Alternaria alternata: CC77DRAFT_971554
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Entry
CC77DRAFT_971554 CDS
T05291
Name
(RefSeq) Not1-domain-containing protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
aalt
Alternaria alternata
Pathway
aalt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CC77DRAFT_971554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalt03019
]
CC77DRAFT_971554
Messenger RNA biogenesis [BR:
aalt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CC77DRAFT_971554
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CC77DRAFT_971554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
ARM_Cnot1
Prion
DUF1835
Motif
Other DBs
NCBI-GeneID:
29121435
NCBI-ProteinID:
XP_018381724
JGI:
971554
UniProt:
A0A177D967
LinkDB
All DBs
Position
Unknown
AA seq
2291 aa
AA seq
DB search
MSQQHPWGAPRPNQSTRLTPISTAIAHEQRITNTPSPSNSRPAQSPATANFPSLPPASSS
RLVRSRKSSAASSTSSPFSPQAGQQLPASQLLSSRGSRTIAPQAASHLASSAAAATNGPG
AQSSSGGGASKLVRASPSLSTSSTTGSPSTATNPSGPSSQNLSRIVIAQIFLLLSQFGPV
KDDKDRAKWDTQTEQIRKLVDSNGMEVFSKYFRRVLQNNAATIFGTGARNADSNGSYQIL
LTEVHKIRKEPEQADKIAESISSSEGDLFRDFDLQAFISHFKLDSVAKTMLALACRKTDL
RTKADAVLSTVGDDLLMAVAQPTQPEDMSHEYLAALVERLLQDPPQGWDEEKKMSLAYAV
QMRYQQTHQQIPGIVESKLILVELTDGSRNPLVKLVKQAGPQGTATVEACKEVLASAETR
DISYQQVAAVLLYLALSTGYNAKNFVAALREHRTGQRIDWQDVVLAFDRDHLRIEKHQFL
AIYNALLPVAQDTEKFDIQALWGGQWQHDLTQLYFVVAFLSSTRQELDVTQIPRLRTSYS
LKTFENASDDAKSFAEEATKHPFVSLDATAALFNMIFQTSETYHTAQLMGIPDLVINPHT
AEFLVAAAAVPKPWGALQEQALKQLFDPYFLKKLPIYNFVLYGLWKQDSQWLTDRFVDAY
NADSMTLSLVLEHAETNNWLEQLIRSNTDISLDLAAQAHARGKFELGTWLEQTFEQAGPL
FRRILTNFLSARAAEEMQRARDDHQPLNLPLAVKTVYPLLWFLAQCGLPEPELLPLQRNC
IQAYPRLINYGEGVDDIIDANGQNGNSLPEEADKKMQEHFKNMYSGDSDVRDIISALKKY
KESRDPADQDLFACMIHGLFDEYNCFGEYPLEALATTAVLFGGIINFNLLSRIALQVALA
MVLEAVQEYRPEDSMYKFGLQALIHFSNRLHEWPNYCDQLLIVPGLQGTEIFAKAEEVVG
QQVGEVNGDGHNGVGLTNGNGIDDALHQEPAIPKFSCLYVDPPLRPELYEDPDEDVQDKV
LFVLNNVSERNLRDKISDLTEAVEERHHQWFANYLVEERAKMQPNFQQLYLDMLDLFNDK
TLWAEVLRETYASVIRMLNTDSTLGSTERGHLKNLGSWLGSLTIARDQPIKFRNISFKDL
LHEGYDTDRLLLVIPFTCKVLVQAAKSSIFRPPNPWIMEMLGVLMELYHFADLKLNQKFE
IEVLCKGLELDHKEIEPTNSIRGRPPTDEEFLGSMVPEGLEAFSDLSIMGLNRGARGPNE
RFSSAAITAALPDFTNQLQYPPSGNSAVPPAALKKIFLTAVNQAIQEIIAPVVERSVTIA
AISTSQLINKDFAMEPDEEKLRNAAHTVVKALSGALALVTCKEPLRMSIQNHIRVTARDL
PDQALPEGHIIMFVNDNLDLVCNTVEQAAEMSSLAEIDMQIEEAVRIRRMFRSSRPNEPF
KDANISPWAFYIPEPYKQMPGGLNREQLAIYEDFGRQSRGAPHTNNTSQDGGRQLPDVLQ
DQFAAVPNLPTPGAAPAEPRQPAQQARLQSLQAPHAPLTQQQPNGYMEAPGLERGQRGVE
DLLLELTRVIKEAPEERISELQPGSSNVHQVFDQLITSVEYAGPNKETWAFRIAGQVTNH
LFSDSLSRLEVEVMAHLLSHLCQLSVQTSRQVLMWLATLHDDDRIFKSTVMVALMEVSLM
