Asterias amurensis (Northern Pacific seastar): 139952462
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Entry
139952462 CDS
T10870
Name
(RefSeq) uncharacterized protein isoform X1
KO
K08131
collagen type IX alpha
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu04512
ECM-receptor interaction
aamu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139952462
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139952462
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aamu00535
]
139952462
Proteoglycans [BR:
aamu00535
]
Extracellular matrix (ECM) proteoglycans
Others
139952462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
139952462
NCBI-ProteinID:
XP_071807698
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Position
20:complement(4648848..4683669)
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AA seq
986 aa
AA seq
DB search
MRTNGFSRWPTRPKLFVESLLVITLLHGYGVIAQQLSTLECPDDIRIGENDLPGWDVIRL
FTLDNQASGIKEIPGSNEYQTAYKINKKSDLVRFPTSALFPDGIPDEFSFVSTFKMSPAA
REEDWLLWQIRDRAKVPQLAFRLNGEQKALQIVYVDTERQLQSVSFRDVEALFDGDWHKL
HIIMLRDRVTVFVDCKIVSSTLITPRGVVDYTGKISIGRTLQDDQPVPFELQWMIIHCDP
SRPERDNCDELPLPPVGPPTGQCEQVCPAGPIGPEGPAGAPGRPGQTGAPGAPGAQGQQG
RDGLPGSIGFRGEPGTSGPPGQPGPRGDPGPMGIDGINGERGEKGEPGFSGQTGPEGPQG
QTGFPGEPGPRGPAGDFTNIEDLVKELGLLKGEQGSPGLPGLNGVPGENGVRGPRGGRGQ
QGAPGLDGKDGASGIQGVQGPAGPQGPPGPPGRPGTESEFSQGPTEIVGPPGPPGPPGPR
GVQGIQGETGPRGDPGRPGQTGDKGDEGLQGSLGKTGETGKMGVQGVQGVPGPRGDKGER
GIQGLIGIQGPTGIVGPRGNDGPRGSPGPPGIAGAKGSLGNTGSPGLPGMKGEKGSAGLA
GSRGTDGTDGQRGAKGDDGERGSPGPLGHMGPPGPIGDPGPEGEVGDPGRKGDSGLQGPR
GVPGLQGPKGQIGVFGPEGPKGERGQPGIQGIKGQVGPKGKIGSAGVIGPPGLKGSMGIA
GPPGSRGEEGQKGDKGSAGERGNTGRHGESGKTGPVGPPGLDGLKGSRGDPGQAGPRGPT
GLRGATGTDGSKGEAGIRGYPGSTGEPGQPGRTPSDDDIAKIVERVLQSQMQNIASRMTG
PPGPPGLALRGSPGLRGNQGPSGAPGNKGLPGEPGLQGFRGERGDTGPDGPRGTRGPRGD
KGNKGLGHRGYPGHMGLPGLPGEPGIARDGKDGAPGPRGPGGVRGTRGPAGPQGAAGYCE
YCNYPGAQPLVNPYPYQTYVDLNNKG
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgaggactaacgggttttcaagatggccgacgaggccgaagttgtttgtagaatcctta
cttgtcatcactttattacatggctatggagtaatcgcacagcaactgagtacactggag
tgcccagatgacatcagaatcggggaaaatgacttaccaggatgggacgtgattaggctg
tttacattagacaatcaggcatctggaattaaggaaatacctgggtctaatgagtatcag
acggcgtataaaatcaacaaaaagagtgacctggttcgattccctaccagtgcgttattc
ccggatggcatccctgatgagttctcctttgtctcaaccttcaagatgagtccagcagct
cgggaggaagattggctcttgtggcagatccgagatcgagccaaggtcccccagttggct
ttcagactcaatggagagcagaaagcgcttcagatcgtctacgttgacacagagaggcag
cttcagagcgtcagcttcagggatgttgaagcgctgtttgacggtgactggcacaagctt
