Anguilla anguilla (European eel): 118215314
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Entry
118215314 CDS
T07545
Name
(RefSeq) collagen alpha-6(VI) chain-like isoform X1
KO
K06238
collagen type VI alpha
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang04510
Focal adhesion
aang04512
ECM-receptor interaction
aang04518
Integrin signaling
aang04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118215314
04518 Integrin signaling
118215314
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118215314
09142 Cell motility
04820 Cytoskeleton in muscle cells
118215314
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aang04147
]
118215314
00536 Glycosaminoglycan binding proteins [BR:
aang00536
]
118215314
Exosome [BR:
aang04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118215314
Glycosaminoglycan binding proteins [BR:
aang00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118215314
Hyaluronan
Extracellular matrix or blood plasma proteins
118215314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_CoxE
Kunitz_BPTI
STAS
EF-hand_1
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
118215314
NCBI-ProteinID:
XP_035251884
LinkDB
All DBs
Position
1:57213905..57264721
Genome browser
AA seq
2701 aa
AA seq
DB search
MGAIRTLVAVLILASCLYSSGAQKTVCTQEAVADIVFLVDGSWSIGTENFQRIRAFLVSL
VDSFGVGPDQVRIGLVQYSTKPVTEFLLNAYTDKQEILQHIQNLPYRGGGTKTGLGLEFM
LSHHFAERFGSRANEGVPQFAVVITDGQSQDNVKQPAEMVKRRGITLYAIGIKDAVLEEL
QEIASDPDDKHVYSVSDFAALQGISQSVIQVLCTTVEEAKRQIAQMSLECRKATMADIVF
LVDSSSSIGPDNFQQIRLFLHDFVDGLDVGINKVRIGLAQFSSEPHQEFLLGEQMEKRVL
LEQIDKLKYRTGGTQTGKALQFLQSTYFTEAGGSRASENVPQIAVVITDGSSTDDVEAPA
QKLRKQGVIIFAIGIGDANRELQKIANSPHQHFLISIDSFQALQRVTQSFLQTVCTGVEV
QIQALAPRFADVFILVDSTAEMGKVRILLNQTVNQLNVGSEAHRIGLAQFGSDTKVEFLL
NKYRTKDEVLLHLKNQFRLRPGKDRQLGRALEHARVNFFNAAAGSRIAEGFPQFLVVITA
GQSQDSVIRAAQSIKTEGVTVISIGLPKTNRQELELIATSPYVFQTSTKSIALISEEVKG
IIESKDLTLPTGPSDCRSVRMADIVFIVEQSGSKANFQQVRNFIYRIVDGLDVSFKKVRV
GIVLYNNAPKAMVYLNSIKEKADVLQFINILPYREGSTKTGAALNFTRENMFSKSAGGRK
DQGVQQLAIVITSRKSQDDVGTAAAALRRTGVTVYAVGVKDADHNELNQIASYPARNHVY
EADSLAQLEKSLQKLLCNNILQRAFAASAINFNLKTGCVQTEQADFYFLIDHSSSIYPSG
FQDLKKFILEFMKMFRIGPNQVRVGVVKFSHYPMLEFGLTNYTSSSSLETAVKNISQLGG
DTEIGQALTFMGPQFKDASKTRGEKVPKYLIVITDGKSSDSVEQPAKELRDQGVITYAIG
VRGNDGADEDELQQIAGSPERKFFINDFDALKPIKDEIVTDICSKEVCKDVEGDVLFLID
GSGSISNDEFQKMMKFIWSLLNKSEIGPDKLQCGVLQFSDTQQEVFPLNKFYDKKSIEQT
ISSIQQLGGGTLTGAALSFASNYFDSPKGGRLNVKQFLIVITDGEAQDEVAKPAEELRNK
GVIIYSIGVLSANNSQLREISGTQERVFSERNFDALQHLEEQIHYKICHPEADCKRIEFA
