Aedes albopictus (Asian tiger mosquito): 109410219
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Entry
109410219 CDS
T06060
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
aalb
Aedes albopictus (Asian tiger mosquito)
Pathway
aalb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aalb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109410219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalb03019
]
109410219
Messenger RNA biogenesis [BR:
aalb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109410219
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109410219
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
NOT1_connector
CNOT1_CAF1_bind
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
109410219
NCBI-ProteinID:
XP_029729289
LinkDB
All DBs
Position
Unknown
AA seq
2420 aa
AA seq
DB search
MNQEPCSYALTQISYLVSNLNKKNFASNSRQLAQFVKDFGLEADRHLLRCLFSAVDFSCS
PGRSGDATTPGHSRSNSTSSSNSNNNNNYYSSGPLSLQARLLSTELVGLLTKPQLVGNVC
FAVDNPLPQQRTLTPSVNLVTQIVRTLNCSPIQQAALALALLHSSHPDIVRSAEENARIC
IAELIQSYIDLDSTQPTQEGSLNDVSPELLQHILSLISHDKHREFGLSDSTYGKFVQQLC
RDFPRERVPLILAPLLYRENTELSAEVVKANSQSLLRSSIMDTAWGSLVMEIGYGFTGSV
EDCKNHLLKVGGREISAQDVAKIISSMCLTHASLSESSINLPTPSSFWPQGSDPGGKGKD
GQNGGSSSENSSWKPEIFVQALKEVVPNLNWKDVCLAFDHADFLIKDRPGLALLLSIVKM
GMQSSGLGQNFPVECVYQRWTNVEGQLSLITMILKSPDLYSFADHIYTSVSVDLLKTPPE
TDNKEVASWLSLHLVDVLLYIADNGFYAQALEIFKIPIQLCPDILFMALLQINPPVTVSR
QDLFTTLIPIFLGNHPNSGTILHHAWNNTSFNPSLRHIILHSMSEWYLRGENDQSRLSRI
LDVAQDLKALSNLLNVRTFTFIIDLACLASRREYLKLEKWLADKIREHGEPFVKAIIKFL
QRRFPQIMMGKFADEQIPKSAQLPPETLSTILSCLQACVGNVSPEVAEIIMSMTQYNLLL
TSKTRAQQAPQQQQPPPPGVVRPHRVLEAPFSTSALGGQIFPGPSVETLSGLASNMAGLN
LGGPGNSAFSFGNALGNLVSTPASPSRLLAGPSNSPFPLMTMPPTAPVGNIGRLPQTPTG
DKLAMPTAGQSSFSELGGQAVSKEVEDEANSYFQRIYNHPPHNNLSIDEVLDMLQRFKDS
PIRRECDVYQCMLRNLFEEYKFFPQYPDKELQITAQLFGGMVERNLVTTYVALGLALRCV
LDALKKPEGSKMYYFGITALDRFKNKLHLYPKYCEYVHGIPHFDQFPPHLIEYIEYGAQG
QEPPNKTLGPGPLPSSITQLLPGPSGVGGGNPLYRTNSATGTSNLTSAAPAAAPKVNLGS
QLGTTSQPPRVKSIANATNIDTLLVATQEGDEKIINPPDAIQDKTAFIFNNLSQLNLQQK
CEEIKDILQKDYYVWLAQYLVLKRASIEVNFHVLYSNFLDALKIPEVNKLVTKETFRNIK
VLLRSDKAIANFSDRSLLKNLGHWLGMMTLGRNRPILHLDIDMKSLLVEAYNKGQQELLF
VVPFVAKVLESCSKSKVFKPPNPWTMAIMNILAELHQEPELKLNLKFEIEVLCKNLNIDV
ADLKPAIYLKDPERAQNIEYQLSQPKPAKELQPIQVIQVAEEMASAGPSGSPAIPAMDPS
LAVTGPPEPRFHYSDINISNFACINQHVMYSPNIALLHTHPHLKQIIKTALERTITDWIT
PVVERSVKIASKTCEQIIRKDFALDPDELRMRTASHNLARNLAAGLAMITARDQLMQNIQ
NNIKTAFMTTLSPAQKDVAEAAANQLAADNMELVSAFIQKTAIEKVVPEMDKLLATDYEL
RKLARQEGRRYCDASVLTYQAERMPERIRLSVGGVSPSQLAVYEEFARNIPGFQPITDRD
NALFAPKLPEALPAVAQFPTPAAVTPDEIGVLYDELASKMEVFLSSAVNVPQLHVHLNNM
HTLLECLIIARRSRDNLTACNLLNKAVEGIMEGLMNIPDHIDQIKLYRDIHLRVMRLLQD
PRAFGPVWTNKAITRYMLECREEIRYNVEAVDLLISSGFVNMPQYDMMLTQLMDNGNNYV
