KEGG ORTHOLOGY: K26210

ORTHOLOGY: K26210

Entry

K26210                      KO

Symbol

E3.1.3.109

Name

ribulose-1,5-bisphosphate 5-phosphatase [EC:3.1.3.109]

Pathway

map00630

Glyoxylate and dicarboxylate metabolism

map01100

Metabolic pathways

Module

M00968

Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate

Reaction

R13090

D-ribulose-1,5-bisphosphate 5-phosphohydrolase

Brite

KEGG Orthology (KO) [BR:ko00001]
09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    K26210  E3.1.3.109; ribulose-1,5-bisphosphate 5-phosphatase
Enzymes [BR:ko01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.109  ribulose-1,5-bisphosphate 5-phosphatase
     K26210  E3.1.3.109; ribulose-1,5-bisphosphate 5-phosphatase

Other DBs

COG:

COG1011

Genes

PROD:

PCO85_03900

LYA:	RDV84_03740

POLK:

PKF022_03330

RUG:	QC826_14415

PALJ:

LZC94_26790

PIJ:	QEJ31_04230

SDRZ:

STHU:

HAL:

HSL:

HANR:

HDL:	HALDL1_07765

HHB:

Hhub_2472

HAGS:

JT689_06225

HABO:

JRZ79_04690

HNO:	LT974_09050

HLU:	LT972_08990

HANX:

ABSL23_12160

NHO:	HWV23_16865

NSAL:

HLA:

HALP:

HALB:

HEZZ:

HALQ:

HSS:	J7656_03735

HSAI:

HAZZ:

HALG:

HALU:

HMP:	K6T50_12535

HRE:	K6T36_12435

HRM:	K6T25_04175

HACB:

Hbl1158_04405

HAH:	Halar_0932

HTU:

Htur_2785

HSAL:

JMJ58_14520

HAKZ:

J0X25_02130

HXA:	Halxa_2271

NPE:	Natpe_0786

NAY:	HYG81_06945

HJT:	DVR14_13240

NGE:	Natgr_0733

HLC:	CHINAEXTREME17555

SAWL:

NGM29_12510

HALV:

NGM15_04365

NOU:	Natoc_1855

HDA:	BB347_09580

» show all

Reference

PMID:36434094

Authors

Sato T, Utashima SH, Yoshii Y, Hirata K, Kanda S, Onoda Y, Jin JQ, Xiao S, Minami R, Fukushima H, Noguchi A, Manabe Y, Fukase K, Atomi H.

Title

A non-carboxylating pentose bisphosphate pathway in halophilic archaea.

Journal

Commun Biol 5:1290 (2022)
DOI:10.1038/s42003-022-04247-2

Sequence

[hxa:Halxa_2271] [hal:VNG_1202C]

LinkDB

ENZYME: 3.1.3.109

Entry

EC 3.1.3.109                Enzyme

Name

ribulose-1,5-bisphosphate 5-phosphatase;
RuBP 5-phosphatase

Class

Hydrolases;
Acting on ester bonds;
Phosphoric-monoester hydrolases

Sysname

D-ribulose-1,5-bisphosphate 5-phosphohydrolase

Reaction(IUBMB)

D-ribulose-1,5-bisphosphate + H2O = D-ribulose 1-phosphate + phosphate [RN:R13090]

Reaction(KEGG)

R13090

Substrate

D-ribulose-1,5-bisphosphate;
H2O [CPD:C00001]

Product

D-ribulose 1-phosphate [CPD:C22337];
phosphate [CPD:C00009]

Comment

The enzyme, characterized from the halophilic archaeon Halopiger xanaduensis, participates in a non-carboxylating pentose bisphosphate pathway for nucleoside degradation, which is found in some halophilic archaea. The enzyme requires both monovalent and divalent ions for optimal activity.

