Anguilla anguilla (European eel): 118226833
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Entry
118226833 CDS
T07545
Symbol
cnot1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118226833 (cnot1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aang03019
]
118226833 (cnot1)
Messenger RNA biogenesis [BR:
aang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118226833 (cnot1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
118226833 (cnot1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
118226833
NCBI-ProteinID:
XP_035272663
LinkDB
All DBs
Position
5:complement(59949816..59985059)
Genome browser
AA seq
2416 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLCYAIDNPLHYQKSLKPSPHLFTQLSKVLK
LSKVQEVIFGLALLNSSSVDLRGFAGQFVKQKLPDLLRSYVDSDLGGNQEGGFQDIAIEV
LHLLLSHLLFGQKGACGVGQEQIDAFLKTLCRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGLAKNMMESSLAEFMQEVGYGFCASLDECRNIIRQYGVREVTASQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSEGSQTHTWNVEVLIDIVKEVNPNLNFKEVTYE
LDHPGFVIRDSKGLQIVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLMSPEMFC
FADYPCHTVAIDILKAPPEDDNREIATWKSLDLVESLLRLSEVGQYEQVKQLFSFPIKHC
PDMLVLALLQISTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
SMAEWYMRGEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACVTFLKRRCPSIMGGLAPEKDQPKSAQLPPETLATMLACLQSCAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRAPSTSSLDAISPVQVSVSPLQIDP
LTAMGTLTLGGSATSHTQSMPGFPTPLASAFSNPQSPAKVFPTLSNPTPSTPFGGLGSLS
SQLPGPLGSGSLSGIGSGLGMPAVSSDPFVTRKMSTPGLNPTTFQQTDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNVKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPYGTKMYYFGIAALDR
FKNRLKDYPQYCQHLASIPHFLQFPHHLQECVQYIEYGQQSRDPPVKMQGSITTPGSLAL
AQAQSQAPQKAPLPGQVSTMVTTSTTTTVAKTTTITRPTTVSFKKDVPVSIGNAREVGPS
INTTNIDTLLVATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPW
VSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFVKMVLNETYRNIKVLLTSDKAAANFSDR
SLLKNLGHWLGMITLAKNKPILYTDLEVKSLLLEAYVKGQQELLYVVPFVAKVLESSLRS
MIFRPQNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLSLDINDLKPGNLLKDKEKL
KSLDEQLSAPKKEAKPPEEMLPIVPPGDCLPFATAPPTPATTTACTATGPPTPQFSYHDI
NVYALAGLAPHININVNIPLLQAHPQLKQCVRQSIERAVQELVHPVVDRSIKIAMTTCEQ
IVRKDFALDSEESRMRVAAHHMMRNLTAGMAMITCREPLLMSIATNLKSSFAGALRAPTP
QQREMMEEAAARIAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCD
PVVLTYQAERMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPSNDLSQPTGFLAQPMKQQ
AWAADDVAQIYDKCMGELEQHLHAIPPALAMNPQTQALRSLLESVALARNSRDGIAALGL
LQKAVEGLLDATSGADADLLLRYRECHLLVLKALQDGRAYGPQWCNKQITRCLIECRDEY
KYNVEAVELLIRNHLVNMQQYDLHLAQSMENGLHYMAVAFAMQLVKLLLVDERSVSHITE
SDLFHTIETLMRTSTHSRANAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASE
YDDPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRL
CTEMCVEISYRAQAEQQHNPAASAAIIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKIN
LLNKVLGIVVGVLIQDHDVRQTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCN
TFHILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRN
VELNKHMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMR
LPDPFTPNLKVDMLSEINIAPRILTNFTGVMPSQFKKDLDSYLKTRSPVTFLSELRSNLQ
VGGTILGPWKHLQQSDTSIDQVSNEPGNRYNIQLINALVLYVGTQAIAHIHNKGSTPSMS
TITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAI
QEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNHDFVHCAPEIEKLFQSVAQCC
MGQKQAQQVMEGTSAS
NT seq
7251 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggctttgtctcaaatcagctacctggttgacaattta
actaagaaaaattacagagccagccagcaggaaatacaacatattgtgaatcgacacggc
cccgaggcagacaggcatttgttacgctgtctcttctcccatgtggatttcagtggcgat
ggtaaaagcagcggcaaagactttcatcagacacagtttctgatccaggagtgcgcgtcg
ctgatcaccaagccaaactttatctcgacgctctgctacgccatcgacaatcctttacac