DMHRLNTTIAKAIQERRVAAVEMLSSLMEELLLNEHPSAFRADFAMSIDALTTWLAEDPS
FELGKRVLGNLQVPSNEPMLTPPGSGHKDQLEYVFDEWVHLQMESMPKKTVGAFIYQLHQ
QKVMETQESSVAFIRTCIDSSVAAYEQEHSAPFGNGNEDIATVKIDALGRLVVDLVVYQG
EQDGAVKESKARYLDQILVVVVLVLCNHHSTRGDAFNQKVFFRLFSAILFHLNDAVKEEA
LADQKADVFLAVARALLVLQPSHLQRFTFSWLALVAHRIFVPAMLEEGQGDKRWDVYAQL
IETLLIFTGKLIKPTGETVMAEQFYRGVLRVLLVIHHDFPEFLVENHFRFCNSIPMHCTQ
LRNLIVSAYPSTILEMPDPFTAGLKADRLEHDLQAPVIRADIAQVLSDAGIKDAIDNLLK
GSELKNKDVDKVCQAVYYAEAQSAAFELVSTTANPTLIHAITLYIGIATLGTGPASVPIF
DAESPATKVIERLVKDFHPEARFHFISAIANQLRFPNTHTHFYSYMLLHLFGPPNDDSLA
LEIQETITRVLLERLLVHRPHPWGLIITLLEILKNPTYTFWDLPFVKAAPEVERLLNALF
THAQASPRPLA
NT seq
6876 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcaacacccctggggcgccccgagaccaaaccaaagcacacgcctcacgccc
atatccacggcaattgcccacgagcagcgcatcaccaacacgccctcacccagcaactcg
cggcccgcccagtcgcccgccacagcaaacttcccctcgctgccgcccgcgtcttcatcg
cgcctcgtccgcagccgcaagtcgtcggccgcctcgtcgacgtcgtcgcccttctcgccc
caagcaggacagcagctccccgccagccagctgctgtcctcgagagggtccaggaccata
gcgccccaagctgcctcgcacttggcttcctccgccgcagccgctaccaacggcccaggt
gcacagtcaagtagcggcggaggagcctccaagcttgtccgcgcctcgccttcactctcc
acctcgagcaccacgggctcccccagcacagccaccaacccctctggcccctcgtcccag
aacctttctcgcattgtcatcgcccagatatttctgctgctcagtcagtttggccctgta
aaggacgacaaagaccgcgccaagtgggacacgcaaaccgagcagatcaggaagctggtc
gactcaaacggcatggaggtcttttcaaaatacttccgccgcgtgctgcagaacaatgca
gccaccatcttcggcaccggcgcccgcaacgccgacagcaacggcagctaccagatcctc
ctcaccgaggtgcacaaaatacggaaggagcccgagcaggcagacaagattgcagagtca
ataagctccagcgagggcgacttgttccgcgacttcgacctgcaggccttcatatcccac
ttcaagctcgactcggtcgcgaagacgatgctagccctcgcctgcaggaagacagatctc
cggactaaagccgatgctgtactgtccactgtaggcgatgacctgctaatggccgtcgcg
caacccacccagccagaggacatgagccacgaatacctcgccgccctcgtcgaacgctta
ctgcaagatccaccacaaggctgggatgaagagaaaaagatgagcctagcgtacgccgtt
cagatgcgataccagcagacacaccaacagatccccggcatcgtcgaatcgaaactgata
ctcgtcgagctcacagatggctcacggaatcctctggtcaagctggtcaaacaggcgggt
ccacaaggcacagctacggtggaggcatgcaaagaggtgctcgcttctgccgagacgcgc
gacatcagctaccagcaagttgccgcggtgctcctctatctcgcgctctctactggatac
aacgcgaagaactttgttgccgcactacgcgaacaccggaccgggcagcggatagactgg
caggatgtcgtgttggcttttgaccgggaccacctacgcatcgagaagcaccagttccta
gctatatacaacgcgttgctccctgttgcccaagacacggagaagttcgacatacaagca
ctatggggagggcaatggcagcacgacttgacacagttatacttcgtagtcgctttcctg
tcctctacacgacaagagctggacgtgacacagatccctaggttacgcacctcttactcg
ttgaagacgttcgagaacgcgtccgatgacgccaaatccttcgccgaggaagcaaccaaa
cacccctttgtctcgctcgacgcgacagccgcgctgttcaacatgatcttccagacatcc
gagacctatcacacggcccagctgatgggcatacccgatttggtgatcaatccacacacg
gcggagttcctcgtagcggcagcggcagtcccaaagccttggggtgccttgcaggaacag
