Acidihalobacter aeolianus: BJI67_11495
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Entry
BJI67_11495 CDS
T09769
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
aaeo
Acidihalobacter aeolianus
Pathway
aaeo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aaeo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BJI67_11495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aaeo03021
]
BJI67_11495
03400 DNA repair and recombination proteins [BR:
aaeo03400
]
BJI67_11495
Enzymes [BR:
aaeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BJI67_11495
Transcription machinery [BR:
aaeo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BJI67_11495
DNA repair and recombination proteins [BR:
aaeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BJI67_11495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
RPOC_hybrid
Biotin_lipoyl_2
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AOV17605
UniProt:
A0A1D8K9I6
LinkDB
All DBs
Position
complement(2488818..2493056)
Genome browser
AA seq
1412 aa
AA seq
DB search
MRDLLNILKPKGPADDFDAIRIGLASPDLIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPMKDFECLCGKYKRLKHRGVVCEKCGVEVTQAKVRRERMAHIELASPVAHIWFLKSL
PSRIGLLLDMTLRDIERILYFEAFVVIDPGMTALERGQLLSDEAYLEAIEEHGDEFDARM
GAEAVLELLKSIDLNGEAVRLRQEMADTNSETKLKRVSKRLKLIESFLESSNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELNAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGTNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPT
LKLHQCGLPKKMALELFKPFIFGKLIRRGLATTIKAAKKLVEREEPEVWDVLEDVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLET
RSLMMSSNNILSPANGEPIIVPSQDIVLGLYYMTRERVNARGEGMVFADSAEVHRAYETG
VLDLHARVKVRIREHILRDSGEIETVTSVKDTTAGRALLYDIAPEGMTFEMFDRDMTKKA
ISSLINVCYRQLGLKATVIFADRLMYTGFNYAARSGVSFGAGDMVVPEQKVDLLASAEAE
VKDIEDQYATGLVTKGERYNKVIDIWSRANDQIAKAMMEKLGTDDVVGADGKTVKQKSFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDVVVTETDCGTENGIVMTPIIEGGDVVEALRERVL
GRVVARDALRPGTDEVLAAAGTLLDERWCDVLEEAGVDEVLVRSAITCETLHGVCAQCYG
RDLARGHAVNIGESVGVIAAQSIGEPGTQLTMRTFHIGGAASRSVAASNIQVKAKGVVRL
HNIKLVEHHNGNLVAVSRSGELGIVDEMGRERERYKVPYGATISTKEGVEVEAGEIVATW
DPHTHPIVTEVDGRARFQDFVDGVSVVKQTDEVTGLSATIVTDPKSRGNAGKDLRPSIRL
VDAEGSDLMLAGTQIPAVYALPAGSIVNLEDGDEVAVGDVLARIPQESSKTRDITGGLPR
VADLFEARKPKEPAILAERTGTVSFGKDTKGKQRLVITDENGDTYEELIPKWRQVSVFEG
EKVEKGEVIAEGELNAHDILRLRGIPALASYLVREIQDVYRLQGVTINDKHIEVIIRQML
RKVDIVDAGDTRFLKGEQVDRARLVEENRRVLSEDKQMALYESVLLGITKASLVTESYIS
AASFQETTRVLTEAAVRGASDALRGLKENVIVGRLIPAGTGLAFHDERRRKRHMGEMLAM
ELAAAVAEGRESAAEEVTDMPSGDEAAPPAAE
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgagagacctactgaatattctgaagcccaagggccctgctgatgacttcgacgcgatc
cgcatcgggctggcgtccccggacctgatccgttcgtggtcctatggcgaggtcaaaaag
ccggaaacaatcaattaccgcaccttcaagcccgagcgcgacggtctattctgcgccaag
atcttcgggccgatgaaggatttcgagtgcctgtgtggcaaatacaagcgcctcaagcat
cgcggcgtggtctgcgagaagtgcggcgtcgaggtgacccaggccaaggtgcgccgcgag
cgcatggcccacatcgagctggccagcccggtggcgcatatctggttcctgaagtcgctg
ccgtcgcgcattggcctgctgctcgacatgaccctgcgtgacatcgagcgcatcctctat
ttcgaggccttcgtggtgatcgatccgggcatgaccgcgctggagcgcggtcagctgctg
tcggacgaggcctatcttgaggccatcgaggagcacggcgacgagttcgacgcgcgcatg
ggcgccgaggcggtactggagctgctcaagagcatcgacctgaacggcgaggcggtgcgc
ctgcgccaggaaatggccgataccaactccgagaccaagctcaagcgggtatccaagcgc
ctcaaactgatcgaatccttcctggagtcgagcaacaagccggaatggatgatcctgacg
gtgctgccggtcctgccgcccgacctgcgtccgctggtcccgctcgacggcggccgcttc
gcgacctcggatctgaacgatctgtaccgccgcgtgatcaaccgcaacaaccgcctcaag
cgcctgctcgagctgaatgcgcccgacatcatcgtgcgtaacgagaaacgcatgctgcag
