Anas acuta (northern pintail): 137862534
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Entry
137862534 CDS
T11380
Symbol
PBRM1
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137862534 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aacu03021
]
137862534 (PBRM1)
03036 Chromosome and associated proteins [BR:
aacu03036
]
137862534 (PBRM1)
Transcription machinery [BR:
aacu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137862534 (PBRM1)
Chromosome and associated proteins [BR:
aacu03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
137862534 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137862534
NCBI-ProteinID:
XP_068550814
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Position
11:14638026..14697591
Genome browser
AA seq
1654 aa
AA seq
DB search
MRRLAFRGAGCTLKKLDSMGSKRRRATSPSSSVSGGDFDDGHHSTNVPGPSRKRRRLSNL
PTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKL
KMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDADEED
EDEEGHEQGTELSSPGYLKEILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPDYYAII
KEPIDLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFNMKK
AEIEHSELAKSSLRIRTPSNLTASKLTGPSSQGKGSVGDERNSSNKYYRNKRSAQGDRLS
AITMALQYGSESDEDAALAAAARYEEGESEAESITSFMDTSNPLYQLYDTVRSCRNNQGQ
LISEPFFQLPSKKKYPDYYQQIKTPISLQQIRMKLKNHEYETLDQLEADLNLMFENAKRY
NVPNSAIYKRVLKMQQVMQAKKKELARRDDIEDGDSMISSATSDAGSSKRKSKKNMRKQR
MKILYNAVLEARESGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDKYVG
EEAMIEDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKRKELGPLPEDDDVASPKLKLS
RKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYVTIKK
PVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRE
IEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPPLTF
DIIRKNVESNRYRRLDLFQENMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKN
GEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGSAGLSS
LHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPN
ETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVYVCESR
YSAKTKSFKKIKLWTMPVSSVRFVPRDVPLPVVRVASVFANTDKAEEEKHSETLEDSKVG
ESILHLEKDKEDVPVEMSNGEPGCHYFEQLCYNDMWLKVGDCVFIKSHGLVRPRVGRIEK
MWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCAVLSFKDF
LSCRPTEISENDVFLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKEP
SPLLEKKIQQLEAKFAELEGGDEDIEEMGEEEGDITETPSMPQLQTPLASELDIMPYTPP
QSTPKSVKGSTKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLE
ATKKAEYEERAAKVAEQQERERAAQQQNPSPRAGTPVGALMGVVPPPTPMGMLNQQLTPV
AGVIGQNVSPMVGTPAPGASPFGQQIGILGPPGQQAPPPYPGQSPASQPVMQQPSTPMFV
SPPPKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKS
KGAHTTMADALWRLRDLMLRDTLNIRQAYNIENV
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggctggcttttcgaggtgctggttgtactctgaagaagttggattccatgggt
tccaagaggcgaagagcaacctcgccgtccagcagcgtcagcggaggagactttgatgat
ggccaccactccacaaacgtaccaggccccagcagaaagaggaggaggctctccaatctc
ccaactgtagatcctattgctgtatgccatgaactctacaacaccatcagagattacaaa
gatgaacagggcaggctcctttgtgagcttttcattagggcaccaaagcgaagaaatcaa
ccagattattatgaagtggtttctcagccaattgatttaatgaaaatccaacaaaagcta
aagatggaggagtatgatgacgtgaatgttctgactgctgattttcagcttctctttaac
aatgcaaaggcttactataagcctgattctcctgaatataaagctgcctgcaaattatgg
gagttgtatttgcgcacaaaaaatgaatttgttcaaaaaggggatgctgatgaggaggat
gaagatgaggaaggacacgaacagggcacagaactatcatctccaggttacctcaaggag
attcttgaacagcttcttgaagctgtagctgttgccacaaacccatcaggacgcctcata
agtgaactgtttcagaaacttccatctaaagtgcaatatccagattattatgcaataata
aaagagcccatagatcttaaaactatcgcacaaaggatacagaatgggacttacaaaagc
attcatgcaatggccaaggatatagatcttctcgcaaagaatgccaaaacctacaatgag
cctggatcacaagtgttcaaggatgcaaatgcaattaaaaaaatatttaatatgaaaaaa
gctgaaattgaacacagtgagttggccaagtcaagtctccgaatcaggactccatcaaat
ttgactgcttccaagctgacaggtccttcctcacagggtaaaggcagtgttggtgatgag
agaaattcttctaacaaatattatcgtaacaaaagatcagcccagggggatcgtttatca
gcaattactatggcattgcagtatggatcagaaagtgatgaggatgcagctttggctgct
gctgctcgttatgaagaaggagaatctgaagctgagagcattacttctttcatggacact
tctaatcctctttatcagctttatgatacagttagaagttgccgaaataatcagggccag
