Arvicola amphibius (Eurasian water vole): 119811273
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Entry
119811273 CDS
T08327
Symbol
Irf1
Name
(RefSeq) interferon regulatory factor 1
KO
K09444
interferon regulatory factor 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04625
C-type lectin receptor signaling pathway
aamp04668
TNF signaling pathway
aamp04917
Prolactin signaling pathway
aamp05133
Pertussis
aamp05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
119811273 (Irf1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
119811273 (Irf1)
09152 Endocrine system
04917 Prolactin signaling pathway
119811273 (Irf1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
119811273 (Irf1)
09171 Infectious disease: bacterial
05133 Pertussis
119811273 (Irf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamp03000
]
119811273 (Irf1)
Transcription factors [BR:
aamp03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
119811273 (Irf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
119811273
NCBI-ProteinID:
XP_038180937
LinkDB
All DBs
Position
4:complement(67192976..67199946)
Genome browser
AA seq
326 aa
AA seq
DB search
MPITRMRMRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAI
HTGRYKIGEKEPDPKTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVRVYRMLPPLTKNQR
KERKSKSSRDTKSKAKRKLCGDASPDTFSDGLSSSTLPDDHSSYTTQGYLGQDLDLEQHD
LTPALSPCVVSSTLPEWHMQDIMPDSTSDLYNLQVSPMPSTSEAATDEDEEGKLPEDIMK
LFEQSEWQPTNVDGKGYLLNEPGAQPSSVYGDFSCKEEPEIDSPGGDIGMGLPRSFTSVD
SIWMDNINMLPSAVRLPPIQAISCAP
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcctatcactcggatgcgaatgagaccctggctagagatgcagattaattccaaccaa
attccgggactgatctggattaataaagaagagatgatcttccagatcccatggaagcat
gctgctaagcacggctgggacatcaacaaggatgcctgtctgttccggagctgggccatt
cacacaggccgatacaaaataggagaaaaggaaccagatcccaagacatggaaagcaaac
ttccgttgtgcgatgaactccctgccagacatcgaggaagtgaaggaccagagcaggaac
aagggcagctcggctgtacgagtgtaccggatgctgccacccctcaccaagaaccagagg
aaagagagaaaatccaagtccagccgagacactaagagcaaggccaagaggaagctctgt
ggagatgccagccctgacaccttctctgacggactcagtagctccacactgcccgatgac
cacagcagctacacaactcagggctacctgggtcaggacttggacctggagcagcatgac
cttactccagcactgtcgccctgtgtcgtcagcagcactctcccggagtggcacatgcag
gacattatgccagacagtaccagcgatctgtataacttgcaggtgtcgcccatgccctcc
acctctgaagctgccacagatgaggacgaggaagggaagttacctgaggacatcatgaag
ctctttgagcagtccgaatggcagccaacaaacgtggatggcaagggatacttgctcaat
gaaccaggagcccagccttcttctgtctatggagacttcagctgcaaggaggaaccagag
attgacagccctggaggggacattgggatgggcctaccacgatccttcacaagtgtggac
tccatctggatggacaacataaacatgctgccctccgctgtcaggctgccccccattcaa
gctatttcttgtgcaccatag
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integrated database retrieval system
