KEGG   Apteryx mantelli mantelli (North Island brown kiwi): 106495391
Entry
106495391         CDS       T04298                                 
Name
(RefSeq) tetratricopeptide repeat protein 37-like
  KO
K12600  superkiller protein 3
Organism
aam  Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aam00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106495391
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aam03019]
    106495391
Messenger RNA biogenesis [BR:aam03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     106495391
SSDB
Motif
Pfam: TPR_1 TPR_16 TPR_2 TPR_11 TPR_14 TPR_12 TPR_19 TPR_8 TPR_CcmH_CycH TPR_9 TPR_17 TPR_7 TPR_15 ANAPC3 ARM_TT21_C ARM_TT21_N DUF3856 BTAD SHPRH_helical-1st ARM_TT21 TPR_Slam PknG_TPR TPR_20 TPR_5 HAT_Syf1_M
Other DBs
NCBI-GeneID: 106495391
NCBI-ProteinID: XP_013811307
LinkDB
Position
Un
AA seq 695 aa
MKLGYSMSNGNVLGDKQKWCDVCNKLVELYRQEKKYLEVARTWHKLIQIKQEGGADNAEL
HQLWKKMIQLLAESTQNQDNETEQLLLTAFEHAVNSSDSVPSEDPKQLCLTLHLGLQKTS
QCPAAWWYLAQAQMKMHKHREAVLSCNQALKTVGPLESPGLQQKNFILQLKAEALIKIAD
ADAAEEAINALEQIVGASSDPLLLAFRGQAYLNEGLVDQASKISQELLLSHPDLAEAHAL
EGLIRYSQKNYEQAEKSFQNAIERRAETAEYHQYLGLTYWFMSDETKKDKGKTLTHFLKA
AKLDSYLGSVFCCLGNYYRDIAGDKSRACGCYKKAFELDGTEESGTAAVDLSVELGDMDT
ALSILNEVTEKASAGTAKWAWLHRGLYYLRTGQPSQAVADLQAALRADPKDANCWESLGE
AYLSRGSYTTALKSFTKASELNPELVYSIYRAAAIEQILGKYEDAIAAYQQILKKTKDYV
PALKGLGECYLMLARSALDKYLDGKAVDYIEQALEFFTRATKCCPDVSSLWKLLGDACTS
VHVVSPAKVNVQVLGSLLGKNADKQMLKKSELLSLGGRLFVIVVISRAASLLKNSEDTEK
YIIAMQNYGRSLCAIGQCDKAIEVYTSVPLTEFDGIVGIALAYFKKGLLQESIKAYERAL
SVAESEQDKAHILTALAIIEYKQKKVDAAKTLLFK
NT seq 2087 nt   +upstreamnt  +downstreamnt
atgaaactaggctattctatgagcaatggaaacgtcctgggtgacaagcagaaatggtgt
gatgtatgtaacaagcttgtggagctgtatcgtcaagaaaagaaatatttagaggtggct
cgaacatggcacaaacttatacaaataaaacaggagggaggtgcagataatgcagagctt
catcaactttggaagaagatgatccagttactggcagagagtacacaaaatcaggataat
gagaccgagcagttgcttttgactgcgtttgaacatgcagtgaactcttctgacagtgtt
cccagtgaagaccctaagcagctttgtttaactcttcacttaggtttgcagaagactagc
cagtgtccagcagcatggtggtatttggcacaggcacagatgaaaatgcacaagcacaga
gaagctgtcctgtcctgcaatcaagctctcaaaactgttggacctcttgagagtcctggt
cttcagcagaaaaactttatccttcagttgaaagcagaggctctgattaaaatagctgat
gctgatgctgcagaagaggccattaatgcacttgaacagattgtgggtgcaagcagtgat
ccattgcttttagctttcagaggtcaggcttatctaaatgaaggtttagtggatcaagct
tcaaagatttcacaagagcttctgttgtcccaccctgatctggctgaggcccatgctctt
gagggtttgatccgttattcccaaaagaactatgaacaggcagaaaaaagttttcaaaat
gctattgaaagaagggctgaaactgcagagtatcatcagtacctggggctcacatattgg
ttcatgagtgatgagacaaaaaaagacaaaggaaaaactctcactcacttcttgaaggct
gcaaaattggacagctacttgggaagtgtcttttgctgtttaggtaactactacagagac
attgctggagacaaaagtagagcttgtggctgctataaaaaggcttttgaactagatgga
actgaagaatcgggaacagcagctgtagacttgagtgtggaacttggagacatggacact
gctctgtcaatcttgaatgaggtaaccgaaaaagcaagtgctggtacagcaaaatgggcc
tggcttcatcgtggactttactacctgagaactggtcagccatcgcaagcagtggctgat
ttgcaggcagctctcagagctgatccaaaggatgccaactgctgggagtctctaggggag
gcctacttgagcagaggtagctatacaacagctctaaaatccttcacaaaggccagtgag
ctgaacccagagcttgtgtacagcatttacagagctgcagcaattgaacagattctaggc
aaatatgaagatgctatagctgcctatcaacaaatcttaaaaaagacaaaagattatgtg
cctgcactgaaaggacttggtgagtgctatctcatgttggcaagatcagcccttgataaa
tatcttgacgggaaggctgtggattacatagagcaggctcttgaattttttacaagggca
acaaagtgctgtcctgatgtatcttccctctggaaactgcttggagatgcatgtactagt
gtgcacgtcgtttcaccagccaaagtgaatgttcaggttctaggatcccttcttggtaaa
aatgcagacaaacagatgctgaagaaaagtgagctgctcagcctgggaggaaggttattc
gtaattgtggttatttcaagggcggcttcattgctgaaaaactctgaagatacagaaaaa
tatattatagcaatgcaaaactatggcagatcactgtgtgccattggtcagtgtgataag
gccattgaagtttacacatcagtacccctaacagagtttgatggcattgtgggaatagca
ttagcctacttcaagaagggactcttacaagaaagtattaaagcctatgagagagcgttg
tctgttgctgagtctgaacaagataaagcccatatcctgactgccttggcaataatagaa
tataaacagaagaaagtggatgctgcaaagacactgctgtttaaatg

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