Anguilla anguilla (European eel): 118214208
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Entry
118214208 CDS
T07545
Name
(RefSeq) collagen alpha-1(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang04510
Focal adhesion
aang04512
ECM-receptor interaction
aang04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118214208
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118214208
09142 Cell motility
04820 Cytoskeleton in muscle cells
118214208
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aang04147
]
118214208
00536 Glycosaminoglycan binding proteins [BR:
aang00536
]
118214208
Exosome [BR:
aang04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118214208
Glycosaminoglycan binding proteins [BR:
aang00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118214208
Hyaluronan
Extracellular matrix or blood plasma proteins
118214208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
DUF1194
Motif
Other DBs
NCBI-GeneID:
118214208
NCBI-ProteinID:
XP_035249813
LinkDB
All DBs
Position
15:6136248..6165990
Genome browser
AA seq
1010 aa
AA seq
DB search
MALSASILALLCSLFVGARAQLARQKFQECPVDLFFVLDTSESVALRAKPPEFYIDQIKT
FTKNFIDALKDTRQPCDRFVTWNSGALHYSDDIILIRELSELNTQRNELKKDVDGISYIG
KGTYTDCAIKRGIAELLIGGSHYHENKYIVVVTDGHPVTGYKEPCGGLQEAANEARQHGI
KVFSVAVTPDQEDTRLSVIATNTNYRQNFTAADGVMSTQLKTIHTIINMITNETKDVCCS
FDCAARSGPGGPGGDDGSKGESGRPGMPGEKGDFGDVGSPGDPGPVGYQGMKGDKGTRGE
KGERGHRGFKGDKGLRGIDGIDGRKGEAGFPGLAGCKGSPGPDGLQGEPGPKGDPGPYGT
KGGKGEPGKDGEPGRPGKYGPPGRKGELGVKGANGDKGERGDDGKPGPDGPRGERGTGGE
KGEQGSRGNRGTRGDKGDPGPRGEQGREGSAGPNGEPGEIGRPGPLGYRGDEGAIGPEGV
KGPRGIKGAPGDRGVMGERGEDGAPGNGTAGCHGFQGYPGPRGDPGEPGGKGTPGPKGDD
GEPGDPGADNNEPGNPGPKGLKGHRGPEGKPGLPGPPGPSGADECEILDIIMRMCSCCES
KCGPVDIVFVVDSSESIGAANFALSKDFIVTVIDRLMKDQHVRFGANESRVGVVQYSGEN
AQEVVRLGDQNINTLTELKQAVKDFRWLAEATYTGEALQYSLTNLISRIKAENSVVLVLT
DGRSDITRDSVPLNVLCNKGIRVGGLGVIDYTGRVPNQEQIEGMVCQNDLRKPGFSFVLN
NYAELLDDTFLQNLTAQICQDKKAPNYKCPIVFKADTDIILMMDSSASVGGNNFEVTRTF
VKRLADRFLASDSPNGVNVRVAVGQYSRQAAIEGEFTSSYSEVAGKIDSFAFQNAATDVT
GALDFAIQEFKRKSTGNQKRKLLIFSDGRSQGVTESLIEKKVREAQDARVEMYVLAVGSL
VNEVNLRFLASRGRAYDVIYAQRHLLRAADYPSLLRGVFYQTVSRKVSLD
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggctctaagtgcgtctattttagcccttctgtgctctctatttgtaggggcacgagct
caactggctagacagaagtttcaagagtgtcctgtggatcttttcttcgtccttgacacc
tctgagagtgtggcactgagggcaaagcccccggagttctacatcgaccagattaagacc
ttcaccaagaactttatcgatgcgctcaaagacacgcgtcaaccatgtgaccgattcgtg
acatggaactcaggtgcactgcactacagcgatgacatcatcctcattcgggaactgagt
gagctgaatacacagagaaatgagctgaagaaagacgtggatggaatctcctacattggg
aaggggacgtacaccgactgtgccatcaagaggggcatcgccgagcttctcattggtggt
tcccattaccatgagaacaagtacatagtggtggtgacggacggacaccccgtcacaggc
