Arvicola amphibius (Eurasian water vole): 119807577
Help
Entry
119807577 CDS
T08327
Symbol
Slc6a11
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04082
Neuroactive ligand signaling
aamp04721
Synaptic vesicle cycle
aamp04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
119807577 (Slc6a11)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
119807577 (Slc6a11)
04721 Synaptic vesicle cycle
119807577 (Slc6a11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aamp02000
]
119807577 (Slc6a11)
Transporters [BR:
aamp02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
119807577 (Slc6a11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
119807577
NCBI-ProteinID:
XP_038175533
LinkDB
All DBs
Position
2:complement(33802460..33925409)
Genome browser
AA seq
628 aa
AA seq
DB search
MTAEQALPLGNGKAAEEARGSEALGGGGGGGAAGTREARDKAVHERGHWNNKVEFVLSVA
GEIIGLGNVWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGITCWRK
VCPLFEGIGYATQVIEAHLNVYYIIILAWAIFYLSNCFTTELPWATCGHEWNTEKCVEFQ
KLNVSNYSHVSLQNATSPVMEFWERRVLAISDGIEHIGNLRWELALCLLAAWTICYFCIW
KGTKSTGKVVYVTATFPYIMLLILLIRGVTLPGASEGIKFYLYPDLSRLSDPQVWVDAGT
QIFFSYAICLGCLTALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQG
VPIAEVAESGPGLAFIAYPKAVTMMPLSPLWATLFFMMLIFLGLDSQFVCVESLVTAVVD
MYPKVFRRGYRRELLILALSIISYFLGLVMLTEGGMYIFQLFDSYAASGMCLLFVAIFEC
VCIGWVYGSNRFYDNIEDMIGYRPLSLIKWCWKVVTPGICAGIFIFFLVKYKPLKYNNVY
TYPAWGYGIGWLMALSSMLCIPLWICIKVWKTEGTLPEKLQKLTVPSADLKMRGKLGASP
RTVTVNDCEAKVKGDGTISAITEKETHF
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgactgcggagcaggcgctgcccctgggcaacgggaaagcggccgaggaggcgcggggg
tccgaggcgctgggcggcggcggcggcgggggcgcggcggggacgcgcgaggcgcgcgac
aaggcggtccacgagcgcggccactggaacaacaaggtggagttcgtgctgagcgtagct
ggcgagatcatcgggctaggcaacgtgtggcgcttcccctacctgtgctacaagaacggc
ggaggggcattcctgattccctatgtggtgttcttcatctgctgtggaattcccgtcttc
ttcctggaaacggctctggggcagttcacaagtgaaggaggcattacctgctggaggaaa
gtctgccctttatttgaaggcattggctacgcaacacaggtgatcgaggcgcacctcaat
gtctattacatcatcatcctggcgtgggccatcttctacctaagcaattgcttcaccacc
gagctcccctgggccacctgtgggcacgagtggaacacagagaaatgtgtggagttccag
aagctgaatgtcagcaactacagtcatgtgtccctgcagaatgccacctccccggtcatg
gaattctgggaacgccgggtcttggctatatctgatggtattgagcacattgggaacctc
cgttgggagctggcattatgtctcctggcggcttggaccatctgctacttctgcatctgg
aagggaaccaagtcgactggaaaggtcgtgtatgtcactgcaaccttcccctacatcatg
ctgctgatcctcctgatccgaggtgtcacattgccaggtgcctctgaaggcatcaagttc
tatctgtacccggacctctcccggctctctgatccacaggtgtgggtggacgctgggacg
cagatctttttctcctacgccatctgcctgggctgcctgaccgctctggggagttacaac
aactataacaacaactgctacagggactgtatcatgctctgctgtcttaatagtggcacc
agctttgtggctgggttcgccatcttctccgtcctgggcttcatggcgtatgagcaagga
gtgcctattgctgaggtggcagagtcaggtcctggactggctttcattgcctaccccaaa
gctgtcacgatgatgcccctctccccattgtgggccaccttgttcttcatgatgctcatc
ttcctgggcctggacagtcagtttgtgtgcgtggagagcctcgtaactgccgtggtagac
atgtaccccaaggtcttccggcggggctaccggcgagaactgctcatcctggccctgtcc
atcatctcctatttcctaggcctggtgatgctgacagagggaggcatgtacatcttccag
ctttttgactcctatgctgccagtggcatgtgcttgctttttgtggccatctttgagtgt
gtttgcatcggctgggtgtatggaagcaaccggttctatgacaacatcgaggacatgatt
ggctaccggccactgtcactcatcaagtggtgctggaaagttgtgacccctgggatctgt
gcgggcatcttcatcttctttctggtcaagtacaaacctctcaagtacaacaatgtgtac
acatacccggcttggggttacggcattggttggctcatggctctgtcctccatgctatgc
atcccgctctggatctgcatcaaggtgtggaagacagagggcacccttcccgagaaatta
cagaagttgacagtccccagcgccgatctgaaaatgcggggcaagcttggggccagccca
cggacggtgaccgttaatgactgtgaggccaaggtcaagggcgacggcaccatctctgcc
atcacagagaaggagacacacttctga
DBGET
integrated database retrieval system
