Anas acuta (northern pintail): 137862157
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Entry
137862157 CDS
T11380
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137862157 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aacu03019
]
137862157 (CNOT1)
Messenger RNA biogenesis [BR:
aacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137862157 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
137862157 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137862157
NCBI-ProteinID:
XP_068549972
LinkDB
All DBs
Position
10:complement(12382216..12440540)
Genome browser
AA seq
2384 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVIK
LSKVQEVIFGLALLNSFSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLDFKVVTYE
LDHPGFQIRDSKGLHIVVFGIQRGLGMEVFPVNAIYRPWKHAEGQLSFIQHSLINPDIFC
FADYACHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSSVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDSLAGMASL
SLGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTGFSGIGGLSSQLPVGG
LTTGSLTGIGTGALGLPAVNNDPFVQRKLSTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPIAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVA
AHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQRDMMEQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQQAWATDDVAQIYDKCMTEL
EQHLQSIPHTLAMNPQAQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADAD
LLLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNM
QQYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSR
GNAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREW
VNLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYR
AQAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVG
VLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAP
GFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILY
KGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKV
DMLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNI
QLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIAN
QLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKN
PAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7155 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaacaggcacggt
cccgaggcagacaggcatttactacgctgcctattctcgcacgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagactcaatttctgatccaggagtgtgcgtcg
ctgattacgaaaccaaactttatctcgacgctgtcctacgccattgacaatcccttgcac
tatcagaagagtctaaagccttcaccccatttatttgcccaattgagtaaagtcatcaaa
ttaagtaaagttcaagaggtgatattcggtctcgctttactgaactctttcagctcagat
ctacgaggttttgctgcccagttcatcaaacagaaactcccggatcttttgcgctcttac
attgacgcggacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ctgcaccttctcctctcccatctcctttttgggcagaagggagcgtttggggtgggacag
gaacaaattgacgctttcctcaaaacattacgtagagattttccccaggagcgttgtcct
gtggtgcttgcaccacttctataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagccaaaacaatgatggagagttctctggcagacttcatgcaa
gaagttggctatggcttttgtacaagtgttgaagaatgtcgcaacataatcatgcagttt
ggtgtccgggaagtcacagctgcccaggttgccagggttttggggatgatggctcgaact
cattcagggttgacagatggtattccattacaatctatttcggctcctggcagtgggatt
tggagtgatgggaaggataaaagtgacggagcacaagcccatacctggaatgtggaggtc
ttaattgatgttcttaaagagttgaatcctagcctggacttcaaagtagtaacctatgaa