tacaaggagccgtgcgggggcctgcaagaggccgccaacgaagccagacaacacggcatc
aaagtgttctccgtggccgtcacacctgaccaggaggacaccaggctgtctgtaatcgcc
accaacacgaactacagacagaacttcacggccgcagatggagtgatgtccacccagctc
aaaaccatccacaccatcatcaacatgattacaaatgaaacaaaggacgtgtgctgctcc
ttcgactgtgctgctagatcaggtccaggaggccctggtggggatgatggatctaagggt
gagtccggcagaccggggatgccaggagagaagggagactttggtgacgtgggaagtcca
ggtgacccaggtcctgtcggctaccagggcatgaagggagacaaagggacaaggggtgaa
aagggtgagaggggtcacagaggattcaagggagacaaaggactgcgcgggattgatggg
attgatggacgcaagggggaggctggattcccaggcctcgcaggctgcaaaggatccccc
gggcccgatggattacagggagaaccaggtccaaaaggagatcctgggccttatggcacc
aaaggaggaaaaggagagcctgggaaagatggggagccaggaagaccaggaaaatatggc
ccacctggaagaaagggtgaactgggggtaaagggagccaatggagacaaaggagagaga
ggcgatgatggaaaaccaggaccagatggacctcgtggagaaaggggaacaggaggagag
aagggtgaacaaggttctcgtggaaacagaggaaccaggggagacaagggcgatccaggc
ccaaggggcgagcaaggacgagagggttccgccggacccaacggagaaccaggtgaaata
ggacggcctggtccacttgggtacaggggagatgagggcgccataggacctgagggagtg
aaagggccaaggggaatcaaaggagcccccggagacagaggcgtgatgggtgagagggga
gaagatggagctccaggaaatggcactgcaggatgccatggcttccaaggttacccaggt
ccaagaggagatccaggagagccgggtgggaagggtactcctgggcccaaaggagacgac
ggcgagcctggtgatcctggggcagacaacaacgagcctggaaatcccggcccgaaagga
cttaaaggccacagaggaccggaggggaagccgggactacctgggccacctggaccttcg
ggggctgatgaatgtgaaatcctggatattatcatgaggatgtgctcttgctgtgagagc
aagtgtggcccggtggacattgtgtttgtcgtggacagctcagagagcatcggggccgcc
aactttgccctctccaaggacttcatcgtgaccgtaatcgacagactgatgaaagaccag
cacgtcaggtttggcgccaacgagtcacgggtgggtgtggtgcagtacagcggggagaac
gcccaagaggtggtgcggctgggtgaccagaacatcaacaccctcacagagctcaaacaa
gctgttaaggacttcaggtggcttgctgaggccacgtacacgggagaggccctgcagtac
tccctgaccaacctgatcagccgcatcaaggcggagaacagcgtggtgctggtcctgacc
gacggccgctcggacatcacgagggacagcgtgccgctcaacgtgctctgcaacaagggg
atccgggtgggcgggctcggcgttatagattacaccgggagggtgcccaatcaggagcag
attgaaggcatggtttgtcagaatgacctcagaaagcccgggttctcttttgtgctcaac
aactatgctgagcttctggatgatacgttcctgcagaacctgacagcacagatctgccaa
gataagaaggcccccaattacaaatgtccaatcgtcttcaaggcagacaccgacattatc
ctaatgatggacagctcggccagcgtgggcggcaataacttcgaggtgacccgcacgttc
gtgaaacgcctggcggatcgcttcctggcgtcggactcgcccaacggcgtgaacgtgcgc
gtggcggtgggccagtacagcaggcaggccgccatagagggcgaattcacctccagctac
agcgaggtggccggcaagatcgactccttcgctttccagaacgccgccacggacgtcaca
ggcgccctggacttcgccatccaagagttcaagcgcaaaagcaccgggaaccagaagagg
aagctgctgatcttctcggacgggcggtcccagggcgtgacggagagcctcatcgagaag
aaggtgcgggaggcccaggacgcccgcgtggagatgtacgtgctggccgtgggcagcctg
gtgaacgaggtcaacctgcgcttcctggccagccggggccgggcgtacgacgtcatctac
gcacagcgccacctcctcagggccgccgactacccgtctctgctcaggggcgtcttctac
caaactgtgtcccggaaagtctcgctagattga
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