Aedes aegypti (yellow fever mosquito): 5569047
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Entry
5569047 CDS
T01053
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
aag
Aedes aegypti (yellow fever mosquito)
Pathway
aag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
5569047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aag03019
]
5569047
Messenger RNA biogenesis [BR:
aag03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
5569047
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
5569047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
NOT1_connector
CNOT1_CAF1_bind
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
5569047
NCBI-ProteinID:
XP_021701849
LinkDB
All DBs
Position
2:complement(344895136..344944276)
Genome browser
AA seq
2425 aa
AA seq
DB search
MNQEPCSYALTQISYLVSNLNKKNFASNSRQLAQFVKDFGLEADRHLLRCLFSAVDFSCS
AGRSSGDAAVTPGHSRSNSTSSSTSNSTNNYFSSSGPLLSLQARLLSSELLGLLSKPQLV
GNVCFAVDNPLPQQRTLTPSVNLVTQIVRTLNCSPIQQAALALALLHSSHPDIVRSAEEN
ARSCIAELIQSYIDLDSTQPTQEGSLNDVSPELLQHILSLISHDKHQEFGLSDSTYGKFV
QQLCRDFPRDRVPLILAPLLYPENTELSAESVKANSQSLLRSSIMDTAWGSLVMEIGYGF
TASVEDCKNHLLKVGGREISAPDVAKIISSMCLTHASLSESSINLPTPSSFWPQGSDPGG
KGKDGQNGGSSSENSTWKPEIFVQALKEVVPNLNWKDVCLAFDHPDFLIKDRPGLALLLS
IVKMGMQSSGLGQNFPVECVYQRWTNVEGQLSLITMILKSPDLYSFADHIYTSVSVDLLK
TPPETDNKEVASWLSLHLVDVLLYIADNGFYAQAMEIFKIPIQLCPDILFMALLQINPPV
TVSRQELFTTLIPIFLGNHPNSGTILHHAWNNTSFNPSLRHIILHSMSEWYLRGENDQSR
LSRILDVAQDLKALSNLLNVRSFIFIIDLACLASRREYLKLEKWLADKIREHGEPFVKTI
IKFLQRRFPQIMMGKFADEQIPKSAQLPPETLSTILSCLQACVGNVSQEVAEIIMSMTQY
NLLLTSKTRAQQAPQQQQPPPPGVVRPHRVLEAPFSASALGGQIFPGPSVESLSGLASNM
AGLNLGGPGNSAFSFGSALGNLVSTPASPSRLLAGPSNSPFPLMSMPPSAPVGNIGRLPQ
TPTGDKLTMPTAGQTTFAEIGCQAVSKEVEDEANSYFQRIYNHPPHNTLSIDEVLDMLQR
FKDSPIRRECDVYQCMLRNLFEEYKFFPQYPDKELQITAQLFGGMVERNLVTTYVALGLA
LRCVLDALKKQEGSKMYYFGITALDRFKNKLHLYPKYCEYVHGIPHFDQFPPHLIEYIEY
GAQGQEPPNKTLGPGPLPSSITQLLPGGPSGVGGGNPLYRTNSATGTSNLTSAAPPAAPK
VNLGSQLGTTSQPPRVKSIANATNIDTLLVATQEGDEKIINPPDAVQDKTAFIFNNLSQL
NLQQKCEEIKDILQKDYYVWLAQYLVLKRASIEVNFHVLYSNFLDALKIPEVNKLVTKET
FRNIKVLLRSDKAMANFSDRSLLKNLGHWLGMMTLGRNRPILHLDIDMKSLLVEAYNKGQ
QELLFVVPFVAKVLESCSKSKVFKPPNPWTMAIMNILAELHQEPDLKLNLKFEIEVLCKN
LNIDVADLKPAIYLKDPERAQNIEYQLSQPKPAKELQPIQVIQVAEEIASAGPSGSPAIP
AMDPSLAVTGPPEPRFHYSDINISNFACINQHVVYSPNIALLHTHPHLKQIIKTALERTI
TDWITPVVERSVKIASKTCEQIIRKDFALDPDEIRMRTASHNLARNLAAGMAMITCRDQL
MQNIQNNIKTAFMTTLSPAQKDVAEAAANQLAADNMELVSAFIQKTAIEKVVPEMDKLLA
TDYELRKIARQEGRRYCDASVLTYQAERMPERIRLSVGGVSPSQLAVYEEFARNIPGFQP
ITDRDNALFAPKLPEALPTVAQFPTPAAVTPDEIGVLYDELASKMEVFLSSAVNVPQLHV
HLNNMHTLLECLIIARRSRDNLTACNLLNKAVEGIMEGLMNIPDHIDQIKLYRDIHLRVM
RLLQDPRAFGPLWTNKAITRYMLECREEIRYNVEAVDLLISSGFVNMPQYDMMLMQLMDN
GNNYVAVVFAMQLVQTYFIDERPNTIITDNDLLNTIELLARLSAHPRAPEGLAHLMEMLR
