Anas acuta (northern pintail): 137854614
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Entry
137854614 CDS
T11380
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
137854614 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aacu03400
]
137854614 (LIG4)
Enzymes [BR:
aacu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
137854614 (LIG4)
DNA repair and recombination proteins [BR:
aacu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
137854614 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137854614
NCBI-ProteinID:
XP_068534363
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Position
1:complement(59574434..59578512)
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AA seq
978 aa
AA seq
DB search
MRGRRAPPLPPPLRVGPNHCVCGAGGGGERPADTAAAALLPFRSKGPRGGRRGCGFHRRF
TGSTEEGSRMASPQPPPRRTVASHVPFADLCATLERMQACKTRPEKTKYFRDFLDSWRKF
HHALHQKEKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDAAKL
LNYRTPAGSRGDAGDFAMIAYFVLKPRSPKRGRLTVEQVNELLDAIANNNAARNKGQLKK
SLLQLITQSTALEQKWLIRMIIKDLKLGISQQTIFSIFHPDAVELHNVTTDLEKVCRQLH
DPTVSLSDVSITLFSAFKPMLAAIADVQQIEKQMNNQTFYIETKLDGERIQMHKDGDVYK
YFSRNGFDYTQQFGASPLDGSLTPFIHSVFKDNIQNCILDGEMMAYNPETQTFMQKGNKF
DIKRMVEDSDLQTCFCVFDVLMVNDQKLGHEALSKRYEILSNVFTPVTGRIHVVHKKTAR
TRKEVIDALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGG
YWGKGLRGGMMSHFLCAIAETPAPNEKPTVFHSICRIGSGYTMKELHDLGLKLAKHWKPY
HRRDPPCNILCGIEKPEVYIEPCNSVIVQVKAAEIVNSDMYKTDCTLRFPRIEKIREDKE
WYECMTLDMLADLRSRAEGKLASKHLHIDEYDEPQEKKRKTVSKVKKVIGIAEQFKAPDL
SNVNKVSNVFEDVEFCVMTGTGKHSKSELESRIAECGGSVVQNPGPDTYCVIAGAENVRV
KNIIASNKYDVVKAEWLLQCFQSKMLVPWQPAVMIHMSPDTKEHFAREYDCYGDSYTADT
DVAQLKEVFSRMKDNKIMPLDVIAELEERYSWNSCQLSIFRGNTIYVDCYAVVNEPRTKI
HGTRLSIRALELRFYGAKVVSCLEEGVSHVIIGEDHSRVEEMKALRRTFGKKFKIVSELW
VTESVKEGVPKNENQYLI
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggccgccgcgctccccctctcccccctcccctccgcgtcggaccgaaccactgc
gtgtgtggggccgggggggggggggagcgcccggccgacaccgccgccgccgcgctcctc
cccttccggagcaaagggccgaggggcggccgccgcggctgcgggtttcaccggcgcttc
accggctccaccgaggaagggtctcggatggcttccccgcagccgcctcctcgcaggacg
gtcgcctcgcacgtgcccttcgcggacctgtgcgccaccctggagcggatgcaggcctgc
aagacccggccggagaaaaccaagtacttcagggacttcctggactcgtggagaaagttc
caccacgctcttcaccagaaggagaaggacgtcaccgattcgttttatccggccatgcgg
ctcattctgccgcagctggagagggagaggatggcgtacgggattaaggaaaccatgctc
gccaagctgtacatcgagctgctcaatttgcccaaagatgggaaggacgccgcgaagctt
ttaaactacaggacgcctgccggttcgcgtggggatgctggagactttgccatgattgca
tactttgtcttaaaacctaggagccccaaacgaggcaggctgacagtggaacaggtcaac
gaactgttagatgccatagctaacaataatgctgctagaaacaaggggcagttaaagaaa
agccttcttcagttaattacccagagcacagcgcttgagcaaaagtggctcatccggatg
attataaaggatctaaaactgggtattagtcaacaaactatattttccatttttcatccc
gatgctgttgaattacacaatgtcacgacagatttggaaaaagtttgtagacaactgcat
gatcccactgtctcacttagcgatgtttctatcacgttattttctgcctttaagccgatg
cttgctgctattgccgatgtccagcaaattgagaaacaaatgaataaccagacattctac
atagaaactaaactggacggtgaacgtatacagatgcacaaagatggtgatgtgtataaa
tatttttccagaaatgggtttgactatactcagcagtttggtgcttccccccttgatggc
tcgttaacaccatttattcatagtgtatttaaagacaacatacaaaattgcattcttgat
ggtgaaatgatggcttacaatccggagacacaaaccttcatgcaaaaaggaaacaaattt
gacataaaacgaatggtggaggactctgatctgcagacctgcttctgtgtgtttgatgtg
ctgatggttaatgatcagaagttgggtcatgaagcactgagcaaaaggtacgagatctta
agcaacgtatttaccccagtaacaggcaggatacatgtcgtacataaaaaaactgccaga
acgagaaaagaagtaattgatgctttaaatgaagcaatcgataacagagaggaagggatt
atggtcaaagatcccatgtccacgtacaagcctgacaaacgtggggaaggctggttaaaa
atcaagccggaatacgtcaatgggctgatggacgagctcgaccttctgatagttggtggt
tactggggaaagggtttacgtggtggaatgatgtctcattttctgtgtgcgattgcagag
actcccgctccaaacgaaaaacctactgttttccactctatttgtcgcattggctctggc
tacactatgaaggaattgcatgatctgggtttgaaactggctaaacactggaagccctac
cataggagggaccctccctgtaacattttgtgtggcattgaaaaacctgaagtgtacatc
gaaccttgtaactccgtcatcgttcaggtcaaggcagctgagattgttaacagtgatatg
tacaaaactgactgtaccttgagattcccccgaattgagaaaataagagaggacaaagaa
tggtatgaatgcatgactttggacatgcttgcagatctcagaagtagagcagaagggaag
ctggcatccaagcaccttcatattgacgaatatgatgagccgcaagagaagaaaaggaaa
actgtatcgaaggtgaagaaggtaatcggaatagccgagcaatttaaagctcctgatctt
tctaatgtaaacaaggtttcaaatgtgtttgaagatgtagagttttgtgttatgacaggt
acaggaaaacactccaaatctgaactggaaagccgaatagccgaatgtggtgggagtgtg
gtacagaaccctggaccggacacttactgtgtcatcgcgggagctgagaacgtcagagtg
aaaaacatcattgcttccaacaaatacgatgtggtgaaggcagagtggcttctgcagtgt
tttcagtccaaaatgcttgtgccttggcagccagccgttatgattcacatgtctcctgac
actaaagaacattttgctcgtgagtatgattgctatggagacagctacacagcagataca
gatgttgcacaactcaaggaagtattctcaagaatgaaggataataaaataatgcccttg
gacgtgattgctgagttagaagaacgttactcatggaacagctgtcaactcagtatattc
agaggaaacactatttatgtggactgttatgctgttgttaatgaacccagaaccaaaatc
cacggaacaagactatcaattagagctttggagctccgtttttatggggcaaaagtagtc
tcttgccttgaagaaggtgtctcccatgtcattataggagaagatcattctcgggtagaa
gaaatgaaagcactcaggagaacatttgggaaaaaatttaagattgtatctgagctgtgg
gtaacagagtcggtgaaggagggagtcccaaagaatgaaaatcagtacttgatttaa
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