Arvicola amphibius (Eurasian water vole): 119801151
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Entry
119801151 CDS
T08327
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-(apurinic or apyrimidinic site) endonuclease-like
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119801151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119801151
Enzymes [BR:
aamp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
119801151
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
119801151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
119801151
NCBI-ProteinID:
XP_038167564
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All DBs
Position
1:117227620..117228572
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AA seq
317 aa
AA seq
DB search
MPKRGKKAVAEDGEEPKSEPETKKSKGAAKKKEKEAAGEGPVLYGDPPVQKTSPSGKSAT
LKICSXNVDGLRAWIKKKDLELVKEEAPDILCLQETKCSENKLPAELQDLPGLAHQYWLA
PSDKEGYSGVGLFSRQCPLKVSYGIGEKEHDQEGRVIMAEFESFVLVTAYVPSAGRGLVR
LEYRQRWDEAFRKFLKDLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFG
EMLQDVPLADSFRHLYPSTAYAYTFWTYKMNARAKNVGWRLDYFLLSHSLLPALCDSKIR
SKALGSDHCPXTLYLAL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcgtgggaagaaagccgtagcagaagacggggaagaacccaagtcagagccg
gagaccaagaagagtaaaggggcagcaaagaaaaaagagaaagaggccgcgggagagggc
cctgtcttgtatggggaccctccagttcagaaaacctcacccagtggtaaatctgccact
ctcaagatatgctcctgaaatgtggatgggcttcgagcctggattaagaagaaagattta
gagttggtaaaggaagaagcaccagatatcttgtgcctccaagaaaccaaatgctcagag
aacaaactcccggctgaacttcaagacctgcctggactcgcccatcagtactggttggct
ccatcagacaaggaaggatatagcggtgtgggtttattttcccgccagtgcccactcaaa
gtctcttatggcattggtgagaaagaacatgatcaagaaggccgggtgattatggctgag
tttgagtcctttgtcctcgtaacagcctacgtccccagtgcaggccggggtctggtaaga
ctggagtaccgacagcgttgggatgaagcctttcgcaagtttctgaaggacttggcttcc
cgaaagccacttgtgctatgtggggacctcaatgtggctcatgaagagattgaccttcga
aaccccaaaggaaacaaaaagaatgctggcttcactccccaggagcgccaaggctttggg
gagatgctgcaggatgtcccgctggctgacagcttccggcatctctaccccagcaccgcc
tatgcgtacaccttttggacttacaagatgaatgctcgggctaagaatgtcggttggcgc
cttgattactttttgttgtcgcactctcttttacctgcattgtgtgacagcaagatccgc
tccaaggctctgggcagtgaccactgtccgntcaccctctacctcgccctgtga
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