DVIFLVDGSSSIQPSDFQSMIKFMTSIVNNTEVGENSTRFGIIYSDKPKTNFTLNQYYTK
REVQRAVAALEPPGGNTYTALGLQHSLALFEPQYGGRAAEKVPQILMVITDGVATDGVDL
RERSRAVREKGIKIYGIGVAKAKEKELEVMTADPKNVFYVDSYQGLEVLFKNLSKVLCAE
TKRVCQKQKADLVILMDGSSSIGEADFNMMKTFMSDLTGTFQVSQENVRVGMAQFSTKPH
ESFYLNQYNNVKDVKDSILAIKQVFGGTQIGKALYFMKRFFQSSTGSRIAQKVSQNLVVI
TDGESEDDVEHAAKELRSMGINLFVIGVGGIHKFHDLLQKIAGSQDRFFTAQNFAGLEKI
KENVVDTVCNPPVGPPDICSVDIGIGFDISRRPRADLLFNGQRKLKAYLHDIIRYSSSLD
ELCCTEGKSIKPNIGFLVAGEDGRVIDDYGFEWYNEQVVQKVMALQTSEPTFFNVQLLQA
FSTKFKKQSRAGVKILIIFTDGFDDIIEKLEAESDRLRREGIQALLLVGLEGVRNPSDLQ
MVEFGRGFGYKQPLSIGMQNVASVMLKKIETVVERECCGVMCKCSGQEGVRGPRGVPGGK
GLPGSKGYLGFPGEEGVIGERGPPGLNGTQGLQGCSGKRGIKGSRGYMGNKGEDGDNALD
GIHGEQGMTGLPGALGERGSPGSPGQRGIRGEPGNRGQPGLRGDPGEPGEDNTVRGLKGE
KGNPGMQGDAGDDGPPGENGIPGYRGAQGRRGPPGDEGEKGKPGQLGLPGSPGPSGPQGV
SGPKGLPGPFGTLGLPGPQGKPGPAGDKGLPGSHGFKGQKGQPGDTGEKGAVGPLGPRGM
PGLDGRDGYGLPGPKGLKGEPGFPGYPGLQGEGGFPGGNGGQGLKGNRGRRGNSGRPGEP
GELGASGPPGHPGPRGPAGTRSKSACQLVNYIRDNCVCCLGRTECPAYPTELVIALDMSE
DVSPPIFERMRRVVLTLLEDMSIAESNCPTGARVAVLSYSSNTKYLIRFSDYHRKRHLME
AVKNIPLERTSNRRNIGAAMRFVARNVFKRVRQGVLMRKVAVFFTNGLSQDMAAITTAVL
EFKALDITPAVLAFRNPPNVRRAFEADETRSFLLTVMRRPQDLGSDLRQVQQCVICYDPC
SPAEACRGINLVPVPQELNIDLALVVDSSRNMQADQYGDIKQLLGTVLDQIVVSTQPGGP
NKKARVALVQHSTSSYPPREGQVPVKVEFDLLGYKDRNKMKTHIFQAMQQIGGASGLGHA
IEWTIQNIMLKAANPRETMMVLAIIGGETSHWDTAKLHTIAQQAKCRGVVVFILTVGDEL
NYAQFEELASFPLEQHIVHLGHMKHGEQEYAQRFLRSFLHMLRRGINTYPSATLKKQCEN
VPLLTGQGEALEGQAIDRIPVPSIPVLEEGKVEYIDWTEEPQVDFTPTVVEESESQPSPG
SGDEAVCSLQQDEGSCGNYTLKWYFDVKQNECSRFWYGGCGGNDNRFETQEACEVLCLRV
R
NT seq
8106 nt
NT seq
+upstream
nt +downstream
nt
atgggggcaataaggacacttgtggctgttctcatcttggcatcttgtctttacagcagt
ggtgcccagaaaacagtgtgcacccaggaggcagtggctgacattgtgttcctggtggac
ggctcctggagcattggcacagagaacttccagcggattcgtgccttcctggtctcattg
gtagacagctttggtgtgggcccggaccaggttcggataggtctggttcaatacagcacc
aaacctgtcaccgagttccttctgaatgcctacacagacaagcaggagattctgcagcac
attcagaacctgccctacaggggcggtggcaccaagaccgggctgggcctggagttcatg
ctttcccatcactttgcagagaggtttggcagccgggccaatgagggggtcccacagttt
gcagtggtcataacagacggacagtcccaggacaacgttaagcagccagcagagatggtg
aagagacgtggcatcacactgtatgctatcggtatcaaagatgcagtgctggaggagctg
caagagattgccagtgacccagatgataagcatgtctacagtgtgtctgactttgctgct
ctgcaaggcatctcccagagtgtcattcaggtgctctgcaccacagtggaagaagccaag
cgtcagattgctcagatgtccctggagtgtagaaaggccaccatggcagacattgtgttt
cttgtggatagctcctcaagcattggccctgataatttccagcaaattaggctttttctt
catgactttgtggatggcctcgatgtgggaattaacaaagtgcgtataggactggcccag
