylst_2678
RSIN: B6N60_02674
CALO: Cal7507_2596
CALT: Cal6303_5470
CALH: IJ00_05065
RIV: Riv7116_3544
FIS: FIS3754_38180
DOU: BMF77_00176
DFS: HGD76_17220
CCUR: IAR63_05415
AFLO: HEQ12_18900
TOQ: HCG51_19375
NCN: BZZ01_14775
CTHE: Chro_1099
PLP: Ple7327_2676
SCS: Sta7437_0582
STAN: STA3757_21750
CAU: Caur_2555
CHL: Chy400_2759
CAG: Cagg_3479
CVL: J8C06_12185
CHLO: J8C02_13070
CPH: Cpha266_0188 Cpha266_0696
CLI: Clim_0952 Clim_1791
PPH: Ppha_2739
PAA: Paes_0603
PROS: CHL67_08655
CTS: Ctha_1208
 » show all
Reference
1  [PMID:17148453]
  Authors
Chew AG, Bryant DA
  Title
Characterization of a plant-like protochlorophyllide a divinyl reductase in green sulfur bacteria.
  Journal
J Biol Chem 282:2967-75 (2007)
DOI:10.1074/jbc.M609730200
Reference
2  [PMID:24151992]
  Authors
Saunders AH, Golbeck JH, Bryant DA
  Title
Characterization of BciB: a ferredoxin-dependent 8-vinyl-protochlorophyllide reductase from the green sulfur bacterium Chloroherpeton thalassium.
  Journal
Biochemistry 52:8442-51 (2013)
DOI:10.1021/bi401172b
  Sequence
[cts:Ctha_1208]
Reference
3  [PMID:24399236]
  Authors
Ito H, Tanaka A
  Title
Evolution of a new chlorophyll metabolic pathway driven by the dynamic changes in enzyme promiscuous activity.
  Journal
Plant Cell Physiol 55:593-603 (2014)
DOI:10.1093/pcp/pct203
  Sequence
[syn:slr1923]
Other DBs
ExplorEnz - The Enzyme Database: 1.3.7.13
IUBMB Enzyme Nomenclature: 1.3.7.13
ExPASy - ENZYME nomenclature database: 1.3.7.13
BRENDA, the Enzyme Database: 1.3.7.13
LinkDB

KEGG   REACTION: R11519
Entry
R11519                      Reaction                               
Name
protochlorophyllide-a:ferredoxin C-8(1)-oxidoreductase
Definition
Protochlorophyllide + 2 Oxidized ferredoxin <=> Divinylprotochlorophyllide + 2 Reduced ferredoxin + 2 H+
Equation
C02880 + 2 C00139 <=> C11831 + 2 C00138 + 2 C00080
Reaction class
RC01376  C02880_C11831
Enzyme
1.3.7.13
Pathway
rn00860  Porphyrin metabolism
rn01100  Metabolic pathways
Orthology
K21231  3,8-divinyl protochlorophyllide a 8-vinyl-reductase (ferredoxin) [EC:1.3.7.13]
Other DBs
RHEA: 48899
LinkDB

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