SNHDPNTFLVDRAHAGPTAHIHSGIIIARATDIEDPPGFAERVEYLLKDWITIFHTPSNS
KDMIKAFGGFVNKMNVYGILKGDEPLTRFFRHATQCCIDLTYRNMNDPSWKTKIFQWIDA
YVRLIALLVKHSGEGGSTSTKLNLLNKVLGIVVGILMHDQEVHGTAFQQMGYHRIFIMLF
LELSAHDPVLENISLSVITAFCHTYHILRPSLAPGFCYSWLELISHRVFIGRILASIPQQ
KGWSMYSQLLIHLFKYLAPFLRNAELAKPVQHLYKGTLRVLLVLLHDFPEFLCDYHFGFC
DVIPPNCIQMRNLILSAYPRNMRLPDPFTPNLKVDMLTDIGGSPRIFTNYAAAITPSSFK
KDLDSYLKARSPVTFLSELRSNLQISNEPGSRYNIPLMNALVLYVGTQAIAHIRSKNLGP
TMATIVHSAHMDIFQNLAVDLDNEGRYLFLNAIANQLRYPNSHTHYFSCAILYLFVEANS
EAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAYKFWDHDFVHCAPEIEKLFESVA
NSCMVVKSKSQPQMPNVESEIAECN
NT seq
7278 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagagccctgctcatacgccctaacccagatcagttacctggtttcgaacttg
aacaagaagaactttgcctcgaatagtcggcaattagcacagtttgtgaaagattttgga
ttggaagctgatcgtcatttgctgcgctgcctgttctctgcggttgatttctcctgctcg
gctggaagatcgtccggagacgccgctgtgaccccgggccattccaggagcaacagcacc
agtagcagtaccagcaacagcaccaacaattacttctccagtagcggaccattactgtca
ctgcaggcccgattgctgtcctcggaattgctgggactgctgtccaagccgcagctggtc
gggaacgtttgctttgccgtggacaatccgctaccgcaacaaaggacattaaccccctcg
gtcaatctcgtgacccagattgtaaggaccctcaactgttcgccgattcagcaagccgct
cttgcccttgcgcttcttcattcgtcgcatccggacattgttcgaagcgctgaggaaaac
gctcgcagttgtattgctgaactcattcaatcttatatcgacttagactcaactcaacca
acccaggagggaagtctcaacgacgtctctccggaactgctacagcacatcctatcgttg
atttcgcacgacaagcaccaggagtttggcctatcggactcgacctacggcaagtttgta
cagcagctgtgtcgggactttcctcgggatcgggttccgttgatactcgccccgctgctg
tacccggagaatacggaactgtcggccgaatcggtcaaagccaactcgcagtcgttgctc
cgttcgtcaatcatggacacggcctggggtagtctggtgatggagatcggatacggattc
acggcctcggtggaggattgcaagaatcatctgctgaaggtcggtggccgggagatttcc
gcgccggatgtggcgaaaatcatctcgtcgatgtgtctgactcatgcgtcgctctcggaa
agcagcatcaatttgcctacgcccagtagtttctggccgcaaggaagtgatcccggtggg
aaggggaaggacggtcagaatggcgggtccagttcggagaatagtacctggaagccggag
attttcgttcaagctttgaaggaggtggttcctaacttgaactggaaggatgtctgcctg
gcgtttgaccatcccgatttcctgatcaaggatcgacctggtttggcattgctgttgtcc
atcgtcaagatgggaatgcagtccagtggtttgggacagaatttccccgtggagtgcgtg
tatcaacgatggacaaatgtggaaggtcaattgtcgttgattacgatgattttgaagagc
ccggatttgtactcgtttgcggaccatatctacacgagtgtttctgttgatctgttgaag
acgccaccggagacggataacaaagaagtggcatcgtggctgtcgctccatctggtggac
gttttgctgtacatagccgacaacggattctatgcccaggcgatggagattttcaagatc
cccatacaactttgcccggatattctgtttatggcattgctgcaaatcaatcctcccgta
accgtatctcgtcaggagctgttcacaacgctgattccgatcttcctcggcaatcatccg
aactcgggaacgattttgcatcatgcttggaacaacaccagcttcaatccttcgctgaga
cacatcatactgcactcgatgagcgaatggtatctgcgcggagaaaacgatcaatctcgc
ttgtcccgaattctggatgtggcgcaagatcttaaagccttgtccaatctgctgaatgtg
cgatcgtttatattcatcatcgatttggcttgtctggcatctcgtcgtgaatatctcaag
ctggagaagtggctggcagacaagattcgtgaacatggagaaccgttcgtcaagacaatc
attaagtttctgcagcgtcgtttccctcagatcatgatgggaaagttcgccgatgagcag