AVVFAMQLVQTYFIDERPNTVITDNDLLNTIELLARLSAHPRAPEGLAHLMEMLRSNHDP
NTFLVDRAHAGPTAHIHSGIIIARATDIEDPPGFAERAEYLLKDWITIFHTPSNSKDMIK
AFGSFVNKMNVYGILKGDEPLTRFFRHATQCCIDLTYRNMNDPNWKTKIFQWIDAYVRLI
ALLVKHSGEGGSTSTKLNLLNKVLGIVVGILMHDQEVHGTAFQQMGYHRIFIMLFLELSA
HDPVLENISLSVITAFCHTYHILRPSLAPGFCYSWLELISHRVFIGRILASIPQQKGWSM
YSQLLIHLFKYLAPFLRNAELAKPVQHLYKGTLRVLLVLLHDFPEFLCDYHFGFCDVIPP
NCIQMRNLILSAYPRNMRLPDPFTPNLKVDMLTDIGGSPRIFTNYAAAITPSSFKKDLDS
YLKARSPVTFLSELRSNLQISNEPGSRYNIPLMNALVLYVGTQAIAHIRSKNLGPTMATI
VHSAHMDIFQNLAVDLDNEGRYLFLNAIANQLRYPNSHTHYFSCAILYLFVEANSEAIQE
QITRVLLERLIVNRPHPWGLLITFIELIKNPSYKFWDHDFVHCAPEIEKLFESVANSCMV
VKSKSQPQMPNVESEIAECN
NT seq
7263 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagagccctgctcatacgccctcacccagatcagttacctggtttcaaacttg
aacaagaagaactttgcctcgaacagtcgccaattagcacagtttgtgaaagattttgga
ttagaagctgatcgtcatttgctgcgctgcctgttttctgcggttgatttttcctgctcg
cctggaagatccggagacgctacaaccccgggacattccaggagcaacagcaccagtagc
agcaacagtaacaacaacaacaactactacagtagcggacccttgtcactgcaggcccga
ttgctgtcgacggaactggtcggactgctgaccaagccgcagctggtcgggaacgtttgc
tttgccgtggacaatccgctaccgcaacaaaggactttaaccccatcggtcaatctcgtg
acccaaatcgtcagaaccctcaactgttcaccgattcagcaagccgcacttgcccttgcg
cttcttcattcgtcgcatccggacatcgtccgaagtgccgaggaaaacgctcgcatctgc
attgctgaacttattcaatcttacatcgacttagactcaactcaaccaacccaagaagga
agtctcaacgacgtctctccggaactactgcagcacattctatcgctgatttcccacgat
aagcaccgggagtttggcctatcggactccacctacggaaagtttgtacagcagctgtgc
cgggacttcccacgagaacgggttccgttgatccttgctccgctgctgtaccgggaaaac
acggaactttcggccgaggtagtcaaagctaactcgcagtcgctgctccgctcgtcgatc
atggataccgcttggggcagtttggtgatggagatcggttacggattcaccggctcggtg
gaggattgcaagaatcatctgctgaaggtcggtggccgggagatctccgcgcaggatgtt
gccaagatcatttcatcgatgtgtctgacgcatgcgtcgctctcggagagtagtatcaat
ctgccgactcccagcagtttttggccgcagggaagcgaccccggagggaaggggaaggat
ggccagaatggcggatccagttcggagaacagtagctggaagccggaaatattcgtgcaa
gcgttgaaagaggtcgttcccaacttgaattggaaggatgtctgcctggcgtttgatcac
gcggattttctgatcaaggatcgaccgggattggcgttgcttttgtccatcgtcaagatg
ggtatgcaatccagcggtctggggcagaatttccccgtggaatgcgtctatcagcggtgg
acaaatgtggaaggacaattgtctttgatcacgatgattttgaagagtcccgatctgtac
tcgtttgcggatcatatctacacgagtgtatcggttgacctgctgaagaccccaccggag
acggacaacaaggaagtggcatcgtggttgtcgcttcatttggtggacgtcctgctgtac
atagccgacaacggattctacgctcaggctttggagatcttcaagattccgatccaactg
tgcccggatatcctcttcatggcgttgttgcagataaatccaccggtaacagtgtcccgt
caggatctgttcactacgttgatcccaatcttcctcggcaatcacccgaactctggaact
attcttcatcatgcgtggaacaacaccagcttcaatccctcgctgaggcatatcatcctg
cactcgatgagcgaatggtacctccggggagaaaacgatcagtcgcgcctgtcccgcatc
ctggatgtggcccaggatctgaaagcgctgtccaaccttttgaacgtgcgcacgttcaca
ttcatcatcgatttggcttgtctggcatcccgtcgggagtatctcaagctggagaagtgg
ctcgcggacaagatccgggaacatggcgaaccgttcgtgaaggcgatcatcaagttcctg
