Arvicola amphibius (Eurasian water vole): 119806310
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Entry
119806310 CDS
T08327
Symbol
Pdzd7
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ domain-containing protein 7
KO
K21882
PDZ domain-containing protein 7
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aamp03037
]
119806310 (Pdzd7)
04990 Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
119806310 (Pdzd7)
Cilium and associated proteins [BR:
aamp03037
]
Primary cilia and associated proteins
USH complex and associated proteins
119806310 (Pdzd7)
Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
119806310 (Pdzd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
119806310
NCBI-ProteinID:
XP_038173871
LinkDB
All DBs
Position
1:complement(184756757..184775325)
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AA seq
1019 aa
AA seq
DB search
MARGFTVGFDPSGLGELSSGSLSSLSSRGHLGSDSGATATRYLLRKQQRLLNGPPRGIRA
SSPMGRVILINSPIEANSDESDVIHAVRVEKSSSGRLGFSVRGGSEHGLGIFVSKVEEGS
SAERAGLCVGDKITEVNGLSLESTTMGSAVRLLTSSSCLHMMVRRMGRVPGIKFSKEKTT
WVDVVNRRLVVEKCSPTASDSSSEDGVRRIVHLYTTSDDFCLGFNIRGGKEFGLGIYVSK
VDHGGLAEENGIKVGDQVLAANGVRFDDISHSQAVEVLKGQTHIMLTIKETGRYPAYKEM
VSEYCWLDRLSNGVLQQLSPASESGSSVSSYASSAPCSSGSLPSDRMDVCLGPEEPSGCG
PGWGRADTAMQTEPDMGSHVETWCSIRPTVILRDTAIRSDGPSSTRRLDSALSESPKTAL
LLALSRPRPPITRSQSHLTLWEEKKQRKKEKSGCPGEKGALQRSKTLMSLFFKGGRQGRQ
AGDGHREAWTLDSRSPTKVRPRLDLEKAGSVGPVQKFVTWRLRRDRERGRALLSARSGSP
SGQLPNVDEQVQAWESRRPLIQDLARRLLTDDEVLAVTRHCSRYVHEGGVEDLVRPLLAI
LDRPEKLLLLRDIRSVVAPTDLGCFDSMVMPAELEAFEALKSRAVRPSALRPTRQDTPPK
RHLITPVPDSRGGFYLLPVNDCSEEDHGEIRERLGGLKVSLSASAPRHHHKGIPPLQDVP
VDAFSPRRSACTPPPQPPPVAPRPPRPNWLLTEPLSKEEVQQNESQTPAQSRSHSRSRSR
GRGKSPGRRSSPSPAPITTATTANGRYHRPRKARPLLPRPLDGQEAKVEARQGPLENGVN
GTVEMTRKASTGELRTVTLSKMKQSLGISISGGIESKVQPMVKIEKIFPGGAAFLCGALQ
AGFELVAVDGESLEQVTHQRAVDTIRRAYRNKAREPMELVVRVPGPGLLPLSSASLAFKD
QSLPSDGSSAHGPLDNTPAHHQLPPPEAGQLQQTPSPALQAPYSTSKLSPLKGSHDPSH
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtggtttcacagtgggctttgacccatcaggtctaggagaactgagctctggc
tctctgagctccctctcctcccgaggccatctgggcagcgactcgggcgccacagcaaca
cgatacttgctgaggaagcaacagcgcctgctgaatggccccccccggggaatccgagcc
tcatcacccatgggccgagtcatcctcatcaactcccccattgaagccaacagtgacgag
agtgacgtcatccacgcagttcgggtggagaagagctcctctgggaggctgggtttcagt
gtgagaggcggctccgagcatggcctgggcatctttgtcagcaaggtggaggaggggagc
agtgcagagcgggctggcctgtgtgtgggggacaagatcacggaggtgaacggactgagt
ctggagagcaccaccatgggcagtgccgtgaggctgctgaccagcagcagctgcctgcac
atgatggtgcggcgcatgggccgtgtgcctggcatcaagttctccaaggagaagaccaca
tgggtggatgtggtgaaccggcggctggtggtggagaagtgtagtccaacagcatcggac
