Arvicola amphibius (Eurasian water vole): 119811855
Help
Entry
119811855 CDS
T08327
Symbol
Polb
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03410
Base excision repair
aamp05166
Human T-cell leukemia virus 1 infection
aamp05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119811855 (Polb)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
119811855 (Polb)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
119811855 (Polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119811855 (Polb)
Enzymes [BR:
aamp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
119811855 (Polb)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
119811855 (Polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
119811855 (Polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
DNA_pol_B_thumb
HHH_5
Cdd1
HHH
HHH_2
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
119811855
NCBI-ProteinID:
XP_038181917
LinkDB
All DBs
Position
4:148184477..148211783
Genome browser
AA seq
335 aa
AA seq
DB search
MSKRKAPQETLNGGITDMLVELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAK
KLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVTGIGPSAARKFVDEGIK
TLDDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLGEVKRVDPEYIATVCGS
FRRGAESSGDMDVLLTHPNFTSESSKQPKLLHRVVEQLQKVHFITDTLSKGETKFMGVCQ
LPSKDDGKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRP
LGVTGVAGEPLPVDSEQDIFDYIQWSYREPKDRSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacgcaaggcgccgcaggagaccctcaacggcggcatcacagacatgctcgtg
gaactcgcaaactttgagaagaacgtgagccaggcaatccacaagtacaacgcgtacaga
aaagcagcatctgttatagcaaagtacccacacaaaatcaagagtggagcagaagctaag
aaattgccgggagtaggaacaaaaattgctgaaaagatcgatgaatttttggcaactgga
aaactgcgtaaacttgaaaagattcgtcaggatgatacaagttcgtccatcaatttcctg
actcgggttactggcattgggccatctgctgcaaggaagtttgtagatgaaggaattaaa
acattagacgatctcaggaaaaatgaagataaattgaaccatcatcaacgaattgggcta
aaatattttgaggactttgaaaaaagaattcctcgtgaagagatgctgcagatgcaagat
attgtacttggcgaagttaaaagagtggatcccgaatacattgctacagtctgtggcagt
ttcagacgaggggcagagtccagcggagacatggatgttcttctgacccacccaaacttc
acctcagagtcaagcaaacagccgaagctgttacatcgtgttgtggagcagttacagaaa
gtccatttcattacagacactctgtcaaagggcgaaacaaagttcatgggtgtgtgccag
cttcccagtaaagatgatggaaaggagtatccacacagaagaattgatatcaggttgatc
cccaaagatcagtattactgcggtgttctctacttcactgggagcgacatctttaataag
aatatgagagcgcacgccctagaaaagggcttcacgatcaatgagtacaccatccgcccc
ctgggggtcactggagttgctggggagccccttcctgtggacagtgagcaggacattttt
gattacatccagtggagctaccgggagcccaaggatagaagcgaatga
DBGET
integrated database retrieval system
