Anatilimnocola aggregata: ETAA8_26340
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Entry
ETAA8_26340 CDS
T07027
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aagg
Anatilimnocola aggregata
Pathway
aagg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aagg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ETAA8_26340 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aagg03019
]
ETAA8_26340 (recQ_2)
03400 DNA repair and recombination proteins [BR:
aagg03400
]
ETAA8_26340 (recQ_2)
Enzymes [BR:
aagg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ETAA8_26340 (recQ_2)
Messenger RNA biogenesis [BR:
aagg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ETAA8_26340 (recQ_2)
DNA repair and recombination proteins [BR:
aagg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ETAA8_26340 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
ResIII
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
QDU27546
UniProt:
A0A517YBB2
LinkDB
All DBs
Position
complement(3331121..3333766)
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AA seq
881 aa
AA seq
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MEVADSNLETTDQLAIHLAPFGLRAFRPGQRDVISAVLARQDCLCIMPTGGGKSLCYQLP
AIARTGLTLVVSPLIALMKDQVDALQSLGISATFINSSLTLPEQRDRMDRMAAGEYRLVY
IAPERLRNSLFVEKLRSTKIDLLAVDEAHCISEWGHDFRPDYARLGLLRQRIGSPPTIAL
TATATPIVRGDVVQQLNLQDPQVFITGFARTNLHFEVTTAHSQADKFQELMEFLAATPGS
GIIYAATRKRCGELVEMLGDAGLKRKVAFYHAGLQPEERRSVQEAFMADRVNIIVATNAF
GMGIDKRDLRFVVHYNIPGSLEAYYQEAGRAGRDGERSRCLLLYSYADRKIQEFFIDSSY
PPPEIVEEVYDYLREQNSDPIEQTLQEIKETLNLPISSEGVSACEKLLEQCGALERLDSR
QNQGAVRIDSDLPSLVDLLSRDAKNPRKVLQVIERFMGDVRGERVFMRAESVAKAAELDV
SAVNRALKELNKLQAFSYVPPFRGRAIHMLERDKPFRELGIDFAELDRRKRAEYEKLDRM
IDYAETRHCRQRAVLDYFGDPSPGNCGLCDNCHGVKSVGLLANSTEKPMALHPHVVEAVR
IVLSGAARMNGRGRFGKGMLVRMLCGSTSKEIKQFGLAKLSTFGLLEGLKQPEVTAIVDG
LLKIRLLKQTELERNRPTIELSDEGDAVMRGQVPLQHTLPVERELLQRIAAAGPFVTGSA
PAPVPPAAQKAPPATPPKMPPTSKPREPVPSYSPESADDGYEPCFEEIFRTDEPETMVKP
PAIQQPAPRPTPVPTASTPGVLRKPDLFDSVPAQRESTAPVKQTNGQKAAQPEHYWTWRV
LAAGFTLAEAAQIRGLTIAQLRQHAKLAAQDGYQVELDWLE
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgcggactcgaatcttgaaacgacggaccagttggcgattcacctggccccc
ttcggcctgcgcgcgtttcgccccggacaaagagacgtcattagtgccgtcctggcccgc
caggattgcctctgcatcatgccgacgggcggcggcaagagcttgtgctatcaactgccg
gccattgcccgcacgggactcacactcgtcgtttctccgctgatcgccctgatgaaagac
caggttgatgccctgcaatcgctgggcatctcggccacgttcatcaacagttcgctgacg
ttgcctgaacagcgcgatcgcatggaccggatggctgcgggcgaatatcggctggtttac
atcgcccccgaacgactgcggaattcgctcttcgtcgaaaagctgcggtcgacgaaaatc
gacctcctcgccgtcgacgaagctcactgcatcagcgagtggggacatgactttcgtccc
gattacgcgcgactcggtttgctccgccaacgcatcggcagtccaccgaccattgccctc
accgccacggctacacccatcgtccgcggcgatgtggtccagcagctcaacctgcaagat
ccgcaagtctttatcaccggcttcgcgcggaccaacctgcacttcgaagtgacgaccgcc
catagccaggccgacaagtttcaagagctgatggagttcctcgcagcgactcccggcagc
ggcatcatctacgcggccacgcgcaaacgctgtggcgagttggtcgaaatgctgggcgat
gccggactcaagcggaaggtcgccttctatcatgctggcctgcaacccgaggaacgacgg
agcgtgcaagaagcgttcatggccgatcgcgtgaacatcatcgtcgccaccaacgcgttc
ggcatgggcatcgacaagcgcgatctgcggttcgtcgttcactacaacatcccaggcagc
ttggaggcctactatcaagaagcgggccgcgccggccgcgatggcgaacggtcgcgatgt
ttgctgctgtacagctatgccgatcgcaaaatccaagagttcttcatcgacagttcttat
ccccctccggaaattgtcgaggaggtttacgactacctgcgcgaacaaaactccgacccc
atcgaacaaacgctacaggaaatcaaggaaacgctgaacttgcccatctcgagcgaaggt
gtcagcgcctgcgaaaaactgctcgaacaatgcggcgcgctggagcggctcgactcgcgg
caaaatcaaggagcggtgcggatcgatagcgatttgccctcgctcgtcgacttgctttca
cgcgacgcaaagaacccacgcaaagtgctgcaagtcatcgaacgattcatgggcgatgtc
cgcggcgagcgggtcttcatgcgggccgaatcggtggccaaagcggccgagctcgatgtc
agcgctgtcaaccgcgcgctgaaggaactcaacaagttgcaggccttcagctatgtgcca
ccattccgtggccgcgcgattcacatgctggagcgagacaagccgttccgtgaattaggc
atcgacttcgcagagcttgatcggcgcaaacgggccgagtatgaaaagctcgaccggatg
atcgactatgccgaaacgcgccactgtcggcaacgcgcggtgctcgattacttcggtgat
cctagccccggcaactgcggactgtgcgacaactgccacggcgtgaagagcgtggggctg
ctggctaactccaccgaaaagccaatggcccttcatccgcacgtggtggaagccgttcgc
attgttctcagcggcgcggcccgcatgaatggtcgcgggcgatttggcaaagggatgctt
gtccgcatgctctgtggctccacgtccaaagaaatcaagcagttcggcctcgccaagctc
agcacgttcggtctgctcgaagggctcaagcaaccggaagtgacagccattgtcgacggg
ctcctcaaaattcgactcctcaagcaaacagagctcgaacgaaatcggccgaccatcgaa
ctgagtgacgaaggggatgccgtgatgcgcgggcaagttccgctgcagcacaccttgccg
gtcgagcgtgagctgctacagcgaatcgccgcagcagggccgtttgttaccggttccgcg
ccggccccagttccgcctgccgctcaaaaagcgccgccagcgacaccgccgaaaatgcct
ccgacaagtaaaccgcgcgagccagtccctagctattcgcccgagtccgcagacgatggt
tacgaaccatgtttcgaggagatttttcgcaccgacgaacccgagacgatggtcaaacca
cccgcgattcagcaacccgcgccgaggcccaccccagtgccgacggcaagcacgcccggg
gtgctgcggaagcctgatttgttcgactcggtgccggcccaacgggagtcgaccgcgcca
gtcaagcagacgaacggacagaaggccgctcaacccgagcactactggacctggcgcgtt
ctggccgccggcttcacgctcgctgaagctgcgcagattcggggcctcaccatcgcccaa
ctccgccagcatgccaagctcgcagcccaggacggctatcaagtcgaactcgactggctg
gaataa
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