KEGG   Paracidovorax avenae: Acav_0616
Entry
Acav_0616         CDS       T01445                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
aaa  Paracidovorax avenae
Pathway
aaa03420  Nucleotide excision repair
aaa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aaa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Acav_0616
   03430 Mismatch repair
    Acav_0616
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aaa03400]
    Acav_0616
Enzymes [BR:aaa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Acav_0616
DNA repair and recombination proteins [BR:aaa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Acav_0616
   MMR (mismatch excision repair)
    Other MMR factors
     Acav_0616
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 AAA_12 Viral_helicase1 ResIII AAA_22 AAA_11
Other DBs
NCBI-ProteinID: ADX44539
UniProt: F0Q6Y0
LinkDB
Position
complement(655489..657486)
AA seq 665 aa
MAQPPSPAPLFLQRRPNDEQKAVLNTAAKTVLINALAGTGKTTTLATKAADLVQMRGARR
VLMLAYSDAGLAALHDRLGRYMPADAREVRIMTVEQLCAGLLQAQGLPVNTLAEPLERQL
LIRQAHAALLQELRHEAPPEAADFLARELDVQAFTDFEALAKQRLLHRDIAREGIHAAAY
CRDHALDYGLYLLLGRYERLRRGPDDEPQFYAPGDCTYEIARQLGELDFGDPCPWLQGRY
DAVLFDELQDLDEAAMLVLRHLVASGNGVFVGAGDFNQHILPGAFSVFGNGLQRIRQELP
EPPEVLTLNTTYRFGKAICEGLNPLFGVEFETHYPTKTARFERLAYDSDEDCARQLLAIH
QFVQRTPPPASGAAPCLTVVLRSPEDSVLLEWRFAHEGIHYACKGLKRFYQRPEIALVLA
LFRALPGCGGQVRLTQGILSSALDGLMRYVRRGSRPDADVLANGLFDLQALAQHSTAEVD
TRAVASELIHQPDRMRDFLLRASFDPNAPVASAACEAWLALPAEVCADAGRLCNHPLLRR
FFAEAPISPQEHRQCLDSLQALSRICAGLSVDEFLGQLALMVESGIRQHRQNEAPSLQLL
TVERCKGHEYEYVAVPLVERGRFPRAAALNEAYRERNMLYVALTRASRHLWLLEGSRRPV
SPGPV
NT seq 1998 nt   +upstreamnt  +downstreamnt
atggcccagcctccctcccccgcccccctcttcctccagcgccgcccgaacgacgagcag
aaggccgtcctcaacaccgcggcgaaaacggtgctcatcaacgcgctggcgggcacgggc
aagaccaccaccctggcgaccaaggcggcggacctggtccagatgcgcggtgcgcgccgg
gtgctcatgctggcctactccgacgcaggcctcgccgccctccacgaccggctgggccgc
tacatgccggccgacgcgcgcgaggtgcggatcatgacggtggagcagctctgcgccggc
ctgctgcaggcccagggcctgcccgtgaacaccctggccgagccactggagcgccaactg
ctgatccgccaggcccacgccgcgctgctgcaggaactgcggcatgaggcaccgcccgag
gccgcagacttcctggcccgcgaactcgacgtgcaggccttcaccgacttcgaggccctg
gccaagcagcgcctgctgcaccgcgacatcgcccgcgagggcattcatgccgccgcctac
tgccgggaccacgcgctggactacgggctctacctgctgctgggccggtacgaacgcctg
cgccgggggccggacgacgaaccgcagttctacgcccccggcgactgcacctatgaaatc
gcgcggcagctcggcgagctggacttcggcgacccctgcccctggctgcagggccgctac
gacgcggtgctgttcgacgaactgcaggacctggacgaggccgccatgctggtgctgcgc
cacctcgtggccagcggcaacggcgtgttcgtgggtgcgggcgacttcaaccagcacatc
ctgcccggcgcgttctccgtcttcggcaacgggctgcaacgcatccggcaggaactgccc
gagccgcccgaagtgctcacgctcaacaccacctaccgtttcggcaaggccatctgcgaa
ggcctgaacccgctcttcggcgtggaattcgagacgcactaccccaccaagaccgcccgc
ttcgagcggctcgcctatgacagcgacgaggactgcgcccggcaactgctggccatccac
cagttcgtgcagcgcaccccgcccccggccagcggcgctgcgccctgcctgaccgtggtg
ctgcgctcgcccgaggactccgtgctgctggaatggcgcttcgcccacgagggcatccat
tacgcctgcaagggcctgaaacgtttctaccagcggcccgagatcgccctggtgctggcc
ctgttccgggcgctgccgggctgcggcggccaggtgcgcctcacgcagggcatcctgagc
agtgcgctcgacggcctgatgcgctacgtgcggcgcggcagccggcccgatgccgacgtg
ctcgccaacggcctgttcgacctgcaggccctggcgcagcactccaccgccgaagtggac
acccgcgccgtcgcttccgaactcatccaccagccggaccgcatgcgcgacttcctgctg
cgtgccagcttcgatcccaacgcgcccgtggcctccgccgcctgcgaggcctggctcgcc
ctgccggccgaggtgtgcgcggacgccggccggctctgcaaccacccgctgctgcgccgt
ttcttcgccgaagcccccatcagcccccaggaacaccggcagtgcctggacagcctgcag
gcactctcgcgcatctgcgcgggcctgtccgtcgatgaattcctggggcaattggcactc
atggtggagtccggcatccggcagcatcgccagaacgaggcccccagcctgcagctgctg
acggtggagcgctgcaaggggcacgaatacgaatacgtcgccgtgccgctggtcgagcgc
ggccgctttccccgcgccgccgcgctgaacgaggcctaccgggaacgcaacatgctctac
gtggccctgacccgcgccagccggcacctctggctgctggaaggcagccggcgcccggtc
agccccgggccggtgtga

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