Alternaria alternata: CC77DRAFT_1097231
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Entry
CC77DRAFT_1097231 CDS
T05291
Name
(RefSeq) hypothetical protein
KO
K14311
nuclear pore complex protein Nup188
Organism
aalt
Alternaria alternata
Pathway
aalt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CC77DRAFT_1097231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalt03019
]
CC77DRAFT_1097231
Messenger RNA biogenesis [BR:
aalt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CC77DRAFT_1097231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_C
Nup188_N-subdom_III
Nup188_SH3-like
Nup188_N
Motif
Other DBs
NCBI-GeneID:
29115473
NCBI-ProteinID:
XP_018383456
JGI:
1097231
UniProt:
A0A177DE52
LinkDB
All DBs
Position
Unknown
AA seq
1879 aa
AA seq
DB search
MAPIQSPEFDLGKCLKGEQQLVTWDIAYRALCDPETASKSEALRAFLTSTDNKDILSHPW
KPFADPSSQEKSKFETNTAPIKITPPQSEHYNVEEIKEDSLWLAKEAQISEYAALQLVVQ
EWQGRPTAQLLSGLTEEEALSVQEAAGMGNLGASTFVPNSSILASPLASKTAHLDAKDQR
RLHILDVYHSTCASIIRISQLLVSWGCASNLRSQTIYGNDYLSIGAGWIEELGQAIAAAQ
DGPTGGKALDECLKAFSKRCDSLDTGYGWNVDDSILEAASEKWVVAQTTEMLHILHLALV
HADLVAKDFLPAATIEDWLKAFSFRGFFREFPAVTARQEPLIPVIQLLTSLMSLTILKVD
KIMDDLESGDCNTWASSSYILNTAVVESITTIFGEAKLLGASPATPPTFAWAILTWKLTS
RASYEEQERDRLLESSNNTGNPEPQTSPLEEAALVVARLETHELFDGKMPYEELANVSSA
VGVLAIVNQLVQTSLPAFGTPIDQISQDRIRLLFLQLIRAAVGSDIVAYSPDLIVTTYTI
LTGDNSFRRWENGDISRHADPIVAYFLEDEYVLRPLLLNEARLRYPYEMTPFLKFCSALT
RGDKTMQNGLPTFIEKLGNHNRLMQQLPDGFRDYALTREEENANWVELTGNLPLFSSGVS
SSFRGQRRLLTSGTSTQSDGLSGIPAGTEGIIVDDNASPYVAVWHHQHSTLSYLVELLST
YPVGSTKVETATQQPASRESVIEIIGLFADLMHSSLHASEGVCSTELLEAIGIGAEGSQD
TVNLVLAIFEEELLHLCQEPSNEACLELLVNCTHFLEALIIVSPHRVWPWLARSRLLEGD
GNGSLATILIGTEMVLGRYDFLIGCIRLYKGLVKDAVERSVSRKVPTRALSRFNAAAPSE
SGTSDKIMSTILFTFGRTLASIYENSLNWKYSHPNHRPEINIAICEVFTTILNLAYSVDD
EPKLSAKLAKSIAPIAEYITQLYLTQAGADLPTNPLMTSLITGVSPSDTTLLTTSSALWM
LQTQTTLAFADILVRVAVLLNKPWTHLEQQLFKATPLLARLYATSDKWKSQVVLLLEALV
RGAVRVAGQDDSTMTDGDLKQYVRKQIEQQEPPSLLGHLGPRTAKNFLSVLSQLDEPLQI
VDIQTNVWNLLSAVVTCKQQWFSLYLLTGSTPRESIRSKKDATHDSRNKALLTRALDALS
SMALPDQEAGGLSWPLYTAMLEFVSSAQNNWSWAMGDLRQRKDLIQKLLAFMKWMAKQPK
QPKMSNNNETLERSFQNRFASLACEVIAMYLHHSRQVGDITVLKDVVPSLTYLEDTALDL
PSYSTSLHGYLKQNLEKQYPGVTLGNIKRTTLYPETFGRAFFYDIDLAQRLLGFNSKWTG
PREGTGFAAEVEKANYNLGLVESQVLLLQGWKLLALELSQVVAKDERIVKVLVGVIHKCM
VANEQSNLPEALFGQLMVLRADLAFALLKKLVEAKVRTNEARQLLAPVWNAIRTSTPDFE
NVFSTDAVHYYRSLLRILYLALHFHLIEDTDTSDDASFRSSFRGTMPTSHNKYAEPISTQ
LLEILSDTVAKGFRSLANQLHAEPTSVSPSDFALLTALLQRIIAIPEMSKWQQQAALLFA
NSNTVRYATSLFSWADRLTISHNGIDDPIYGELSVLFLLSLSSIQALAETMAVEGILSQL
NTANIMNYYRRVNGMGPFDNPSRMYSIWTKGILPLCLNLLLSVGPPIAAEISSFLNQFPE
QLARSALSINSNPSSRTSATQKITLAVASEVHSLSLISSILENVRKQGPKLGIQANDVAL
LDWDKENIKEDVESWLNRKSALRERIVAIDERELEMLSSRKGQGEDALSELEKRVFGELE
DAGKCLGVGNGNGNGNGKK
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
atggcccccatccaatcccccgagttcgacctgggcaagtgcctcaaaggcgagcagcag
cttgtaacctgggatatcgcatatcgcgccctctgcgaccccgaaaccgcgtctaaaagc
