Advenella alkanexedens: Q3V95_04125
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Entry
Q3V95_04125 CDS
T09248
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
aaln
Advenella alkanexedens
Pathway
aaln02024
Quorum sensing
aaln03060
Protein export
aaln03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
aaln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Q3V95_04125 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Q3V95_04125 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q3V95_04125 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
aaln02044
]
Q3V95_04125 (ffh)
Enzymes [BR:
aaln01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
Q3V95_04125 (ffh)
Secretion system [BR:
aaln02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Q3V95_04125 (ffh)
Eukaryotic Sec-SRP protein
Q3V95_04125 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
AAA_25
CbiA
MamY_C
AAA_24
AAA_18
TsaE
AAA_30
AAA_33
Motif
Other DBs
NCBI-ProteinID:
WKU20233
LinkDB
All DBs
Position
865464..866891
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AA seq
475 aa
AA seq
DB search
MFDNLTNRLSRVMKTIRGEARLTEANTQEMLREVRLALLEADVSLPVVREFVARVKESAL
GEEVAGSLSPGQALVGVVHKELTALMGGDLGPQASELSLATQPPAVVLMAGLQGAGKTTT
TGKLAKLISGGDLLQNGRKAGRKKVLVVSADVYRPAAIEQLKTVAAQVGVDFFPSDASQK
PRDIALAAVDHAKRHHYDVLLVDTAGRLGIDEAMMAEISMLHEVLKPIETLFVVDAMQGQ
DAVNVAKAFSEALPLTGVVMTKLDGDARGGAALSVRHITGKPLKFIGVSEKLDGLEPFHP
ERMAQRVLGMGDIVSLVEQAQRNIDIAEAQKLATKIKSGDRFDLNDFRDQLQQVKKMGDM
SSLLEKLPAQFAQAAGQLQSGQAEKQLRRTEGILNSMTPQERAKPELLKASRKRRIAAGA
GVPVQEVNKLLKQFEQMQGMMKQFKKGGMGKMMRAMGGLKGLKNMGMGGFGGFKK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgttcgataatttaactaatcgtttgtcccgggtcatgaagaccatccggggagaggcc
cgcctgaccgaagccaatacgcaggaaatgctgcgcgaggtacgtctggcattacttgag
gccgatgtatctttgcccgtggtgcgtgagtttgttgccagggtcaaggaaagtgcgctg
ggtgaggaagtcgccggcagcctaagtccaggacaggccctggtgggggtggttcataaa
gagcttaccgctttaatggggggggatcttgggccgcaggcttccgagctgtctttggca
acccagccgccagccgttgtgttaatggccggtctgcaaggggctggtaaaaccacgacg
accggtaaattggccaaactgattagtgggggcgatttactgcaaaatggtcgcaaggcc
ggccgaaaaaaagtgctggtggtcagtgccgacgtttatcgtccggccgctattgaacag
ttgaaaacggtggccgcacaggttggggtggacttcttcccgtcagatgccagccagaaa
ccgcgtgatattgccctggcagcggtcgatcatgcaaaacggcatcattatgatgtcttg
ctggtggatacggccggtcgattgggtattgatgaggccatgatggccgaaatcagcatg
ttgcatgaagtgctcaaacccattgaaaccctgtttgtggttgacgccatgcaggggcag
gatgccgtgaatgtggccaaggccttctcggaagccttgcccctgaccggtgtggtcatg
accaagctggatggtgatgcccggggcggtgccgccctgtcggtgcggcatattaccggc
aagcccctgaagtttatcggggtttccgaaaaactcgatggtcttgaaccttttcacccc
gagcgtatggctcagcgggtgctgggtatgggggatattgtttccctggttgagcaggcc
cagcgcaatatcgatattgccgaagcccagaagctggccaccaagatcaagtcgggtgac
cgttttgacctgaatgattttcgtgatcagctgcagcaggtcaagaaaatgggggacatg
agttccctgcttgaaaaactgccggcacagttcgcccaggcagcgggccagttgcaaagt
ggccaggccgaaaaacaattgcgccgtaccgagggtattcttaattccatgacgccccag
gaacgggccaaacccgaattgctgaaagcatcgcgcaaacgtcgtattgcggcgggtgct
ggggtgccagtgcaggaagtgaacaaattgcttaagcagtttgagcaaatgcagggcatg
atgaagcagttcaagaaaggaggcatgggcaagatgatgcgtgccatgggcgggctcaag
ggcctgaaaaacatgggtatgggtggttttggcgggtttaagaaataa
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