atcccgaagtcggctcaactaccgccagaaaccctgagcactattttgtcctgcttgcaa
gcgtgcgttggaaacgttagtcaggaagtcgccgaaataatcatgagcatgactcaatac
aaccttctgttgactagcaagactcgagcacagcaagctccccagcagcaacaacctcca
ccacctggagttgtaagaccccatcgtgttttggaagctccgttcagtgcatctgcactg
ggaggtcagatattcccaggaccgtcggttgaatcgctgtccggattggcaagcaatatg
gctgggttgaatttaggaggtcccggtaacagtgctttcagttttggaagtgctcttggt
aatctggtgtcgactcctgcttcgccgtccaggcttttggctggaccgtcgaatagcccc
ttcccgttgatgtcgatgccaccttctgcacccgtcggaaacatcggacgtttgccacag
acccctacgggagacaagcttacaatgccaacggctggtcagacaactttcgccgaaatt
ggatgccaagctgtctcgaaggaagtcgaagatgaagccaatagctacttccagcgaatc
tacaatcatccgccgcataatacgttgtccatcgacgaggttctggatatgttacagcgt
ttcaaggattctcccatccgtcgggaatgcgacgtctatcagtgcatgttgcgtaacctc
ttcgaggagtataaattcttcccacagtacccggacaaagaactgcaaatcactgctcaa
ctgttcggaggaatggtcgaacgtaacctcgtgacaacgtatgttgccctaggcttagca
ttgcgatgtgtgctggatgccctcaagaaacaggaaggctccaaaatgtattacttcggt
atcactgccttggatcgcttcaagaacaagctgcatctttacccgaaatactgcgaatac
gttcatggaatccctcacttcgatcaattcccaccccatctgatcgagtatatcgaatac
ggtgctcaagggcaagaacccccgaacaaaacccttggacctggaccactgccatcgtcc
atcacccaacttcttccgggaggaccatccggagttggtggcggcaatccgctgtatcgt
accaattctgccacgggaacaagcaatctcacgtctgccgcgcctccagcggctcccaag
gtcaacctgggatcccaactcggaaccacaagccaaccgccacgggtcaagtccattgcc
aatgcgaccaacatcgacaccctattggtggccacccaagaaggcgatgaaaagatcatc
aaccctccggacgccgtccaggacaaaacggccttcattttcaacaacctcagtcagttg
aacctccagcagaaatgcgaagagatcaaggacatcctgcagaaagattactacgtctgg
ttggctcagtatctggtcctgaagcgagcttcgatcgaagttaacttccatgtcctgtat
tcgaactttttggacgctctgaagatcccggaggtcaacaaactggttacgaaggagacc
ttccgtaacatcaaagtgctgctcagatcagacaaagcaatggccaacttttccgacaga
agtctgctgaagaatctgggacattggctcggtatgatgaccttgggccgaaacaggccc
atcctacatctggacatcgacatgaaatcactgcttgttgaagcatacaacaagggccag
caggaattgcttttcgtagttcccttcgtcgcgaaggtcctcgaatcatgctccaagagt
aaggttttcaaaccgcccaacccgtggaccatggcaatcatgaacattctggccgagttg
caccaggaaccggatttgaagctcaacctcaagttcgaaatcgaagtgctgtgcaagaac
ctcaacatagacgttgccgatttgaaacctgccatctatctaaaagacccggaacgtgcc
cagaacatcgagtatcaactatcccagccgaagcctgccaaggaactccaaccgatccag
gtcattcaggtggccgaggaaattgcctccgctggcccatcgggatccccagccatccca
gctatggatccttccctagccgtgaccggtcctccggagccacgtttccactactcggac
atcaacatctcgaactttgcctgcatcaatcagcacgtggtgtactctcccaacattgcc
ctgctgcacacccatccgcatctcaagcagatcatcaaaaccgccctggaacgaaccatc
accgactggattacgccggtggttgaacgcagtgtcaagatcgcctcgaaaacctgcgaa
cagatcattcggaaggacttcgctctagatccggatgagattcgcatgcgcacagcatct
cacaatcttgctcgcaatctggctgcaggtatggccatgattacctgccgggaccaattg
atgcagaacatccagaacaacatcaagacggcgttcatgaccacgctgagtccggcgcag
aaggacgtagccgaggctgctgccaatcaactggctgccgacaacatggagttggtttcg
gcgttcattcagaagactgccattgagaaggtggtgccggagatggacaagctgctggcc