History

EC 3.1.3.109 created 2022

Pathway

ec00630

Glyoxylate and dicarboxylate metabolism

ec01100

Metabolic pathways

Orthology

K26210

ribulose-1,5-bisphosphate 5-phosphatase

Genes

PROD:

PCO85_03900

LYA:	RDV84_03740

POLK:

PKF022_03330

RUG:	QC826_14415

PALJ:

LZC94_26790

PIJ:	QEJ31_04230

SDRZ:

NEH16_06960

STHU:

M1P56_15725

HAL:

VNG_1202C

HSL:

OE_2727R

HANR:

LJ422_04920

HDL:	HALDL1_07765

HHB:

Hhub_2472

HAGS:

JT689_06225

HABO:

JRZ79_04690

HNO:	LT974_09050

HLU:	LT972_08990

HANX:

ABSL23_12160

NHO:	HWV23_16865

NSAL:

HWV07_02150

HLA:

Hlac_2267

HALP:

DOS48_11400

HALB:

EKH57_13775

HEZZ:

EO776_12590

HALQ:

Hrr1229_009485

HSS:	J7656_03735

HSAI:

HPS36_09055

HAZZ:

KI388_11135

HALG:

HUG10_17300

HALU:

HUG12_19110

HMP:	K6T50_12535

HRE:	K6T36_12435

HRM:	K6T25_04175

HACB:

Hbl1158_04405

HAH:	Halar_0932

HTU:

Htur_2785

HSAL:

JMJ58_14520

HAKZ:

J0X25_02130

HXA:	Halxa_2271

NPE:	Natpe_0786

NAY:	HYG81_06945

HJT:	DVR14_13240

NGE:	Natgr_0733

HLC:	CHINAEXTREME17555

SAWL:

NGM29_12510

HALV:

NGM15_04365

NOU:	Natoc_1855

HDA:	BB347_09580

» show all

Reference

1 [PMID:36434094]

Authors

Sato T, Utashima SH, Yoshii Y, Hirata K, Kanda S, Onoda Y, Jin JQ, Xiao S, Minami R, Fukushima H, Noguchi A, Manabe Y, Fukase K, Atomi H.

Title

A non-carboxylating pentose bisphosphate pathway in halophilic archaea.

Journal

Commun Biol 5:1290 (2022)
DOI:10.1038/s42003-022-04247-2

Sequence

[hxa:Halxa_2271] [hal:VNG_1202C]

Other DBs

ExplorEnz - The Enzyme Database:

3.1.3.109

IUBMB Enzyme Nomenclature:

3.1.3.109

ExPASy - ENZYME nomenclature database:

3.1.3.109

BRENDA, the Enzyme Database:

3.1.3.109

LinkDB

REACTION: R13090

Entry

R13090                      Reaction

Name

D-ribulose-1,5-bisphosphate 5-phosphohydrolase

Definition

D-Ribulose 1,5-bisphosphate + H2O <=> D-Ribulose 1-phosphate + Orthophosphate

Equation

C01182 + C00001 <=> C22337 + C00009

Comment

ribulose 1,5-bisphosphate phosphatase

Reaction class

RC00017

C01182_C22337

Enzyme

3.1.3.109

Pathway

rn00630

Glyoxylate and dicarboxylate metabolism

rn01100

Metabolic pathways

Module

M00968

Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate

Brite

Enzymatic reactions [BR:br08201]
3. Hydrolase reactions
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.109
     R13090  D-Ribulose 1,5-bisphosphate + H2O <=> D-Ribulose 1-phosphate + Orthophosphate

Orthology

K26210

ribulose-1,5-bisphosphate 5-phosphatase [EC:3.1.3.109]

Reference

1 [PMID:36434094]

Authors

Sato T, Utashima SH, Yoshii Y, Hirata K, Kanda S, Onoda Y, Jin JQ, Xiao S, Minami R, Fukushima H, Noguchi A, Manabe Y, Fukase K, Atomi H.

Title

A non-carboxylating pentose bisphosphate pathway in halophilic archaea.

Journal

Commun Biol 5:1290 (2022)
DOI:10.1038/s42003-022-04247-2

Other DBs

RHEA:

77886

LinkDB

DBGET integrated database retrieval system