cacattatcatgctgcgcgatcgtgtgacagtgtttgtcgattgtaagattgtctcatcc
accttgatcacccctcgtggcgttgttgactacaccgggaaaatcagcattggcagaaca
cttcaggatgatcaacctgtaccgtttgagcttcagtggatgataatacactgtgacccc
tcacgaccagaacgagataactgtgatgaactaccgctaccaccagtgggtccgccgaca
gggcagtgtgaacaagtttgtcctgcaggacctattggaccagagggcccagcgggtgca
cctggacgtccagggcagactggagcaccgggggcaccaggtgcccaggggcaacaaggc
agggatggactaccaggttcaatcggattcaggggggagcctggcacatctggcccacca
ggacagccaggcccaaggggtgatccaggaccaatgggtatagatggtatcaatggagag
cgcggtgaaaagggtgaaccaggttttagtggtcagactggaccggaaggaccccagggt
caaacaggattcccgggtgagcctggcccccgaggacctgctggggacttcaccaacatt
gaggatcttgtgaaggaacttggcctactgaagggtgagcagggatcaccgggtctgcct
ggcttgaatggagttccgggtgaaaacggtgtacgcggaccacgtggaggtagaggccaa
cagggagcacctggtcttgacggtaaggatggagcttcaggaattcaaggagtacaggga
cctgctggacctcaaggaccaccaggcccacctggtagaccggggactgaatcagaattc
tcacaagggccgacagagattgtggggccacctgggccacccggacccccaggcccacgg
ggagttcaaggaatacagggagagaccggacctagaggggatcctggaagaccaggacaa
actggtgataagggtgacgagggtctccaaggatctcttgggaagaccggtgaaacagga
aaaatgggagtccagggtgttcaaggagttccaggcccacgaggtgacaaaggagagagg
ggaattcaaggcctcattggtattcaaggacctactggtattgttggacctaggggaaac
gatggcccacgaggttccccaggccctcctggtattgcaggagccaagggttctcttggt
aacacaggatcccctggtcttccaggaatgaaaggagaaaagggaagcgcaggtcttgca
ggctcacgaggaacagatggtaccgatggtcaaaggggagctaaaggtgacgatggagaa
cgaggctcaccgggtcctcttggacacatgggaccacctggaccgattggtgaccctgga
ccagagggtgaagtaggagaccctggtaggaaaggagattccggccttcaaggacccaga
ggagttccaggtttacaaggtcctaaaggacagattggtgtgtttggacctgaaggcccc
aaaggagagagaggtcaacccggtatacaaggcatcaagggacaagttggacctaagggt
aagattggtagcgccggtgtcattggtccgccaggcttgaagggatccatgggtattgca
ggacccccgggctcacgaggtgaagagggacagaagggagacaagggatctgctggtgag
agaggaaacacaggacggcatggggagtctggtaaaacagggccagtaggtcctcctgga
ctggatggattaaaaggctctcgtggtgaccctggtcaagcaggtcctagaggtccaacc
ggtcttagaggagcaacaggtacagatggaagtaagggtgaagccgggatcagaggttac
cctggatctacaggggaaccaggtcagccgggtcgtacaccatcagatgacgatattgcc
aaaatagtggaaagagtactgcagagtcagatgcaaaatatagcgtcccgtatgaccggc
ccaccaggtcctcctggtttagcgctccgtggaagcccaggtctacgaggaaaccaaggc
ccgtcaggtgccccaggaaataagggtcttcctggagagccaggccttcaaggattccgt
ggagaacgtggtgatacgggacccgatggaccaagaggtacaagaggacctcgtggtgac
aaaggaaacaagggacttggtcacagaggctatccaggacacatgggcttaccaggttta
ccaggagagcctggaatcgctagggacggtaaagatggcgctccaggccctcgtggtcct
ggtggtgtccgaggtacaagaggtcctgctggtccgcagggtgcagctggctactgcgaa
tattgtaactatcctggagcccagcctttggttaacccttacccatatcagacatatgtc
gatctcaacaacaaaggctag
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