gaagcggtcgacgcattgctcgacaacggccgtcgcggtcgtgcaatcaccgggaccaac
aagcgtccgctcaagtcgctcgccgacatgatcaagggcaagcaggggcgtttccgccag
aacctgctgggcaagcgcgtcgactattcgggccgttcggtcatcgtggtcggccccacg
ctcaagctgcatcagtgcggcctgcccaaaaagatggcgctggaactgttcaaaccgttc
atcttcggcaagctgatccgccgtggtcttgcgaccaccatcaaggcagccaagaagctg
gtcgagcgcgaagagccggaggtctgggacgtcctcgaggacgtgatccgcgaacatccg
gtgatgctcaaccgtgcaccgaccctgcaccgtctgggcatccaggcgtttgagccggta
ttgatcgagggcaaggccatccagcttcatccgctggtctgctcggccttcaacgcagac
ttcgacggcgaccagatggcggtgcacgtgccgctgtcgctggaggcgcagctcgagacg
cgcagcctcatgatgtcctccaacaatattctgtcgccggccaacggcgaaccgatcatc
gtcccttcacaggacatcgtgctcggcctgtactacatgacccgagagcgcgtgaacgcg
cgcggcgagggcatggtgttcgccgacagcgcggaggtgcaccgcgcctacgaaaccggc
gtgttggacctgcatgcccgggtcaaggtgcgtatccgcgagcatatcctgcgtgacagc
ggcgagatcgagaccgtgacttcggtcaaggacacgactgccgggcgcgcgctgctctac
gatatcgctcccgaaggcatgacgttcgagatgttcgaccgcgacatgaccaagaaggcg
atctccagcctgatcaatgtctgctaccgtcagctgggcctgaaggccacggtgattttc
gccgaccgtctgatgtataccggcttcaactatgcggcgcgttccggtgtgtccttcggt
gccggcgacatggtcgtccccgagcagaaggtcgatctgctggcgtccgccgaagcggag
gtcaaggatatcgaggatcagtacgctacgggccttgtgaccaagggcgagcgctacaac
aaggtcatcgatatctggtcgcgtgccaacgaccagatcgccaaggcgatgatggaaaag
ctgggtaccgatgatgtggtcggcgccgacggcaagacggtcaagcagaagtcgttcaac
tccatttacatgatggccgattccggagcgcgtggttccgccgcccagatccgccagctc
gccggcatgcgcggcctgatggccaagccggacggctcgatcatcgagacgcccatcacc
gcgaacttccgcgagggtctgaacgttctgcaatacttcatctccacccacggcgcgcgc
aagggtttggccgataccgcgctcaagaccgccaattcgggctatctgactcgtcgtctg
gtggacgtcgcgcaggacgtggtggtgaccgaaaccgattgcggcaccgagaacggcatc
gtcatgaccccgatcatcgagggtggcgacgtggtcgaggcactgcgcgaacgcgtgctt
ggccgtgtggtggcgcgtgacgcgctgcgtcccggtacggacgaagtgctggcggcagcg
ggtacgttgctcgacgagcgctggtgcgacgtgctcgaagaggctggcgtcgacgaggtg
ctggtgcgttccgcgatcacctgcgaaacgctccacggcgtttgcgcgcaatgctacggg
cgcgatctggcccgcggtcatgccgtgaacatcggcgaatcggtgggcgtcatcgccgcc
cagtcgatcggcgagccgggcacgcagttgaccatgcgtaccttccatatcggtggtgcg
gccagccgctctgttgctgccagcaacatccaggtcaaggccaagggtgtggtgcgcctg
cacaacatcaaactggtcgaacaccacaacggcaacctggttgcggtatcgcgttccggt
gaactcggcatcgtcgacgaaatgggccgtgagcgcgagcgctacaaggtcccctacggt
gcgaccatttccaccaaggagggcgtcgaggtcgaggctggcgagatcgtcgccacctgg
gatccgcatacccacccgatcgtgaccgaagtggacgggcgtgcgcgcttccaagacttt
gtcgacggcgtctcggtggtcaagcagaccgacgaggttaccggtctgagtgccaccatc
gtcacggatccgaaatcgcgcggcaacgccggcaaggatctgcgcccgtccatccgcctg
gtggatgccgaaggcagcgacctgatgctggcgggtacccagattccagccgtttacgcg
ctgcccgcggggtcgatcgtcaacctcgaggatggtgacgaggttgcggtaggcgacgtc
ttggcgcgtatcccgcaggaatcgtcgaagacccgcgacatcacgggtggtctgccacgc
gtcgccgacttgttcgaggcgcgcaagcccaaggagccggcgattctggccgagcgtacc
ggtacggtcagcttcggcaaggacaccaagggcaagcagcgcctggtcatcaccgatgag
aatggagacacctacgaagagctgattccgaaatggcgtcaggtcagcgtgttcgagggt
gaaaaggtcgaaaagggcgaggtcatcgcggaaggcgagctgaatgcccacgacatcctc
cgtttgcgtggcatccccgcactggcgagctacctggtgcgcgagatccaggacgtctac
cgcctgcagggcgtgaccatcaatgacaagcacatcgaggtgatcattcgccagatgctg
cgcaaggtggatatcgttgacgccggcgatacccggttcctcaagggcgagcaggtcgat
cgcgctcgcctggtcgaggaaaaccgcagggtcttgtccgaagacaagcagatggcgttg
tacgagtccgtattgctcggcatcaccaaggcctcgctggtcaccgagtcgtacatctcg
gcggcttcgttccaggagaccacgcgcgtgctgaccgaagccgctgtacgcggtgccagc
gatgcgctgcgcggtctcaaggaaaacgtcattgtcggccgtctgatcccggcgggtacc
ggcctggcgttccacgacgagcgtcgtcgcaagcgccatatgggtgaaatgctggcgatg
gaacttgccgcagcggtggcagaaggccgtgaatccgcggctgaggaagtaaccgacatg
ccgtcgggcgacgaggcagcgccaccggcagccgaataa
DBGET
integrated database retrieval system
