Aggregatibacter actinomycetemcomitans 624: ACT75_07270
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Entry
ACT75_07270 CDS
T04753
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
aact
Aggregatibacter actinomycetemcomitans 624
Pathway
aact03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aact00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACT75_07270 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aact03021
]
ACT75_07270 (rpoB)
03400 DNA repair and recombination proteins [BR:
aact03400
]
ACT75_07270 (rpoB)
Enzymes [BR:
aact01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACT75_07270 (rpoB)
Transcription machinery [BR:
aact03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACT75_07270 (rpoB)
DNA repair and recombination proteins [BR:
aact03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACT75_07270 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
SPG4
Motif
Other DBs
NCBI-ProteinID:
AMQ94339
UniProt:
A0A5D0EJD3
LinkDB
All DBs
Position
complement(1493265..1497293)
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLNIPYLLTIQIDSFEKFIKRDPDGQQGLEAAFRSVFPIV
STNGNTELQYVSYQLGEPVFDVRECQIRGTTYAAPLRVKLRLVSYDKDAAPGTIKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLYARIDRRRKLPATIILRALGYTTEQILDLFFYKITFEIKDNKLLMT
LVPERLRGETAAFDIEAKGKVYVERGRRITTRHIKALEKDKVTQVEVPTEYIIGKVAAKD
YVDLETGELICPANMELSLELLAKLAQAGYTTLETLFTNDLDYGPYISETLRVDPSNDRL
SALVEIYRMMRPGEPPTKEAAEALFDNLFFSSDRYDLSAVGRMKFNRSLGIEETTGGGTL
SNEDIVSVMKKLIDIRNGRGEVDDIDHLGNRRIRSVGEMAENQFRIGLVRVERAVKERLS
LGDLEAVTPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTR
ERAGFEVRDVHATHYGRVCPIETPEGPNIGLINSLSVYARTNDYGFLETPYRKVVNGQVT
EEIEYLSAIEEGKYVIAQANSNLDDDFRFTDAFVTCRGEHGESGLYKPEEIHYMDVSTQQ
VVSVAAALIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGIEKAVALDSGVAVVAK
RGGTIQYVDASRIVVKVNEDETVAGEAGIDIYNLIKYTRSNQNTCINQIPCVELGDPVER
GEILADGPSTDLGELALGQNIRVAFMPWNGYNFEDSMLVSERVVQQDRFTTIHIQELSCV
ARDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVKGGDILVGKVTPKGETQLTPEE
KLLRAIFGEKASDVKDSSLRVPNSVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKD
LSEEFEILEAGLFTRVRNLLLSGGFDAKSLDKLDRTKWLEQTLDNEEKQHQLEQLAEQHE
ELRKEFERKLEVQRNKIIQGDDLAPGVLKVVKVYLAVKRQIQPGDKMAGRHGNKGVISKI
NPVEDMPYDENGQPVEIVLNPLGVPSRMNIGQILETHLGLAAKGIGDQINAMIKQQQSIA
KLREYMQKAYDLGGGSQKVDLSTFTDEEVMRLAQNLRKGLPVATPVFDGAHEKEIKGLLE
LGGLPISGQITLYDGRTGEKFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVSGNQQMDPGTP
ESFNVIMKEIRSLGINIDLDEE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgaattcgtaaagacttcggcaaacgtccgcaa
gttttaaatattccctatttattaacaatccagatcgactcttttgagaaatttattaaa
agagatccggatggtcaacaaggcttagaagccgctttccgctccgtcttcccaattgtc
agtacgaacggaaataccgaattacaatatgtcagctatcaattaggcgagcctgtattt
gatgtgcgtgaatgtcaaattcgcggcacgacctatgcggcaccattgcgtgtaaaattg
cgtttagtcagctatgacaaagacgcagcaccgggtactatcaaagatattaaagaacaa
gaagtttacatgggtgaaatcccgttgatgaccgataacggtacttttgtgattaacggt
accgagcgtgttattgtgtctcaattacaccgcagtccgggtgtattttttgatagcgac
aaaggcaaaacccactcttcaggtaaagtgctttataatgcacgcattattccttaccgt
ggttcatggttggattttgagtttgatccgaaagataacttatacgcacgtattgaccgc
cgtcgtaaattaccagcaaccattattttgcgtgctttaggctacaccaccgaacaaatc
ttagatcttttcttttataaaattacttttgaaatcaaagataacaaattgttgatgacg
ttagtgccggaacgcttacgtggtgaaaccgccgcctttgatattgaagccaaaggcaag
gtgtatgtagaacgcggtcgtcgtattaccacccgtcacattaaagcgttggaaaaagat