ttcagcagtgagcctcaccaggagtttctcctgggagagcaaatggagaaaagggttctc
ttggagcagatagacaaattgaaatacaggacggggggcacccaaacaggaaaagccctc
cagtttctccagtctacctacttcactgaggctgggggtagccgggccagtgagaatgtc
ccacagatcgctgtggtgatcacagatgggagctccactgatgatgttgaggctcctgct
cagaagctcaggaagcaaggtgtcatcatcttcgccattggaattggggatgccaacaga
gaactccagaagatcgccaacagcccacaccagcacttccttatcagcattgatagcttt
caagcactgcagcgggtgactcagagttttctgcagacagtatgtactggtgtggaagta
cagatacaagcattagctccaagatttgctgatgtgttcatcctggtggacagcacagct
gagatgggaaaggtgagaatcctcctgaatcaaacggtcaaccagttgaatgttggcagt
gaggcacatcggatcggcttggctcagttcggctctgacactaaggtggagttcctgctg
aacaagtatcggaccaaagacgaagttctgcttcatttgaagaaccagttccgactgcgg
cctgggaaggaccgtcagttagggcgggccctggaacatgctcgtgtcaatttcttcaac
gcagctgctggcagccggattgctgaaggtttcccgcagttcctggtggtcatcaccgct
gggcagtcacaggacagtgtgataagggctgcacaatcaatcaagactgagggggtgacc
gtcatctccattggactgcctaaaaccaacagacaggagctggagctcattgctacatca
ccctatgtgttccagacatcaacaaaaagtattgcattgatatctgaggaggtgaaaggt
ataattgaatctaaggacttgacactgccaacagggccttcagattgcaggtcagtcaga
atggctgatattgttttcattgtggagcaatctggcagcaaggctaatttccagcaagtt
cgcaacttcatctatcgcattgtagatggtctcgatgttagcttcaagaaagtgagggtg
ggtatcgtattgtacaacaatgctccaaaagcaatggtctacctgaacagcattaaggag
aaggctgatgtcctgcagttcattaacatcctgccataccgagaggggagtactaagact
ggcgctgccttgaactttacccgtgaaaacatgttcagcaagagtgcggggggccggaag
gaccagggggtgcagcagctggccatcgtcatcaccagcaggaagtcccaggatgatgtt
ggaacagctgcggcggcactgcgccgcacaggggtcactgtatatgctgttggggtgaag
gatgctgaccataacgaactgaaccagatcgcctcctatcctgccaggaaccacgtctac
gaggccgacagccttgctcaactggagaagagccttcagaagcttttgtgtaacaacatc
cttcaaagagcctttgctgcttctgccataaatttcaatctgaaaacaggctgtgttcag
acggagcaagcagacttttacttcttgatcgaccactcttcgagcatctatccaagtggc
ttccaggacctgaaaaagttcatcctagagtttatgaaaatgttcaggattgggccaaac
caggttcgggtgggagtagtgaaattttcacattaccctatgctggaatttggtctgaca
aactacaccagcagcagttcgttggagacagctgtgaaaaacatcagtcagttgggtggg
gatacagagattgggcaagcactgaccttcatgggcccacagtttaaggatgcctccaag
acccggggcgagaaggtgcccaagtatctcatcgtcatcactgatgggaagtccagtgac
agcgttgagcagccagcaaaagagctgcgtgatcagggtgttatcacctatgccattggg
gtgaggggtaacgatggtgctgacgaggatgagctgcagcagattgctggctctccagag
aggaaattctttatcaatgactttgatgctctgaaacccatcaaagatgaaattgtcaca
gacatctgcagcaaagaggtttgcaaggatgtggaaggagatgtcttgttcttgattgat
ggttcaggcagcatctccaacgacgagttccagaagatgatgaagttcatatggtctcta
ttaaacaagtctgaaataggtccagacaaactccaatgtggtgtcttgcagtttagtgac
acacagcaagaggtgtttcccctgaacaagttctatgataaaaagagcattgaacagact
attagctccattcagcagttgggtggaggaactctcacaggagctgcactgtctttcgcc
