Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_1431
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Entry
TC41_1431 CDS
T01821
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Pathway
aad02024
Quorum sensing
aad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TC41_1431 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TC41_1431 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aad03019
]
TC41_1431 (hfq)
03036 Chromosome and associated proteins [BR:
aad03036
]
TC41_1431 (hfq)
Messenger RNA biogenesis [BR:
aad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
TC41_1431 (hfq)
Chromosome and associated proteins [BR:
aad03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
TC41_1431 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
AEJ43367
UniProt:
F8IIN5
LinkDB
All DBs
Position
1411912..1412172
Genome browser
AA seq
86 aa
AA seq
DB search
MSKSSVNIQDTFLNQVRKERIPVIVYLVNGFQIRGLVRAFDNFTIVVETDGKQQLIYKHA
ISTFAPMRAVSLVQPEPSAEADQPAE
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagtcgtcagtcaacattcaggacacatttctcaatcaggtgcgcaaagagcga
ataccggtcatcgtgtacctggtgaacggttttcaaatccgcggactggtccgcgcgttc
gacaacttcaccatcgtcgtggagacggacggcaagcagcagctcatctacaagcacgcc
atctccacgttcgcgcccatgcgggcggtatcgctcgtgcaacccgaaccaagtgcggag
gctgatcagccggcggaataa
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integrated database retrieval system
