Asterias amurensis (Northern Pacific seastar): 139938953
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Entry
139938953 CDS
T10870
Name
(RefSeq) serine/arginine-rich splicing factor 1A-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139938953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aamu03041
]
139938953
Spliceosome [BR:
aamu03041
]
Common components
Common spliceosomal components
SR proteins
139938953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
DUF2457
Motif
Other DBs
NCBI-GeneID:
139938953
NCBI-ProteinID:
XP_071790736
LinkDB
All DBs
Position
6:complement(10678170..10686112)
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AA seq
275 aa
AA seq
DB search
MAYYGRGGGGGGGSSRGRDSGSPTDGRIYVGNLPPDIRDKDIEDIFFKYGRINKIDLKNK
SVGPPFAFVEFEDKRDAEDAIYYRNGYDYDGYQLRVECPRNTGSRGGGGGYSGGGGGGGG
GGGGGGGGGRRGGPPPRRSHFRCVVSGLPSTGSWQDLKDHMREAGDVCYADVHRDCTGVV
EYVSEEDMRYAVKTLDDSKFRSHEGDQSYIRVKADYSRSSRSRSRSPISKRHYSPKRSPR
RSHSPKRHYKRSYSRSRSRSPSRSKGHSHSRSHSR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactacggccgaggtggtggtggtggcggaggctcatcgcgcggccgtgacagt
gggagtcccacagacggccgaatctacgtcggtaatctacctcctgatatccgtgacaaa
gacatcgaagacatcttcttcaagtatggtagaatcaacaaaattgacttgaaaaacaag
tctgttggaccacctttcgcctttgtggagttcgaggacaaaagggatgcagaagatgct
atttactacagaaatggttatgattatgatggttatcaactccgtgttgagtgccctcgt
aatactggctccaggggcggcggcggcgggtacagtgggggcggtggtggtggaggagga
gggggtggtggtggcggcggaggtggaaggagaggcggtcctccacccaggaggtctcat
ttcaggtgtgtcgtgtcaggactcccctccaccggtagctggcaggacctgaaagaccac
atgcgtgaagccggtgatgtttgctacgctgacgttcatcgagattgcaccggtgtagta
gagtacgtgagtgaggaagacatgcgctatgccgtcaagaccttagatgactcaaagttt
cgctctcatgagggtgatcaatcgtacatccgtgttaaggccgactacagccgctccagt
cgttcccgaagtcgctctcccatcagcaagcgacactacagcccgaagcgaagtcctcga
cgctcccacagtccaaagcgtcactacaagcgttcatactctaggtcccgatctcgcagt
cccagtcgctccaaggggcactcccacagtcgctcacactctcgctaa
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