Alicyclobacillus acidoterrestris: K1I37_10530
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Entry
K1I37_10530 CDS
T08106
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
aaco
Alicyclobacillus acidoterrestris
Pathway
aaco02024
Quorum sensing
aaco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K1I37_10530 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K1I37_10530 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaco03019
]
K1I37_10530 (hfq)
03036 Chromosome and associated proteins [BR:
aaco03036
]
K1I37_10530 (hfq)
Messenger RNA biogenesis [BR:
aaco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
K1I37_10530 (hfq)
Chromosome and associated proteins [BR:
aaco03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
K1I37_10530 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
UNO47190
UniProt:
T0CKM3
LinkDB
All DBs
Position
2225128..2225385
Genome browser
AA seq
85 aa
AA seq
DB search
MSKQQINIQDTFLNQVRKDRIPVIVYLVNGFQIRGVVRAFDNFTIVVEAEGKQQMIYKHA
ISTFIPMRQVNLAAEAASTDADEQA
NT seq
258 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcagcaaattaatatccaagacacatttttgaatcaagtgcgcaaggatcgg
ataccggtcattgtatatcttgtgaatggctttcaaattcgcggtgtcgtccgcgcgttc
gacaattttaccatcgtcgtcgaggcggagggcaaacagcagatgatctacaagcacgcc
atttccacgtttatcccgatgcgtcaggtgaatcttgcagccgaagctgcgtcgaccgac
gctgacgagcaagcgtaa
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