gaagccctacgcgccttcctcacctccaccgataacaaagatatcctcagccacccatgg
aagcccttcgccgacccgtcgtcgcaagagaagagcaagttcgagaccaacacagcgccc
atcaagatcacaccgccccagagcgagcactacaatgtagaagaaataaaggaagacagt
ctgtggctggccaaagaggcgcaaatatcagaatatgcagcgctgcaattggttgtccaa
gagtggcagggcaggccgactgcacaactgttgagtggactcaccgaagaggaggccctc
agcgtgcaggaagccgctggaatgggaaacctaggagcctcgactttcgtcccgaactca
tccatcctagcctcaccgctcgcctccaagacggcgcatctcgacgcaaaggaccagcgt
cgcctccacattctcgacgtctaccattctacatgcgcttccatcatccgaataagccag
cttctcgtttcatggggttgcgcatcaaacttgcgtagccagaccatctacggtaacgac
taccttagcattggtgccggttggattgaagagcttgggcaggccattgcagcggcacaa
gatggacctacaggtggaaaggcgctagacgagtgcctgaaagcattctccaagaggtgt
gactccctggacaccggttatggctggaacgtcgacgattctatactggaagctgcctcg
gagaaatgggtcgttgcgcaaaccacagagatgctgcacatcctgcatctcgccctggtg
cacgcagatttggttgccaaggacttccttcctgcggctactatcgaagactggctcaag
gccttcagcttccgcggctttttccgcgagtttcctgcagtcacagctcgccaggaacct
ctcattccagtcatacaactgctgacttcccttatgtctttgactatcttgaaggtagac
aaaatcatggacgatcttgagtccggcgactgcaatacatgggcctcctcatcctacatt
ctcaacactgctgttgtagagagcatcactaccatattcggagaagccaagctgctgggt
gctagcccagctacaccaccgacatttgcctgggcaatccttacctggaagctcacaagt
cgtgcgagttacgaggaacaagagcgtgatcgtctgcttgaatcgtcaaataacaccgga
aacccagaacctcaaacttccccgcttgaggaggctgctttggtcgttgccagactcgaa
acccatgagctcttcgatggcaaaatgccttacgaggagcttgctaacgtcagctcagca
gtgggtgtcttggctattgtcaaccagttggtccaaaccagtttgcctgcattcggaaca
ccgattgatcagatatcacaagacaggattcgtctgctatttcttcagcttattcgcgct
gctgttggtagtgacattgtcgcgtacagcccggacttgatagtaacgacatacacaatt
ctgactggcgacaactctttccgcagatgggagaacggcgacatatctcgccatgctgac
ccgattgttgcgtatttcctggaagatgaatatgtccttcgaccactgctgctcaatgaa
gctcggctacgctacccctacgagatgacacctttcctgaagttctgtagcgcattgacc
cgtggcgacaagacgatgcagaacggcttgcctacattcatcgaaaagcttggaaaccac
aatcgacttatgcaacaacttccagatgggtttagggactatgcgttgacgcgcgaggag
gagaacgccaactgggtcgaactcacgggcaaccttccgcttttctcgtctggagtatct
tcgagcttccgtggacaacgtcgattgctgacctctggcacttcgacacagtctgatgga
ctatctggaatacctgccgggacagaaggaatcatcgttgatgacaatgcttccccatac
gtggcggtttggcatcatcagcactctacgttgtcatacttagtcgaacttctctccaca
taccctgtagggagcaccaaggttgagactgccacgcagcagcctgcctctcgcgaaagt
gtcatcgagatcatcggactcttcgctgatttgatgcattcttctctacatgcttctgag
ggcgtttgttcgactgagctcctggaggcgattggcatcggtgctgagggcagccaggat
accgtcaatctcgtgctcgccatcttcgaggaggagctcctgcacctctgccaggagcca
agcaacgaggcgtgtttagagctgttggtcaactgcactcacttcttagaggctttgatt
attgtttctccacacagagtatggccctggctcgccaggagtagattgctcgaaggcgac
ggaaatggcagcttagcgactatcctcattggcactgaaatggttctaggacgatatgac
ttccttattggctgtatccgactctacaagggtctcgttaaagatgcagtcgagcgatca
gtctcgcgcaaagtcccaacgagagcactcagccgcttcaatgctgctgctccttcagaa
agcggaacctcggataagatcatgagcacaatactctttacattcggtcgaacccttgct
agcatatacgagaactcgttgaactggaaatattctcatcccaaccatcggcccgagatc
aacatcgccatctgcgaagttttcacgacgatattaaacctcgcgtacagcgtagacgac
gaaccgaaactatccgctaagctcgccaaatccatcgcgcctatcgccgagtacatcacg