aaagtcactcaggtggaagtgccaaccgaatatattatcggtaaagttgccgcgaaagat
tatgtagatttagaaaccggcgaattaatttgtccggcgaatatggaactttctcttgaa
ttattggcaaaattggcacaagccggttataccacgctggaaactctatttaccaatgac
ctggattacggtccgtacatttccgaaaccctgcgtgtcgatccgtcgaacgatcgttta
agcgctttggtggaaatttatcgcatgatgcgtccgggcgaaccaccgacaaaggaagcg
gcggaagcgttattcgataatttattcttctcttccgatcgttatgacttatctgcggta
gggcgcatgaaattcaaccgctctttaggcattgaagaaaccactggtggtggcacctta
agcaatgaagatattgtcagtgtgatgaaaaaattgattgatatccgtaatggccgtggt
gaagtggatgatattgaccacttgggtaaccgtcgtattcgttccgtaggtgaaatggcg
gaaaatcaattccgtatcggcttggttcgtgttgaacgcgcggtaaaagaacgcttatct
ttaggtgatctggaagctgttaccccgcaagatctaatcaatgcgaaaccgatttccgcc
gcggtgaaagaattctttggttcatcccaattgtctcaatttatggaccaaaacaacccg
ttatcggaagtgacccataaacgccgtatttccgcattgggtccgggcggtttaacccgt
gaacgtgcgggttttgaagtgcgtgatgtacacgccacccactacggtcgcgtgtgtccg
attgaaacccctgaaggtccgaacatcggtttgatcaactccctttccgtttatgcgcgt
actaacgactacggtttcttagaaactccgtaccgtaaagtagtaaatggtcaggtgacc
gaagaaatcgaatatttgtctgccattgaagaaggcaaatacgttatcgcacaggcgaac
tccaatcttgatgatgatttccgctttaccgatgcctttgtaacttgtcgtggtgaacat
ggtgaatccggcttatataaaccggaagaaattcactatatggacgtttctacccaacaa
gtggtttccgtggcggcggcattaattccgttcctggagcatgacgatgcgaaccgtgct
ttgatgggggcgaacatgcaacgtcaagccgtgccaacattgcgtgcggacaaaccgtta
gtcggtacaggtatcgaaaaagcggttgcccttgactccggtgtggcagtcgtggcaaaa
cgcggtggtaccattcaatatgtagatgcttcccgcatcgtggtgaaagtcaatgaagac
gaaactgtcgcgggcgaagccggtattgatatttataacctcattaaatatacccgttcg
aaccaaaatacctgtattaaccaaattccttgcgtggaattgggcgatccggtggaacgc
ggtgaaatcttggcagacggtccttccaccgatttaggtgaattggcgttaggtcaaaat
attcgcgtagctttcatgccgtggaacggttataacttcgaagactccatgttagtctcc
gaacgtgtggttcaacaagatcgcttcaccacgattcacatccaagagctgtcttgtgtg
gcgcgtgataccaaattaggcgcggaagaaattaccgcagatattcctaacgtcggtgaa
gccgcactaagtaagttggacgaatccggtatcgtgtatatcggtgcggaagtgaaaggc
ggcgatattctggtaggtaaagtgacaccgaaaggtgaaacccaattaacgccggaagaa
aaattattgcgtgcgatcttcggtgaaaaagcctccgatgtgaaagactcttctctacgc
gtaccaaacagcgtttccggtacggttatcgatgtgcaagtgtttacccgcgatggtgtg
gaaaaagacaaacgtgcgttagaaattgaagaaatgcaattaaaacaagcgaaaaaagat
ttgagcgaagagtttgagatcttggaagccggcttgtttacgcgcgtacgcaatctgttg
ttatccggcggtttcgatgcgaaatccttggataaattagaccgcactaaatggttggaa
caaactttagataacgaagaaaaacaacaccaattagagcagttggcggaacagcacgaa
gaattacgcaaagaatttgaacgtaaattggaagttcaacgcaacaagattatccaaggc
gacgatttggcaccgggcgtgttgaaagtggttaaagtgtatcttgcggtgaaacgtcaa
attcaaccgggtgataaaatggcgggtcgtcacggtaacaaaggggttatctccaaaatt
aacccggtggaagacatgccatacgatgaaaacggtcaacctgttgagatcgtattgaac
ccgctgggcgttccgtcccgtatgaatatcggtcaaatcttggaaactcacttaggtttg
gcggcgaaaggtattggcgatcaaattaacgcgatgattaaacaacaacaatctatcgcg
aaattgcgtgaatatatgcaaaaagcctatgaccttggcggcggttcgcaaaaagtggat
ctcagcacctttaccgatgaagaagtaatgcgtttggcgcaaaatctgcgtaaaggtttg
ccggttgctacaccggtatttgatggtgcacatgaaaaagaaatcaaaggcttattagag
cttggtggtttaccgatttccggtcaaattaccctttatgatggtcgcacaggtgaaaaa
ttcgagcgtccggtaaccgtaggttacatgtatatgctcaaattgaaccacttggttgat
gacaaaatgcatgcgcgttcaaccggttcttatagtcttgttacccaacaaccgttgggc
ggtaaggcgcaattcggtggtcaacgtttcggtgagatggaggtatgggcacttgaagct
tatggtgcggcttataccttacaagaaatgttaaccgtgaaatccgatgacgtgaacggt
cgtacgaagatgtataaaaacatcgtcagcggcaaccaacaaatggatccgggtacaccg
gaatctttcaacgtaatcatgaaagaaatccgttcacttggtatcaacatcgacttggac
gaagaataa
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