caacgtcgcttcccgcagattatgatgggtaaattcgccgacgagcagattccgaagtca
gcgcaacttcccccggagactctgagtacgattttgtcttgtctgcaggcgtgcgtcgga
aatgtaagtcctgaagtagctgaaatcatcatgagcatgacccaatacaatctactgttg
actagcaagacgagagctcagcaagctccacagcagcaacaacctccacctccaggagtt
gtacgccctcatcgtgttttggaagccccgttcagcacttcggctctgggaggacagatc
tttccgggaccgtcggttgaaacgctgtccggattggctagcaatatggccgggttgaat
ttgggaggaccggggaacagtgctttcagtttcggaaatgctcttgggaatcttgtgtcg
accccggcttcaccatccaggctgctggccggtccatcgaatagtccgttcccgttgatg
actatgccaccgaccgcaccggttggaaatatcggtcgcttgccacagacgcccacggga
gacaaactggccatgccaaccgctggacagtcgagtttctctgaactcggaggtcaagcc
gtttcgaaggaagtcgaagacgaagccaacagctacttccaacggatctacaatcatccc
ccgcacaacaacttgtccatcgacgaagtcctggatatgctgcagcgcttcaaggattct
cccattcgtcgggaatgcgacgtctaccagtgtatgctgcgaaacctcttcgaggagtac
aagtttttcccccagtacccggacaaggaactgcagattaccgctcagttgttcggtgga
atggtcgaacgaaacctggtaactacgtatgtcgccctcggtttagccttacgatgcgtg
ctggatgccctcaaaaaaccggaaggttcgaaaatgtactacttcggtatcactgccttg
gatcgcttcaagaacaaactgcatctctatccaaagtattgcgagtacgtccatggaatt
ccccatttcgatcagttcccgccacatttgatagaatacatagaatacggtgctcaaggg
caggagcccccgaataagaccctcggacctggtccgctaccttcgtccatcacgcagctc
cttccgggaccatccggagttggaggcggcaatccgctgtaccgtactaattctgccacc
gggacaagcaaccttacgtccgctgctccagcagctgcacccaaggtcaacctcggatcc
cagctcgggacaacaagtcaacctccgcgggtcaaatccattgccaatgctaccaatatc
gacaccttgctggtggccacccaagaaggcgacgagaagatcatcaacccaccggacgct
atccaggacaaaacggccttcatcttcaataacctcagtcagttgaatctacagcagaag
tgcgaggaaatcaaggacattctgcagaaggactactatgtgtggttggcccagtatctg
gtcctcaagcgagcgtctatcgaagttaattttcacgtcctgtattccaactttttggat
gccctgaagattccggaagttaataaattggtcacaaaggagaccttccgtaacataaaa
gtgctgctccgttcggacaaagccattgccaacttctctgacagaagtctgctgaagaat
ctggggcattggctcggaatgatgaccttgggtaggaatagacccatcctccacctggac
atcgatatgaaatcattgctggtggaagcgtacaacaagggccagcaggaattactcttc
gtggtcccattcgttgccaaggttctggaatcctgttcgaagagtaaggtcttcaaaccg
cctaacccatggactatggccatcatgaacattctggccgaacttcaccaggaaccggaa
ttgaagctcaatctcaagttcgaaatcgaggtcctttgcaagaacttgaacatagacgtc
gcagatctgaaacctgccatctatctgaaggatccggaacgtgcccagaacatcgagtat
caactgtcccagccgaagccggccaaggaacttcaaccgattcaggtcattcaggtagcc
gaggaaatggcctccgccggtccatcgggatccccagccattccggccatggatccttcc
ctggctgtcaccggtcctccagaaccccggttccactactccgacatcaacatctcgaac
tttgcctgcatcaatcagcacgtcatgtactccccgaacattgccctcctgcacactcat
ccccacctgaagcagatcatcaagaccgccctggaacgtacgatcaccgactggatcacc
cccgttgtggaacgcagcgtcaagatcgcgtccaaaacgtgcgaacaaatcatccggaag
gacttcgctctcgatccggacgagctccggatgcgaacggcgtcccacaatctggctcgc
aatctcgcagccggtttggccatgatcaccgcccgcgatcagttgatgcagaacattcag
aacaacatcaaaacggcgttcatgacgacgctgagtccggcgcaaaaggacgtagccgaa
gcagcggccaaccagctggcggccgacaatatggaactggtttccgcattcatccaaaag
acggccatcgagaaggtggtgccggaaatggacaaactgcttgccacggactacgagctg