tcaaattactttgactcacccaaaggagggcgtttgaatgtcaagcagttcttgattgtg
atcactgatggcgaggcccaagatgaagtagccaagccagctgaagagctgagaaacaaa
ggcgtgatcatctactcaattggagttctcagtgccaacaactcccaattgcgggagatc
agtgggacccaggaaagggtgttctctgagaggaactttgatgcactccaacatttagaa
gaacaaattcactataagatttgccaccctgaggctgactgcaagaggatagagtttgca
gatgtgatcttcctagtggatggttcaagcagcatccagccaagtgatttccagagcatg
ataaaattcatgacatcaatagtgaataacacagaggttggggaaaacagtaccaggttt
ggaattatttactcggacaaacccaaaaccaattttacattgaaccagtactacaccaag
agagaagttcaaagagctgttgctgccctggaaccgcctggcggtaacacctacacagcc
ttgggcctgcagcactcgctggccttatttgaaccacagtacggtggccgtgctgctgaa
aaggttcctcagatcctgatggtgatcacagatggggtggccacagatggagtggacctt
cgcgagaggtccagggcagtgagagagaagggcatcaagatttatggcattggagtggcg
aaagctaaggagaaggaactggaagtcatgacggcggatccaaagaacgtgttctatgtg
gacagctatcaaggcctggaagtgctcttcaaaaacctctccaaagtgctgtgtgctgaa
acgaaacgagtgtgtcagaagcagaaggctgatctggtgatacttatggatggatccagc
agcattggggaagctgattttaacatgatgaagacatttatgtcagacctgactggcact
ttccaagtaagccaggaaaatgtgagagtagggatggcccagttcagcacgaaaccccat
gaaagcttttatcttaaccagtacaacaatgtaaaagatgtcaaggacagtatcctggcc
attaagcaagttttcgggggcacgcagatcggcaaagctttgtactttatgaagcggttc
tttcaatcctccactgggagccggattgcccagaaagtctctcagaacttggtggtgatc
acagatggtgagtccgaagatgatgtggagcatgcagccaaggaattaaggtccatgggc
ataaacctgtttgtcatcggcgtgggtgggatccataaattccatgatttgctgcagaaa
atcgctgggtcccaggacaggttcttcactgcccaaaactttgccggtttggagaagatc
aaggagaatgtggtggacaccgtatgcaatccacccgttggccccccagatatttgctct
gtggacattggaattggatttgacatctcccggaggccgcgagctgatctgctcttcaat
ggtcagcggaagttgaaggcatacttgcatgacatcatccgttattcatcctccctggat
gaactctgctgcactgaaggcaaaagcatcaagcccaacattggcttcctggtggctggc
gaagatgggagggtcattgatgattacgggtttgaatggtataatgagcaggtggttcag
aaggtgatggccctgcagacctctgagccaaccttctttaatgtgcagctgctgcaggcc
ttctctacaaagttcaaaaaacagtcccgtgccggagtgaagatcctgataatattcaca
gatggatttgatgacatcattgaaaagctagaggcagaatcagaccgcctcagaagagaa
ggaattcaagcattgctgttagtgggtctggagggtgtccggaaccccagcgatcttcag
atggttgaatttggaagaggttttggctacaagcagcccctgtccatcggcatgcagaat
gttgccagtgtcatgttaaagaaaatcgaaactgtagtagaacgggaatgctgtggggtg
atgtgtaagtgttctggtcaggagggggtccgtggtcccaggggggtgccagggggaaag
ggcctgccaggttcaaagggttaccttggattcccaggagaagaaggagtgattggggag
agaggtccaccaggattgaatggaacacaagggttacagggctgttctgggaaaagagga
atcaagggatcgagaggctacatgggcaataaaggagaagatggggataacgcactggat
gggatccatggagagcagggtatgactggattgccaggtgccctcggagagagaggaagt
ccaggaagcccaggccagaggggcatccgaggggaacctgggaacagaggtcagcccggt