ctcatatctgaaccctttttccagttgccctctaagaaaaagtatcctgattattaccag
caaattaaaacacctatttcattgcagcagatcagaatgaaactgaagaaccatgaatat
gaaaccttagatcagctggaggctgatctgaacttaatgtttgaaaatgccaagcgctac
aatgtccccaattctgccatctataagagagtactgaaaatgcagcaagttatgcaggca
aagaagaaggagcttgctaggagagatgacattgaggatggtgacagtatgatttcttct
gctacatcggatgctggaagctcaaaaaggaaaagtaaaaagaatatgcgaaagcaacga
atgaagatcttatacaatgcagttctggaagctcgagaatcaggcacaggcagacggctc
tgtgatctgtttatggttaagccatccaaaaaggactatccagattattataaaattatc
ttagagccaatggatttgaaaatgattgaacacaacatccgcaacgataagtatgtaggg
gaagaagcaatgattgaagatatgaagctcatgttccgaaatgcaaggcattataatgag
gaaggctcccaggtatacaacgatgcccatatgctggaaaagatccttaaagaaaaaagg
aaagaactgggacccctacctgaagatgatgatgttgcatctcctaaactaaagctaagt
agaaaaagtggcatttctcctaaaaaatcgaaatatatgactccaatgcagcagaaattg
aacgaagtgtatgaagcagttaagaattacacagataaacgaggcaggcgactgagcgcc
atcttcttgaggctgccatctaggtctgagcttcctgactattacgtaaccattaaaaag
ccagttgacatggaaaagatcagaagtcatatgatggccaataagtaccaggatattgat
tccatggtagaagactttgtaatgatgttcaataatgcttgcacctacaacgaaccggaa
tctttgatttataaagatgccctggtcttacataaagttttgcttgaaactcggagagag
atagaaggagatgaggattctcatgtgcccaatgtcactttgctaattcaggaactcatc
cataacctttttgtatctgttatgagccaccaggatgatgagggcagatgctacagtgat
tccttagctgagattcctgctgttgatcccaacttcccaaataaacctcctctgactttt
gatattatccgaaagaatgttgaaagtaatcgctatagaagactggacttgttccaggag
aatatgtttgaggtactggagcgggcaagaaggatgaacaggacggattcagagatttat
gaagatgcggttgaacttcagcagttcttcattaaaattcgagatgaactttgtaaaaat
ggagagattcttctgtcacctgctctcagctataccaccaagcaccttcacaatgacgta
gaaaaagaaaagaaggaaaagctgcccaaagaaatagaggaggataagctcaaaagagag
gaggagaagcgagaagctgaaaagagtgaagattcctctggctcagctggattgtcaagt
ttgcatcggacctacagccaggattgcagcttcaagaacagcatgtaccatgtaggagat
tatgtctatgtggagcctgctgaagccaacttgcaacctcacatagtctgcattgagagg
ctgtgggaagattctgctggagagaaatggctgtatggctgttggttttatcgaccaaac
gaaacgtttcatcttgcaacacggaagttcttggagaaagaggtttttaaaagtgactat
tacaataaagttccagttagcaaaattttgggcaaatgcgtggtcatgtttgtaaaggaa
tattttaaattgtgtcctgaaaactttagagatgaggatgtctatgtatgtgagtcacgt
tattctgcaaagacaaaatcttttaaaaaaattaaactgtggactatgcctgtaagctct
gtaagatttgttccacgagatgtgcccctccctgtggtccgtgttgcttctgtgtttgct
aatacagacaaagcagaggaagagaaacactctgaaacattagaagacagtaaggtggga
gaaagtatccttcatcttgaaaaggacaaagaagatgttccagtagaaatgtccaatgga
gaacctggttgtcattacttcgaacagctctgttacaatgatatgtggcttaaggttgga
gactgtgtcttcataaaatcacatggattagtgcgacctcgggtaggaagaattgaaaag
atgtgggtgcgagacggagctgcatatttctttggtccaatctttatccatcctgaagaa
actgaacatgaaccaactaaaatgttctacaagaaggaagtgtttttaagtaacttggag
gagacctgtcctatgacttgcattttggggaagtgtgctgttctgtcgttcaaggacttc
ctctcctgcaggccaacagaaatttctgaaaatgatgtttttctttgtgagagccgctac
aatgaaagtgataaacaaatgaagaaatttaaggggctcaagaggttttcactttctgca
aaagttgtcgatgatgaaatatactattttagaaaacccatagttcctcagaaggaacca
tctccacttctggagaagaagatccagcagctagaagcaaaatttgctgagttggaagga
ggtgatgaggacatagaagagatgggagaagaggaaggtgacatcactgaaacaccttct
atgcctcagcttcagaccccattagctagtgaattggatataatgccttatactccacca
cagtccactcccaagtctgttaagggcagcaccaagaaggagggatcgaaaaggaagatc
aacatgagtggttacatcttatttagcagtgagatgagagctgtgattaaagctcagcac
ccagactattcctttggagagctcagcaggcttgtaggaactgaatggagaaacttggaa
gcaacaaagaaagcagaatatgaagagcgggcagctaaagttgctgagcagcaggagaga
gagcgagcagcacagcagcagaatccctccccccgggcaggcactcctgtcggggctctt
atgggggtggtgccgccaccaacaccaatggggatgctcaatcagcagttgacacccgtt
gcaggtgttataggccaaaatgtgtcccccatggtaggcactccagcacccggagcaagt
ccgtttggacagcagataggaatccttggcccgccaggacagcaggcgccccctccgtat
ccgggccagagcccagcaagtcagccggtcatgcagcagccctcaactcccatgtttgtc
tcccctccaccaaagacacagaggcttcttcattctgaagcctatctgaaatacatcgag
gggcttagtgctgaatcaaatagcatcagcaagtgggaccagacccttgcagcacgacgg
cgagatgtccacttatcaaaagaacaagagagccgtctcccgtcacactggttgaaaagt
aaaggggctcacaccaccatggccgatgcgttatggcgtcttcgagacctgatgctacga
gacaccctcaatatccgtcaggcatacaatatagaaaatgtttag
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integrated database retrieval system