aggaagcttgcccggcaggaaggccgtcggtattgcgatgccagcgtgttgacttaccag
gcggaacggatgccggagaggatccggttgagcgttggtggcgtgtcgcccagtcagcta
gcggtgtatgaagagtttgcccggaacattccgggattccagccaatcactgaccgggat
aatgcgctgtttgcacctaaattgccggaagcgctgcctgcggttgctcaattccccact
ccggcggccgtcactccggacgagatcggagtgctgtacgatgagttggccagcaaaatg
gaagtattcctcagcagtgccgtcaatgtgcctcagttgcatgttcacctgaataacatg
cacacgctcctggaatgtcttatcatcgctcgtcgatcgcgcgacaatcttactgcatgt
aatctgctcaacaaagccgtcgaaggcatcatggagggattgatgaacatcccggatcat
attgaccagatcaagctgtaccgagacattcacctgcgagtgatgcgtttgctgcaggac
ccacgtgctttcgggcctgtctggacaaacaaggccatcacccggtacatgctggagtgt
cgcgaggagatccgctacaacgtcgaggcggtcgatctgctgatttcgtccggatttgtc
aacatgcctcagtacgacatgatgctgacgcagctgatggacaacggcaacaattacgtg
gccgtggtctttgccatgcagctggtgcagacctacttcatcgacgagcgccccaacacg
gtgattaccgataacgatctgctgaatacgatcgaactgctggccagactatcggcgcat
ccccgggccccggaaggattggcccacctgatggaaatgctccgctcgaatcatgatccc
aatacgttcctggtggatcgggcacatgctggaccaacggcgcatatccactcgggtatt
attatagctagggccaccgacatcgaagatcccccgggctttgccgaacgggcagagtat
ctactgaaagattggattacaattttccataccccatcgaactcgaaggacatgatcaaa
gcgttcggaagctttgtcaacaagatgaacgtgtacggcattctgaagggagacgaaccg
ctgacgagattcttccgtcacgccacccaatgctgtatcgatctgacgtaccgtaatatg
aacgatcccaactggaagacgaagatcttccagtggatcgatgcgtatgtgcggctgatt
gcgctgctggtgaaacattctggcgagggtggcagcactagcaccaagttgaatttgctg
aataaggttctaggcatcgtagttggcattctgatgcacgatcaggaagtgcatggaacc
gctttccagcagatgggctaccaccgtattttcatcatgctgttcctggagcttagcgct
cacgatccagttctggagaatatcagcctcagcgtcatcactgccttctgtcacacgtat
cacattctgcgaccatcgctggcccccggtttttgctattcctggctggaactgatatcg
catcgggtcttcatcggccgcatcttggcttcgattccacagcagaaaggatggtccatg
tattcgcagctgctgatccatctgttcaagtacctggctccgttcctgcgtaacgccgaa
cttgccaagccggtacaacacctgtacaagggaacgctgcgggtgctgctggtactgttg
catgacttcccggagtttttgtgtgactatcacttcggtttctgcgacgtgattcccccg
aactgcatccaaatgaggaatctgatcctgtctgcgtatccacgcaatatgcgtctgccg
gatccatttacaccgaatctgaaggtcgacatgctgaccgacattggcggttcgccccgc
attttcaccaactacgcggcagccatcacgccaagcagcttcaagaaagatctagattcc
tatctgaaggcgcgatcgcccgtaacgttcctctcggaattgcgtagcaatctgcaaatt
tcgaacgaacccggatcccggtacaacatcccgttgatgaacgccctggtgctgtacgtt
ggtacccaggcaatcgctcacatcaggtcgaaaaatctgggtcccacgatggcaaccatc
gtccacagtgcccacatggacatcttccagaatctggcggtagatctggacaacgagggt
cgatatctgttcctgaatgcgattgccaaccagctgcggtacccgaacagccacacgcac
tacttcagctgtgcgatactgtatctgtttgtggaggccaactcggaagcgattcaggag
caaatcacccgcgttctgctggaacgactgattgtgaaccgtccgcatccgtggggactg
ctgattacgttcatcgagctgatcaaaaatccatcgtacaagttctgggaccatgacttt
gtgcactgtgcaccagaaattgagaaactattcgaatcggtggccaactcgtgcatggtg
gtcaaatccaaaagccaaccgcagatgccgaacgtcgagtcggaaattgccgagtgcaac
tag
DBGET
integrated database retrieval system
