Amycolatopsis albispora: A4R43_33650
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Entry
A4R43_33650 CDS
T05547
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
aab
Amycolatopsis albispora
Pathway
aab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A4R43_33650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aab03021
]
A4R43_33650
03400 DNA repair and recombination proteins [BR:
aab03400
]
A4R43_33650
Enzymes [BR:
aab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A4R43_33650
Transcription machinery [BR:
aab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A4R43_33650
DNA repair and recombination proteins [BR:
aab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A4R43_33650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
Peptidase_M23
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AXB46780
UniProt:
A0A344LFF6
LinkDB
All DBs
Position
7177007..7180516
Genome browser
AA seq
1169 aa
AA seq
DB search
MAVSPANQATAATTSAESASESSELATIPGAPKRVSFAKIREPLSTPNLLDVQIRSFEWF
TGDEAWFERRVEEGEENPVGGLEEVLNEISPIEDFSGSMSLSFSDPRFDEVKASVEECKD
KDMTYAAPLFVTAEFVNNNTGEIKSQTVFMGDFPVMTDKGTFVINGTERVVVSQLVRSPG
VYFDSSVDKATDKDVFSTRIIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWT
TEAIRERFSFSETLMATLEKDHTAGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKDK
RYDLAKVGRYKVNKKLGLTTPYDTGTLTEEDIVSTIEYLVRLHAGEDKMVVGDQTIPVET
DDIDHFGNRRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAI
KEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGMEVRDVHPSHYGRMCPIE
TPEGPNIGLIGSLCSYARVNPFGFIETPYRKVVEGRVTDQVDYLTADEEDRFVKAQANAA
IDADGHFVEDRVLVRKKGGEVELIDPMDVDYMDVSPRQMVSVATAMIPFLEHDDANRALM
GANMQRQAVPLLRNSAPLVGTGVELRAAVDAGDVLVAEQAGVVEELSADLITIMHDDGTR
KSYGLYKFRRSNHGTCFNHRPIVNEGDRVEQGQVIADGPSTENGEMALGKNLLVAVMPWE
GHNYEDAIILSQRLVQDDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSEEVLADLDER
GIIRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGETGKV
IGIRVFSREDDDELPPGVNELVRVYVAQKRKIQDGDKLAGRHGNKGVIGKILPVEDMPFM
EDGTPVDVVLNTHGVPRRMNIGQILELHLGWLASQGWKVEGNPDWAKNLPEELYDVEPGT
NTATPVFDGAKEEELTGLLSATKPNRDGERMVRPDGKAVLLDGRSGEPFPYPVSVGYMYI
LKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLT
IKSDDVIGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIEMRDS
DDEDLERAAANLGINLSRNESPSVDDVVQ
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
ttggcagtctctcccgcgaaccaggccactgctgcgaccacctcggctgaatctgcttcg
gagtcttcagagctcgcgaccatccccggcgcccccaagcgggtgtcgttcgcgaagatt
cgcgagccgctgagcactccgaacctgctggacgtgcagatccggtcattcgaatggttc
accggcgacgaggcgtggttcgaacgccgcgtcgaggaaggcgaagagaacccggtcggc
ggtctggaggaggtcctcaacgagatctccccgatcgaagacttctccggctccatgtcc
ctctccttctccgacccgcgcttcgacgaggtcaaggcctcggtcgaggagtgcaaggac
aaggacatgacgtacgcggcgccgcttttcgtcaccgccgagttcgtcaacaacaacacc
ggcgagatcaagagccagacggtcttcatgggtgacttcccggtgatgaccgacaagggc
accttcgtgatcaacggcaccgagcgtgtcgtggtgtcccagctggtccgctcgcccggt
gtctacttcgactccagcgtcgacaaggccaccgacaaggacgtcttcagcacccgcatc
atcccgagccgcggcgcgtggctcgagttcgacgtggacaagcgcgacaccgtcggcgtc
