Arvicola amphibius (Eurasian water vole): 119814019
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Entry
119814019 CDS
T08327
Symbol
Cdx1
Name
(RefSeq) homeobox protein CDX-1
KO
K09312
homeobox protein CDX1/4
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamp03000
]
119814019 (Cdx1)
Transcription factors [BR:
aamp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
119814019 (Cdx1)
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GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
SUIM_assoc
YdaS_toxin
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
119814019
NCBI-ProteinID:
XP_038185193
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All DBs
Position
5:complement(135516739..135533154)
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AA seq
268 aa
AA seq
DB search
MYVGYVLDKDSPVYPGPARPSSLGLGPPAYAPPGPAPAPPQYPDFAGYTHVEPAPAPPPT
WAAPFPAPKDDWAAAYGPGPAAPAASPAPLAFGPPPDFSPVPAPPGPGPGLLAQSLGGPG
APSSPGAQRRTPYEWMRRSVATAGGGGSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYIT
IRRKSELAANLGLTERQVKIWFQNRRAKERKVNKKKQQQQQPLPPSQLPLPLDDNPTPSG
PPLGSLCPTNAGLLGTPSPVPVKEEFLP
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgggctatgtgctggacaaggactcccccgtgtatccaggccccgccaggccc
tccagcctcggtctgggccctccggcctacgcgcccccaggcccggcgcccgcacccccg
cagtaccccgacttcgcgggttacacgcacgtggagccggcgcccgcgccccctccgacc
tgggccgcgcccttccctgcgcccaaggacgactgggcagctgcatatggcccgggcccc
gcggcccccgccgccagcccggccccgctggcctttgggccccctccggactttagcccg
gtgccagcgcctcccgggcctggtcctggcctcctggcgcagtccctcggcggcccgggt
gcaccgtcctcgccaggagctcagagacggacgccctacgaatggatgcggcgcagcgtg
gcgaccgcaggcggtggtggcagcggtaagactcggaccaaggacaaataccgagtggtt
tacacagaccaccagcgcctggagctggaaaaggagttccactatagccggtacatcacc
atccgacgcaagtccgagttggctgctaacttggggctcacagagcggcaggtaaaaatc
tggttccagaaccgtcgagccaaggagcgcaaagtgaacaagaagaaacagcaacagcag
cagccactgcctccctcgcagctacccctgcccctggatgacaaccccacaccatcaggg
ccacccctgggtagtctatgccccaccaatgctggccttctgggtaccccctccccagtg
cctgtcaaggaggaatttctaccctag
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