ttggaccacccgggatttcagattcgtgacagcaagggcctgcatattgtggtgtttggc
atccagagaggcttgggcatggaggtttttccagttaatgccatatacagaccttggaaa
catgcagagggccagctctccttcattcaacattccctcataaaccctgacatcttctgt
tttgctgactacgcttgtcatactgttgccacagacatcctgaaagcaccaccagaggat
gacaatcgagaaattgctacatggaagagcctggatttgatcgaatctctgttgcgattg
gcagaagtgggacagtacgagcaggttaagcagctcttcagttttcctatcaagcattgc
ccggatatgttggtattggccttattgcagatcaacacttcctggcataccttgcgccat
gaactcatctccacgctcatgccgattttccttggcaaccatcccaactcagccatcatt
ttgcactatgcatggcatggacagggtcagtctccttcgattcgtcagcttatcatgcat
gcaatggcagaatggtacatgagaggggagcagtatgaccaggcaaaattgtcacgtatt
cttgatgtggcgcaagacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggaacatggggagcccttcatccaggcctgcatgactttctta
aagagaagatgtccatctatcttgggtggccttgctccggaaaaagatcaacccaaaagt
gctcagcttcctccagaaaccttggcgactatgttggcgtgtctgcaagcttgtgctggg
agtgtttctcaggagctgtcagagacaatactcaccatggtggcgaactgcagcagcgtc
atgaacaaggctaggcagccgccacctggagtcatgccaaagggacgcccacccagtgcg
agcagcttggatgccatctctcctgtacagatcgactcgcttgcgggcatggcatctctt
agtttaggtggctcggctgctcctcatacccagagcatgcaaggcttccctccgaacttg
ggctctgcgttcagtactccacagtcaccagcaaaagcgtttccccctctttccacccaa
aaccagacaacaggtttcagtggcattggaggactctcttcacaacttccagtaggtggt
cttactacgggtagcctgactggtataggaactggagccctgggcctccctgcagtgaac
aatgacccattcgtgcaaaggaagctgagcacatctggactgaaccagcctacattccag
cagagtaagatgaaaccttctgacttatctcaggtgtggccagaggctaaccagcacttt
agcaaagaaatagatgatgaggcaaacagctacttccagcgtatttataaccatccacca
catccgaccatgtctgtagatgaggtcttggaaatgctgcagaggtttaaggactccaac
ataaaacgggaacgagaagtgtttaactgcatgctgaggaatttgtttgaggaataccgt
ttctttccccagtacccagataaagagctgcacataacagcctgcctctttggtgggata
atagagaaaggactggttacttatatggcattgggcctggccctgcgctatgttcttgaa
gccttacgaaagccttttgcatccaaaatgtactattttggtattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctattagtcac
tttatacagttccctcatcacttacaggagtacatagaatacggacagcagtctagagat
cctcctgtgaagatgcagggatcaatcaccacccctggaagtattgcacttgcccaggct
caggcccaggcccaagttccagcaaaagctcctattgctggccaagtcagcactatagta
accacctcaaccaccaccactgttgcaaaaaccatcacaatcactcgaccaactggagtc
agcttcaagaaagatgtgccgccttccattaataccaccaatattgatacgctgttagta
gcaacagatcaaactgagagaattgtggaaccaccagaaaatgtccaggaaaaaattgct
ttcatcttcaataatctgtctcagtcaaacatgactcagaaggttgaagaactgaaggag
acagtgaaagaagagttcatgccttgggtatcgcagtatctcgtgatgaaaagagtcagt
attgagccaaattttcacagcttatattcaaacttccttgacactcttaagaatccagag
tttaataaaatggttctgaatgaaacttacagaaacatcaaggtgctactgacatcagat
aaagctgcagccaacttctcggaccgttccttgttaaagaaccttggtcactggctggga
atgattacactggctaaaaataagcccatcttgcacacggatttggacgtgaaatcgctg
ctactggaagcatatgttaagggacagcaggaattgctttatgtagtaccatttgttgcc
aaagtcttagaatccagtgtcaggagtgtggtcttcaggcctccaaacccgtggacgatg
gccattatgaatgttttagctgagctacatcaagaacatgacctaaaattgaatctaaag
tttgagattgaagtgctctgcaagaatcttgcattagacatcaatgagttgaaacctgga
agtctcctgaaagacaaggatcgcctgaaaaatctggatgagcagctctctgctccaaag
aaagatgtgaagcagccagaagagctaccacccatcacaacaactactgcttctacaact
ccagctaccagcaccacttgtacagccacggttcctccacagccccagtacagttaccat
gacatcaacgtctattctttaggagggttggctccacacattaccttaaatcctacgatc
ccgctgttccaggcccacccccagctgaagcagtgtgtgcggcaggctattgagcgagca