cagctataccttacacaggctggcgcagatcttccgacaaacccgctgatgacctccctg
atcactggggtcagtcccagcgacaccacgttgctcacgacttcgagtgcattgtggatg
ctacagacgcagactactctggctttcgctgacatccttgtccgggttgccgtactcttg
aacaaaccctggacacacttggagcaacaactctttaaagctacgccattactggcacga
ctgtacgcaaccagtgacaaatggaagtcgcaggtcgtgctgctgttggaagctcttgtt
cgtggtgccgtccgtgtcgccggacaagatgactcaacgatgacagacggagaccttaag
cagtatgtacggaaacagattgagcagcaagaaccgccctcactactcggtcatctcgga
ccacggactgcgaagaacttcttgagcgtactctcgcagctcgatgagcctttacaaata
gtggatattcagaccaacgtctggaacttgctttcagccgtagtaacatgcaaacagcag
tggttctccttatatctgcttactggtagcacgcctcgcgagtccattcgttccaagaaa
gacgcgactcacgattcaaggaacaaagccctacttacgcgagcgctcgacgcactctca
agcatggctctaccagaccaagaagcgggtggcctttcatggcctttatacaccgctatg
ctcgagtttgtctcgtcagcgcaaaacaattggtcatgggcaatgggtgacctccgacaa
cgcaaagatctgatccagaaactgctcgctttcatgaagtggatggcaaagcagcccaag
caaccgaagatgagcaacaacaacgagaccctcgaacgctcattccaaaacaggttcgca
tcgttagcctgcgaagtcatcgccatgtacctgcaccactcacggcaagtgggcgatatc
accgtgctcaaagatgttgtgccaagcctgacgtacttggaagacactgctttggatcta
ccgtcctacagtacttccctgcatggttatcttaagcaaaacctggagaaacaataccct
ggtgtcacgctaggcaacatcaagcgaaccacactgtacccagagaccttcgggcgggca
ttcttctacgacatcgaccttgcccagcggcttttgggattcaatagcaagtggacaggt
cccagagaaggcactggtttcgcagctgaagttgagaaagccaactacaacctcggcctg
gttgaatctcaggttctactacttcaaggctggaagctgctggctctggagttgagccaa
gtcgtagccaaggacgagcgtatagtcaaggtactcgttggcgtcatccacaagtgcatg
gtcgccaacgaacaatcgaatctcccggaagcattgtttggccagctcatggttctgcga
gcagatctggcctttgcactgttgaagaagctggttgaggcaaaggtacgaacgaatgag
gcacgtcaattactcgctccagtgtggaacgcgattcgtacctccacgcctgacttcgag
aacgtattctcgaccgacgcggtgcactactaccgatccttgctacgaatcctctacctt
gcccttcacttccatcttatcgaagatacagatacttccgatgacgcatccttccgctct
tccttccggggcactatgcctacaagccacaacaaatacgccgagcccatctcaacccag
ctccttgagattctttccgacacggttgcaaagggcttccgcagccttgccaaccaactt
cacgctgaacctacatccgtctcgccatcggactttgcccttctcactgcactcctccaa
cgcatcattgcgataccagagatgtcaaagtggcaacaacaggcagctctcctcttcgcc
aacagcaacaccgtgcgctacgccaccagcctcttctcatgggctgaccgtctaacgata
tcccacaatggcatcgacgaccccatctacggtgaactcagcgtactgtttctgctctcc
ctgtcaagcatccaggctttggcagaaaccatggctgtagaaggcatactcagtcaactc
aacaccgcaaacatcatgaactactaccgtcgcgtcaacggcatgggtcctttcgacaat
ccatcacgcatgtacagtatctggacaaaaggcatcctaccgctctgcctcaaccttttg
ctttcagtcggcccgcccattgcagcggaaatctcatctttcttgaaccagttcccagaa
caactcgcccgctcggctctaagcataaattcaaatccctcgtcccgcacctcggctacc
cagaagattacgcttgccgtcgcttcggaagtgcactctttgtcgctcatatccagtatt
ctggaaaacgtccgcaagcaaggccctaaactgggtattcaggcaaacgacgtcgcactc
ctagactgggataaggagaacatcaaggaagatgtcgagagctggttgaaccgtaagagc
gcgctgcgtgaacgcattgtagcgatcgatgagcgggagttggagatgctgagcagcagg
aagggccagggtgaggatgcgttaagtgagcttgagaagagagtgtttggcgaactggaa
gacgcgggaaaatgcttgggtgtgggtaacggaaatggaaatgggaatgggaagaaatag
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integrated database retrieval system