cgcatcgaccgcaagcgccgccagccggtcaccgtgctgctgaaggcgctcggctggacc
accgaggcgatccgcgagcgcttctccttctccgagacgctgatggcgaccctggagaag
gaccacaccgcgggcaccgacgaggccctgctcgacatctaccgcaagctgcgccccggc
gagccgccgacgaaggagagcgcgcagaccctgctggagaacctgttcttcaaggacaag
cgctacgacctggccaaggtcggccgctacaaggtcaacaagaagctgggcctgaccacg
ccgtacgacaccgggacgctgaccgaagaggacatcgtctccaccatcgagtacctggtc
cggctgcacgccggcgaggacaagatggtcgtcggcgaccagaccatcccggtcgagacc
gacgacatcgaccacttcggcaaccgccgcctgcgcaccgtcggcgagctgatccagaac
cagatccgggtcggcctgtcccgcatggagcgcgtcgtccgcgagcggatgaccacccag
gacgtcgaggcgatcaccccgcagaccctgatcaacatccgcccggtggtggcggcgatc
aaggagttcttcggcacctcgcagctgtcgcagttcatggaccagaacaacccgctgtcc
gggctgacccacaagcgccgcctgtcggcgctcggccccggcggtctgtcccgtgagcgc
gccggcatggaggtccgcgacgtccacccgtcgcactacggccggatgtgcccgatcgag
acgccggaaggcccgaacatcggcctgatcggctcgctgtgctcctacgcgcgggtcaac
ccgttcgggttcatcgagaccccgtaccgcaaggtggtcgagggccgggtcaccgaccag
gtggactacctgaccgcggacgaggaagaccgcttcgtcaaggcgcaggcgaacgccgcc
atcgacgccgacggccacttcgtcgaggaccgcgtcctggtccggaagaagggcggcgag
gtcgagctgatcgacccgatggacgtggactacatggacgtctcgccgcgccagatggtg
tcggtcgcgacggcgatgatcccgttcctcgagcacgacgacgcgaaccgcgcgctgatg
ggcgcgaacatgcagcgccaggccgtgccgctgctgcgcaactcggcgccgctggtcggc
accggggtggagctgcgggccgcggtcgacgccggtgacgtgctcgtcgccgagcaggcc
ggcgtggtcgaggagctctccgccgacctgatcacgatcatgcacgacgacggcacgcgg
aagagctacgggctgtacaagttccgccgctccaaccacggcacctgcttcaaccaccgc
ccgatcgtgaacgagggcgaccgggtcgagcagggccaggtcatcgccgacggcccgtcc
accgagaacggtgagatggcgctcggcaagaacctgctggtcgcggtcatgccgtgggag
ggccacaactacgaggacgcgatcatcctgtcgcagcgcctcgtgcaggacgacgtgctc
acctcgatccacatcgaagagcacgagatcgacgcccgcgacaccaagctcggtgccgag
gagatcacccgggacatcccgaacgtctccgaggaggtgctcgccgacctcgacgagcgc
ggcatcatccggatcggtgccgaggtccgcgacggcgacatcctggtcggcaaggtcacg
cccaagggtgagaccgagctgaccccggaggagcgcctgctccgcgcgatcttcggcgag
aaggcccgcgaggtgcgcgacacctcgctgaaggtgccgcacggcgagaccggcaaggtc
atcggcatccgggtgttctcccgcgaggacgacgacgagctgcccccgggcgtcaacgag
ctggtccgcgtctacgtggcccagaagcgcaagatccaggacggcgacaagctcgccggc
cggcacggcaacaagggcgtcatcggcaagatcctcccggtcgaggacatgccgttcatg
gaggacggcaccccggtcgacgtggtgctgaacacgcacggtgtgccgcgtcgtatgaac
atcggccagatcctcgaactgcacctcgggtggctggcctcgcagggctggaaggtcgaa
ggcaatccggactgggcgaagaacctgccggaagagctctacgacgtcgagccaggcacg
aacaccgcgaccccggtgttcgacggcgccaaggaggaggagctgacgggtctgctgtcg
gcgaccaagcccaaccgcgacggcgagcgcatggtccgcccggacggcaaggcggtgctg
ctcgacggccgctccggcgagccgttcccgtacccggtttcggtcggctacatgtacatc
ctgaagctgcaccacctggtggacgacaagatccacgcgcgctccaccgggccgtactcg
atgatcacccagcagccgctgggtggtaaggcccagttcggtggccagcgcttcggtgag
atggagtgctgggcgatgcaggcctacggcgcggcctacacgctgcaggagctgctcacg
atcaagtcggacgacgtgatcggccgggtcaaggtgtacgaagccatcgtcaagggcgag
aacatcccggagccgggcatcccggagtcgttcaaggtgctgttgaaggagctgcagtcg
ctctgcctcaacgtggaggtcctgtcctccgacggtgcggcgatcgagatgcgcgactcc
gacgacgaggacctcgagcgcgccgcggcgaacctcggcatcaacctgtcccgcaacgag
tcgccctcggtggacgacgtcgttcaatga
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integrated database retrieval system