gtgcaagagctcgtccatcctgtggtcgatcggtccatcaagattgccatgacgacgtgc
gaacagatagtcaggaaggattttgcactggattcggaggagtcgcggatgcgtgtggcc
gcacaccatatgatgcggaacctgactgccgggatggccatgattacctgcagggaacct
ttgctcatgagcatagctaccaacctgaagaacagctttgctactgcgctgagggcagcc
tccccacaacagagggacatgatggagcaagcagctgcccagctagcacaggataactgc
gagctagcatgctgctttatccagaagacagctgtggaaaaagcaggccctgaaatggac
aagaggctagcaactgaatttgagctcagaaaacatgctagacaagagggtcgtcggtac
tgtgatcctgttgtgttaacttaccaagctgaacggatgccagaacagatcaggttaaag
gttggaggtgtggacccaaaacagctggctgtttacgaagagtttgcacgcaatgtccct
ggcttcttgcctaccaatgacttaactcagcctacgggattcttggctcagcctatgaag
cagcaagcttgggctacagacgatgtggcacaaatctatgacaagtgtatgacagaactg
gagcaacacctgcagtccattccacataccctggccatgaatcctcaggctcaagctctg
cgcagcctcttggaggccgtagtagtggctcgtaactcccgtgatgctatcgctgcgctt
gggctgctgcagaaggctgtagagggcttactggatgccaccagtggggcagatgctgac
ctcctgctgcgctaccgtgagtgtcatctgcttgtgctgaaggctctgcaggacggtcgt
gcatatggatctccgtggtgtaataaacagattactaggtgcctgattgaatgcagggat
gagtacaagtacaacgtggaagctgtggagctgctaatccgcaatcaccttgttaatatg
cagcagtacgatcttcacttggctcagtcaatggagaacggcttgaactacatggctgtg
gcgttcgccatgcagttggtaaagatcctgttggtggatgagagaagtgtcgcgcatgtt
acggaggcagacctgttccacacgatcgagacacttatgaggattaatgctcattccaga
ggaaacgccccagaaggattaccccagctaatggaagtggtccgatcaaattatgaagcc
atgattgaccgtgctcacggaggtcccaatttcatgatgcattctggaatttcccaagcc
tctgagtatgatgatccgccaggtctgagggagaaggcagaatacctgctgagggagtgg
gtgaacctctaccattcagctgcagcgggccgcgacagtaccaaagcgttctctgcgttt
gttggacaggtagagcttttggaaagaaagatgcaccagcaaggaatcctgaaaacggat
gatctgatcacccgctttttccgtctttgtaccgaaatgtgtgttgaaatcagctaccgt
gctcaggctgagcaacagcacaaccctgctgccaaccccactatgattcgagccaagtgc
taccacaatctggatgcctttgtgcgacttattgcactgctggtgaagcactctggagag
gcaaccaacaccgttacaaagatcaacctcctgaacaaggtccttggtattgtggtggga
gttcttctgcaagaccacgacgttcggcagagtgagtttcagcagcttccttaccatcgc
atcttcatcatgttgctgttggaattaaatgctcctgagcatgtgctggaaaccatcaac
ttccagacactcacagctttctgtaacacatttcacatcctgaggcctacaaaagctcca
ggttttgtttatgcctggctggaactgatctcccaccggatatttattgcaagaatgctg
gcacatacaccacagcagaagggttggcctatgtatgcccagttactgatcgatcttttc
aagtacttggctcctttccttagaaacgtggaactcaccaaacctatgcaaattctttac
aagggcactctgcgtgtgttgctggtcttgttgcatgatttcccagaatttctttgtgac
taccactatgggttctgtgatgtgatcccacccaactgtattcagctaaggaatctgatc
ctgagtgccttcccacggaacatgaggcttccagaccctttcacccccaatctaaaggtg
gacatgttaagtgaaattaatattgctccacgaatactcaccaatttcactggagtgatg
ccgccacagttcaagaaagatttggattcctatctcaaaacccgttctccagttactttt
ctgtctgacttgcgcagcaacttacaagtatcaaatgaacctggcaaccgctacaacatc
cagctgattaatgcactggtgctctacgtaggtactcaagctattgcgcacatccacaac
aaaggcagcacaccgtccatgagcaccattacccactcagcgcacatggacatcttccag
aatttggctgtagacctggacactgaaggtcggtacctcttcttgaacgcaatcgccaac
cagctgcgatatcccaacagtcacacccactacttcagttgcaccatgctttacctgttt
gcagaggccaacactgaggctatccaggagcagatcactagggttctcttggaacgactg
attgtaaataggcctcatccctggggtctccttattactttcattgagctgataaaaaat
ccagcgtttaaattctggaaccatgaatttgttcactgtgctccagaaattgagaagttg
ttccagtcggttgcacagtgctgcatggggcagaagcaggcccagcaagtgatggaaggg
acgggtgccagttag
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integrated database retrieval system