gcattgaaacaattatttgatccgtacttcctcaagaagctacccatctacaacttcgtc
ctctacggcctttggaaacaggattcccaatggcttacagatcgatttgtcgatgcctac
aacgccgactcaatgaccctcagtctggtactcgagcacgcggagacgaacaactggtta
gagcaactgattcgcagtaatactgacatcagcttggatttggctgcacaagcgcacgcg
cgcggcaagttcgagcttggtacctggcttgagcagacattcgagcaggccgggccgcta
ttccgtcgcatcctgactaactttctgagtgcgcgggctgcagaagaaatgcaacgagca
cgagacgaccatcaacctcttaacctaccgcttgctgtcaagacagtatacccactgctc
tggttccttgcacagtgcggtctccctgagccggaactgctgcccttacagcggaactgc
atacaggcatacccgaggttgatcaactacggcgaaggcgtggatgacattatcgacgcc
aacggccagaacggaaactcgcttccagaagaggcagataagaagatgcaagagcatttc
aagaacatgtacagcggtgacagtgatgtaagagacatcatctcagcactcaagaagtac
aaggagtcgcgtgatcccgcggaccaagatttgttcgcatgcatgatccacggccttttc
gatgagtacaactgcttcggggaatatcctctagaagccttagccacgactgctgtgctt
ttcggaggtatcatcaacttcaacctcttgtcccgaattgcacttcaggttgcgctggct
atggttctagaagctgttcaggaatatcgacccgaggacagtatgtacaagttcggcctc
caagctctcatacacttctcgaaccgactgcacgagtggcccaactactgcgatcagctc
ctcattgtccctgggctccaaggaactgagatttttgctaaggctgaagaagttgtaggt
cagcaagtcggcgaagttaacggcgatggtcacaacggtgtgggactgacaaacggtaac
ggtatcgatgatgctctccaccaggagccggccatacccaagttcagctgcctctacgtc
gatcccccactccgcccagagctgtacgaggaccccgacgaagacgttcaagacaaagtt
ctgttcgtattgaacaacgtctccgagcgcaacttgcgcgacaagatcagcgatctcacc
gaagccgtcgaagagaggcatcaccagtggttcgcaaactatcttgtcgaggagcgcgcc
aaaatgcagcctaatttccagcaactctacctcgacatgctcgacctgttcaacgataag
acactttgggctgaggtgctccgtgagacgtacgcgagcgtcatccgtatgctgaatact
gactccacgctgggttctacggagcgtggccatcttaagaatctgggttcttggcttggt
tcattgactattgcccgagaccagccgatcaaattccgcaacatctcattcaaggacttg
ttgcatgagggttacgatactgatcgccttcttcttgtcattcctttcacctgcaaggtg
cttgtacaagctgccaagtcttccatcttcaggcctcccaatccttggatcatggagatg
ctgggagtccttatggaactttaccactttgcagacctaaagttgaaccagaaattcgag
atcgaagttctctgcaaaggcctagagcttgaccacaaggaaattgagcccacaaacagt
atccgaggacgacccccaacggatgaagagttccttggatccatggttcctgaaggatta
gaagcattcagtgatctctcgattatgggcctgaaccgtggcgcccgaggtccgaacgaa
cgattctcgtcagcagcaatcacggcagctctgcccgatttcaccaaccagctccagtac
ccgccctctggaaacagcgcggtccctccagcggcattgaagaagatcttccttactgct
gtcaaccaagccatccaggagatcatcgctccggtagtagagcgctctgtcactattgcc
gccatctcaacatcgcagttgatcaacaaggactttgctatggaacccgacgaggagaag
cttcgcaatgcagcacacactgttgtcaaggctctttctggtgccttggcccttgttact
tgcaaggagccattacgcatgagtattcaaaaccacatccgtgtaacagctagagacctt
cccgaccaagcgttgccagagggccatatcatcatgttcgtgaacgacaatcttgacctc
gtctgcaatacggttgagcaggccgctgaaatgtcgtctcttgcggagattgacatgcag
atcgaggaagcagtccgcattcgccgaatgttccgcagctctcgtccgaatgagccattc
aaggatgcaaacatcagcccatgggcattctatatccctgaaccatacaagcagatgcct