agcagctcagaagacggtgtgcggcgcatcgtccacctctacacgacctccgatgacttc
tgcctaggcttcaacatccgcgggggcaaggagttcggtctgggcatctatgtgtctaaa
gtggaccatggtgggctggctgaggagaacggcatcaaagtgggggaccaggtcctggca
gccaacggtgtcaggtttgatgacatcagccacagccaggccgtggaggtgctgaagggc
caaacgcacataatgttgaccatcaaggagaccggccggtaccctgcctacaaagagatg
gtttctgagtactgctggctggatagattgagcaacggggtactgcagcagctgtcccca
gcctctgagagtggttccagcgtctcctcctatgcctccagtgccccctgcagctcaggc
tcactgccctctgaccgcatggatgtctgtctggggcccgaggagcccagtggctgtggc
ccaggctggggacgggcagacacagccatgcagactgagcccgatatgggcagccatgtg
gaaacttggtgcagcatccggccaactgtcatcctcagggacacggccatccgctctgat
ggtccctcttctacccgacgccttgattctgcactttcagagtcgcccaagactgctctg
ctgctggccctgagccgacccaggcctcccatcacacggtcccagagtcacctgacactg
tgggaggagaagaaacagcggaagaaggagaagtcagggtgccccggggagaagggggcc
ttgcagcgctccaagacactgatgagcctcttcttcaagggagggcggcaggggcggcaa
gcaggggacgggcacagagaggcctggacactggacagtagaagccccaccaaagtccgc
cctcgcctggacctggagaaagcagggagcgtggggcctgtgcagaagtttgtcacctgg
agactgagacgtgatcgggagaggggccgggccctgctctctgccaggtctggaagcccc
tccggccagctgcccaatgtggatgagcaggtgcaggcctgggaaagtcgacggcccctc
attcaggacctggcccggcgactgctgacagacgatgaagtactagcggtcactcgccac
tgctcccggtatgtccatgagggtggtgtggaggacctggtgcgccccctgctggccatc
ctggacaggccggagaagctgctgctgctgagggacatcaggagtgtggtggcccccacg
gacctcggctgctttgatagcatggtgatgcctgcggagttggaggcttttgaggctctc
aagagcagggcagttcggccttctgctttgagaccaaccaggcaagacacgccacccaag
cgtcacctcatcacccctgtgcctgacagccgtggaggcttctacttgctgccagtgaat
gactgctcagaggaagaccatggcgagatccgggagaggctggggggccttaaggtctcc
ctcagtgcctctgcccctcgccaccaccataaaggaatcccccctctacaagatgtacca
gttgatgccttctctcctcgccgcagcgcatgcacaccccctccccagccgcctcctgtg
gctccccggcctcccaggcctaactggttactgacagaacccctaagcaaagaggaggtt
cagcagaacgagagccagaccccagcccaaagccgcagtcacagccgcagccgcagccgg
ggtcgaggcaagtcccctgggcgcaggagctccccatccccagcacccatcaccactgcc
accacagccaacgggcgttaccacaggcctcggaaggcaaggcccttgcttccacgacct
ctggacgggcaggaggccaaagtggaagctaggcaagggcccttggagaatggagttaat
gggacggttgagatgaccagaaaagcctccactggagagctgaggacagtcacgctatct
aagatgaagcagtctttgggcatcagcatctctgggggtatcgagtccaaggtgcagccc
atggtgaagatagagaagatcttcccaggaggcgctgctttcctctgcggggccctgcag
gctggcttcgagctggtggcagtggatggagagagtctggagcaggtgacccaccaacga
gccgtggacaccattcgcagagcatatagaaacaaggctcgggagcctatggagcttgtg
gtcagggtccctgggcctggcctgctgcccttatcctctgcttcgttagccttcaaggac
cagagccttccctctgacggttcctctgcccacggaccccttgacaataccccagcccac
caccagctgccaccccctgaggctgggcaactacagcagactcccagcccagcccttcag
gctccttacagcacctccaaactctcccctcttaagggttcccatgacccttcccactga
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