Anoxybacteroides amylolyticum: GFC30_49
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Entry
GFC30_49 CDS
T04397
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aamy
Anoxybacteroides amylolyticum
Pathway
aamy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aamy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GFC30_49 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aamy03021
]
GFC30_49 (rpoA)
03400 DNA repair and recombination proteins [BR:
aamy03400
]
GFC30_49 (rpoA)
Enzymes [BR:
aamy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GFC30_49 (rpoA)
Transcription machinery [BR:
aamy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GFC30_49 (rpoA)
DNA repair and recombination proteins [BR:
aamy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GFC30_49 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
SAM_EPH
PASTA
RAD51D_N
DUF961
Motif
Other DBs
NCBI-ProteinID:
ANB61494
UniProt:
A0A167TMN3
LinkDB
All DBs
Position
complement(46930..47874)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEISEDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTIEGVVEDVTAIILNVKKLALKIYSDEEKTLEIDVQGEGVVTAADITHDSDVEI
LNPDLHIATLAEGGHLRMRMTAKRGRGYTPADANKREDQPIGVIPIDSIYTPVSRVAYQV
ENTRVGQVTNYDKLTLDVWTDGSIGPKEAVSLGAKILTEHLNIFVGLTDEAQNAEIMIEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELAQKTEEDMMKVRNLGRKSLEEVK
AKLEELGLGLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaatcgaaaagccaaaaatcgagacggttgaaatcagcgaagatgccaagtac
ggcaaattcgtcgttgaaccacttgagcgtggatatggtacaactttgggtaactcctta
cgtcgtatcctattatcctcactccctggtgccgctgtgacatctattcaaatagatgga
gtactgcatgagttctcaacaattgaaggcgtcgtagaagatgtgacagcaatcatttta
aacgtaaagaaacttgcgttgaaaatttactctgacgaagaaaagacgcttgaaattgat
gtacagggtgaaggagttgtcacggctgctgatattactcacgatagcgatgtagaaata
ttaaacccggaccttcatattgctacgttggctgagggcggccatcttcgcatgagaatg
acggcaaaacgaggacgtgggtatactccagctgatgccaataaacgcgaggatcagcca
ataggtgttatccctatcgattcgatttatacaccagtatcgcgcgtagcttatcaagtg
gaaaacactcgtgtcggtcaagtcacgaattatgataagctgacgctagatgtttggaca
gacggaagcatcggtccaaaagaagctgtttcgcttggagcgaaaattttaacagagcac
ttgaacattttcgttgggttgacagatgaagcacaaaatgcggaaatcatgatcgaaaaa
gaagaagaccaaaaagaaaaagtgctcgaaatgacgattgaagaacttgatttgtctgtt
cgttcttataactgtttaaaacgtgcgggtattaacactgtccaagaacttgcacaaaaa
acagaagaagatatgatgaaagtacgtaacctaggtcggaaatcgcttgaagaagtaaaa
gcgaaactcgaagaacttggattaggcttacggaaagatgactag
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