acggattacgagttgcgaaagattgcccgccaggaaggccgccgctattgcgatgccagc
gtgttgacgtaccaagccgagcgaatgccggagagaatccggttgagcgtcggaggagtg
tcgcccagtcagctggcggtgtatgaggagtttgcccggaatattcccggcttccaaccg
atcaccgaccgggataatgcgctgtttgctccgaaattgccggaagcactgccaaccgtt
gctcaattccccactccggcggccgtcactccggatgagatcggagtgctgtacgatgag
cttgccagcaaaatggaagtgtttctcagcagtgccgtcaatgtgcctcagttgcatgtc
catctcaacaacatgcacacgttgctggaatgcctaatcattgcccgtcgttcgcgggac
aatctcactgcatgcaatttgctgaacaaggccgtcgaaggtatcatggagggtctgatg
aacatcccggaccacattgaccagatcaagctgtatcgggacatccatctgcgtgtgatg
cgtctgctgcaagatccgcgtgcattcggaccgctttggaccaacaaggccatcacccgg
tacatgctggagtgccgtgaagaaatccgttacaacgtcgaagcggttgacttgctgatt
tcgtccggatttgtcaacatgccccagtacgatatgatgctgatgcagctgatggacaat
ggcaacaattacgtagccgttgtgttcgccatgcagctggtgcagacctacttcatcgat
gagcgcccgaatacgataatcaccgataatgatttgctgaatacgattgaactgctggcc
agattgtcggcgcatccgagggccccggaaggtttggctcacttgatggaaatgctccgc
tcgaatcatgatcccaacacgttcctggttgatcgtgcccatgctggaccaacggcgcac
atccattcgggtatcatcattgctagggccaccgatatcgaggatcctccgggctttgcc
gagcgggtagagtatctactgaaagattggatcacgattttccacaccccgtccaattcg
aaggacatgatcaaggcattcggaggcttcgtcaacaagatgaacgtgtacggaattctg
aagggtgatgagccgctgactagattcttccgtcatgcaacgcagtgctgtatcgatctg
acctatcgcaacatgaacgatcccagctggaagacgaagatcttccagtggatcgatgct
tacgtgcggttgattgccctgttagtgaaacactctggcgagggtggcagtaccagcact
aagctgaatttgttgaacaaggttctgggcatcgtagttggcatcctgatgcatgatcag
gaagtgcatggcactgctttccagcagatgggctatcaccgtatcttcattatgctgttc
ctggagctgagcgctcacgatcccgtgctggagaatatcagcctcagcgtaatcactgcc
ttctgccacacgtatcacattctccgaccctcactggcaccgggcttctgctattcctgg
ttggaactgatttcccaccgggtcttcatcggacgcatcttggcctcgattccacagcag
aagggatggtccatgtattcgcaacttctgattcatctgttcaagtaccttgccccgttc
ctgcgcaatgccgaactggccaaaccggtgcaacatttgtacaagggaacgctacgggtg
ctgttggttctgctgcatgacttcccggagttcttgtgcgattaccacttcggtttctgc
gatgtgattccaccgaactgcattcaaatgagaaatttgatcctatcggcatatccacgc
aatatgcggctaccggatccattcacgccgaatctgaaggtcgacatgttgaccgacatc
ggcggttcgccccgtatcttcaccaactacgccgcagcaatcactccgagcagcttcaag
aaagatctggactcctacctgaaggcccgatcgcccgtgacgttcctctcggagctgcgt
agcaatctgcaaatctcgaatgaaccaggatcccggtacaacatcccgttgatgaacgcc
ctggtgttgtacgtcggcactcaggcaatcgctcacatcaggtcgaaaaatctgggaccc
acgatggcaaccatcgtccacagtgcccacatggatatcttccaaaatctggcggtagat
ttggacaacgaggggcgatatctgttcctgaatgcgattgccaaccagctgcggtatccg
aacagccacacgcactacttcagctgcgcgattctgtatcttttcgtcgaggccaactcg
gaagcgatccaggaacaaatcactcgcgtcctgctggaacgactcatcgtgaaccgtccg
catccgtggggattgctgattacgttcatcgaactgatcaagaacccagcgtacaagttc
tgggatcatgactttgtgcactgtgcaccggaaatagagaaactgttcgaatcggtagcc
aactcgtgcatggtggtcaaatccaagagtcaaccgcagatgccgaatgtcgagtcggaa
attgccgagtgcaactag
DBGET
integrated database retrieval system