ggtggtctgaatcgcgagcagctggccatctacgaagatttcggtaggcagtcacgaggt
gctccgcacacgaataacacgtcccaagacggtggacgtcagcttccagacgtcctccaa
gaccagttcgcagcggtaccgaacctcccaactccaggtgctgcaccagcagagccacgc
caaccagcacagcaagcccggctacagagtcttcaagcccctcatgcacctttgacacaa
caacaaccaaacggctacatggaagctccaggcttggagcgtggccagcgtggtgttgag
gatcttttgctcgaactgactcgcgttatcaaggaggcgccagaggaacgtatcagcgaa
cttcagcctggtagcagcaatgttcaccaggttttcgaccagctcatcacaagtgttgag
tacgcgggtcctaacaaggagacctgggctttccgcatcgcaggtcaagtcactaaccat
ctcttttccgactcattgagccgcttggaggtcgaggtgatggcgcatctactaagtcat
ctctgccaattgtctgtccagacttcgcggcaggtacttatgtggttggcgactctacac
gacgacgacaggattttcaagtccacagtcatggtcgctttgatggaagttagcctgatg
gatatgcaccgcctgaacacgactatcgctaaggccattcaagaacgacgtgtcgccgca
gtggagatgctgtctagcttgatggaggagctcctacttaacgaacatccaagtgcgttc
cgtgccgacttcgccatgtccatcgatgctcttaccacatggctagcagaggacccatcc
ttcgagcttgggaagcgtgtgctcggcaaccttcaggtaccatccaacgagccgatgctt
acgccaccaggatccggacacaaggatcaacttgaatatgtcttcgatgagtgggtgcat
ctccaaatggaaagcatgccaaagaagacagttggcgcattcatctaccagctccaccag
cagaaggtgatggaaactcaggaatcatctgttgcattcattcgcacctgcatcgactct
tcagtagccgcatacgaacaggaacattccgcaccgtttggtaacggtaatgaagacatt
gcgaccgtcaagatcgatgcacttggccgactagtggtggaccttgtcgtttaccaaggc
gagcaagacggagctgtcaaggaaagcaaggctaggtatctggatcagatactcgtcgtt
gtcgtgctcgttctctgcaaccatcacagcacacgaggcgatgccttcaaccagaaggtc
ttcttcaggttgttctctgccatccttttccacctgaacgacgcggtaaaggaagaggct
ctagctgaccagaaggctgacgtcttccttgctgtagccagggctttgttggttctccaa
ccctcgcacctccagcgattcacattctcgtggctggcactagttgctcaccgtatcttc
gtacctgctatgctagaagagggccaaggagacaagcgatgggacgtctacgctcagctt
atcgagacgctcttgatctttacgggcaagctcatcaagcctacaggagagacggtcatg
gctgaacagttctaccgcggtgtcctgcgagttctgctagtgatacaccacgacttccct
gagttcctggtcgagaaccacttccggttctgcaacagtattcccatgcactgcacacaa
ctccgcaatctcattgtcagcgcctacccttccaccatcctcgaaatgccagacccgttc
acagctggacttaaagctgatcgactagagcatgaccttcaagcaccggtcatccgtgcc
gacatcgcgcaggtgctttcagatgcaggtatcaaggatgctatagacaacctcctaaag
ggctcagagttgaagaacaaggacgttgacaaggtgtgccaagcagtctactacgcagag
gctcaatcagcagcgtttgagctcgtctccacgacagcgaacccaacgttgatacatgca
attactctgtacattggcatcgcgactctagggaccggtcccgctagcgttccgatcttt
gatgcagagagcccagctaccaaggtcatcgagaggcttgtcaaagacttccacccggag
gccaggttccacttcatcagcgccatcgcgaaccagctccgcttcccgaacacgcatact
catttctacagctacatgctgctccacctcttcggaccccctaacgacgattcgctcgca
ttggagatccaagagaccattacccgcgtgttattagagcgcctgctagtccaccgccca
catccctggggactcattatcacgctgttggagatcttgaagaacccaacctacacgttc
tgggacttgccgtttgtcaaagcagctcctgaagttgagcggttgcttaatgcactgttt
acgcatgcgcaggcgagtccgcgtccgctggcttag
DBGET
integrated database retrieval system