ctgagaggtgaccctggggagcctggtgaagataacacagtacgtggcctgaagggtgaa
aaaggaaacccaggcatgcagggagatgcaggagatgatggccctcctggagaaaatggt
attccaggatatagaggtgctcaaggtagaagaggtccacctggagatgagggggagaag
ggaaagccgggacagctggggcttccagggagccctggacccagtggtccacagggcgtg
agtggacccaagggtctacctggaccattcggaactcttggtcttcctgggccacagggg
aaacctggtccagcaggagacaaaggattgcctggaagtcatggattcaaaggacaaaag
ggccagccaggagacactggagagaaaggagcagtcggacccttgggaccaagagggatg
ccgggccttgatggcagagatggttatggtttgcctggacccaaaggattaaagggagaa
ccaggcttcccaggttacccaggactccagggagagggtggattccctggaggaaatgga
ggtcaaggtctcaaaggaaaccgtggcagaagggggaactcaggcaggccaggtgaacca
ggagaacttggagcttcagggcctccaggacacccggggcccagaggaccagctggaacc
agatcaaagtctgcctgtcagctggtaaattatatcagggacaactgtgtttgctgcctt
ggtcggacagaatgtccggcttacccgacagagctggtgattgccctggacatgtcagaa
gatgtgtctcctccgatctttgaaagaatgcgcagagtggtcctcaccctgctagaggac
atgtcgattgctgagagtaactgccccacaggggcccgtgtagccgtcctgtcctacagc
tccaacaccaagtaccttatccgcttctctgactaccaccgcaagcgccacctcatggag
gcagtgaaaaacatccccctggagaggacctctaaccgcagaaacattggggcagccatg
aggttcgtggcccggaacgtgttcaagcgggtccgccaaggggtgctgatgaggaaggta
gcggtcttcttcaccaacgggctgtctcaggacatggctgcaatcaccacagcagtgctg
gagttcaaggccctcgacatcacccccgcagtcctcgctttcagaaaccctcccaatgtc
cgccgtgcttttgaggctgatgaaaccaggagctttttgctcactgtcatgaggagacca
caggatctgggttctgacctgaggcaggtgcagcagtgtgtcatctgctacgacccttgc
agccctgctgaggcctgcaggggcatcaacttggtaccggtgcctcaggagttgaacata
gacctggcattggtggtggacagctctcgcaacatgcaggcggaccagtatggggacata
aagcagctgctgggcactgtgctggaccagattgtggttagcactcagcctggtgggccc
aacaagaaagccagggtagcgctggtgcagcacagcacatccagctacccccccagggaa
ggccaggtgccagtaaaggtggagtttgacctcttgggctacaaggaccgcaacaaaatg
aagacacatatcttccaggctatgcaacagatcgggggtgcttcagggctaggccatgcc
atagagtggaccatacagaacatcatgctgaaggctgccaatcctcgcgaaaccatgatg
gtcttagccatcattggaggggagaccagccactgggacacagctaagctgcacaccata
gcccagcaagctaagtgtcggggtgtggtggttttcatcctcactgttggtgatgaattg
aactacgcacaatttgaggagctagcaagcttcccgctggagcagcacatagtccacctg
ggtcacatgaagcacggtgaacaagagtatgctcaaagattcctcagaagctttctgcac
atgttgagaagaggaataaatacatatccctcagccacccttaaaaagcaatgtgagaat
gtaccgctgctgactggccagggagaagcactggaaggccaggccattgacaggatccca
gtgcccagtattcctgtcctagaggaaggcaaggtggagtacattgattggacagaagaa
ccacaagtggacttcactcccaccgttgtggaggaatccgaaagccagccaagcccaggg
agcggagatgaggctgtgtgttctctacagcaggatgaaggcagctgtggaaactacacc
ctcaaatggtacttcgacgtgaagcagaatgagtgctcccgcttctggtatggcgggtgt
ggtgggaacgacaataggtttgaaactcaagaggcgtgtgaggtactctgtctgagagta
cgataa
DBGET
integrated database retrieval system