tatcagaagagtttgaagccgtcaccccatttgtttactcagttgagtaaagtgctgaaa
ttgagcaaggtccaggaggtgatttttggccttgccctgctgaactcctccagcgtagac
ctgagagggtttgccggccagtttgtgaaacagaagcttccggacctcctgcgttcttac
gtggactcggacctcggggggaaccaggaaggtggcttccaagatattgccatagaggtc
ctgcacctgctcctctcccacctcctctttgggcagaagggagcttgtggggttggacag
gaacagatcgacgcgttcctcaagaccctgtgcagagatttcccgcaagagcgctgtccc
gtggtgctcgcaccactgctgtaccctgaaaaacgggacattctgatggacaggatcctg
ccagactctggggggttagccaagaacatgatggagagctcgctcgctgagttcatgcag
gaagtgggctacggcttctgtgcaagtctcgacgagtgccgtaatataatccggcagtat
ggcgtgcgggaggtcactgccagtcaggtggcgcgggtgctgggcatgatggcgcgcacc
cattcgggcctgaccgatgggattcccctgcagtccatctccgctccgggcagtgggatc
tggagcgacgggaaggataagagcgaaggctcccagacccacacctggaatgtggaagtt
ctgattgacattgtcaaggaagtcaaccccaatctgaacttcaaagaggtgacctacgag
ctggaccacccggggttcgtcatccgcgacagcaaagggctgcagatcgtggtgtacggc
atccagaggggcctgggtatggaggtgttccccgtcgacctcatctacaggccctggaag
cacgccgagggacagttgtcgttcatccagcattccctgatgagcccggagatgttctgc
tttgcggactacccctgccacaccgtcgccatcgacatcctgaaggctccccccgaagac
gacaaccgggaaatcgctacctggaagagcctggacctggtggagagtctgctccgcctc
tcggaggtggggcagtacgagcaggtgaagcagctcttcagcttccccatcaagcactgc
ccggacatgctggtgctggcgctgctgcagatcagcacctcctggcacaccctgcgccac
gagctcatctccaccctcatgcccatcttcctgggcaaccaccccaactccgccatcatc
ctgcactacgcatggcacggacagggacagtctccttccatccggcagctgatcatgcac
tcgatggcggagtggtacatgagaggggaacagtatgaccaggccaagctctcccgcatc
ctggatgtggctcaggacttgaagtctctatctatgctgctaaacggcactccattcgcc
ttcgttattgaccttgctgcacttgcgtctcgacgtgaatacctcaaacttgacaagtgg
ctcactgacaagatcagagagcacggggagcccttcatccaggcctgtgtgaccttcctg
aagaggcgctgtccctccatcatggggggcttggccccggagaaggaccagcccaaaagc
gcccagcttcccccggagacgctggctaccatgctggcgtgtctgcagtcctgcgcgggg
agtgtctctcaggagctgtccgagaccatcctgaccatggtggcgaactgcagcaacgtg
atgaacaaggcgcggcagccccctccgggcgtgatgcccaagggccgcgcccccagcacc
agcagcctcgacgccatttcccccgtccaggtatcggtgtcccctctgcagatcgacccc
ctgacagccatgggcaccctgacgctgggcggctcagccacctcccacacgcagagcatg
cccggcttccccacgcccctggcctccgccttcagcaacccccagtctccggccaaggtg
ttccccaccctgtccaaccccaccccctccaccccgttcggagggctggggagcctgtcc
tcccagctgccaggtccgttgggcagcggcagcttgtccggcatcgggtcgggtctgggg
atgccggccgtgagcagcgaccccttcgtcacgaggaagatgagcaccccgggcttgaac
cccaccaccttccagcagactgacctttctcaggtgtggcctgaggcaaaccagcacttt
agcaaggagatcgacgacgaggccaacagctacttccagcgcatctacaaccacccgcca
caccccaccatgtctgtcgatgaggtgctggagatgctccagcggttcaaggactccaac
gtgaagcgggagcgcgaggtgttcaactgcatgctgcgcaacctgttcgaggagtaccgc
ttcttcccccagtacccggacaaggagctgcacatcaccgcctgcctgttcggcggcatc
atcgagaagggcctggtcacgtacatggcgctaggcctggccctgcgctacgttctggag
gccctgaggaagccttatggcaccaaaatgtactacttcggcatcgctgcactagatagg
tttaagaatagactgaaggactatccccagtactgtcagcacttggcttccattccacac
ttcctgcagttccctcaccatttacaggagtgtgtgcagtatatcgagtacggccagcag
tcacgagaccccccagtgaagatgcaaggatccatcaccaccccgggcagcctggccctc
gcccaggcccagtcgcaggcgccccaaaaagcccccctcccgggacaggtcagcaccatg
gtaaccacatccaccacaaccactgttgccaaaaccactaccattacccgccccaccacc
gtcagcttcaagaaggacgttccagtgagtatcggtaacgccagggaagtcgggccctct
attaatacgacaaacatcgacacccttttggtggcgacagaccaaactgagaggattgtt
gagcctccagagaacgtccaagagaagatagcgttcattttcaacaatctgtctcaatcc
aatatgacccagaaggtggaggagctgaaggagactgtgaaggaggagttcatgccctgg
gtctctcagtacctggtcatgaagcgggtcagcatcgaaccaaacttccacagcctctac
tccaacttcctggacacgctgaagaaccccgagtttgtcaaaatggtcctgaatgagacc
tacagaaatatcaaggttctgctgacatctgacaaggctgcggctaacttctctgaccga
tctctgctgaagaacctgggccactggctcggaatgatcactctggctaaaaacaagccc
atactgtacacggacctggaggtgaagtctctactgctggaggcttatgtcaaggggcag
caggagctgctctatgtcgtccccttcgttgccaaagtcttggaatccagtctgaggagc
atgatattcagaccccagaacccttggactatggccattatgaatgtactggcagagctg
catcaggaacatgatctgaagctcaatctgaagtttgagatcgaggtgctgtgcaagaac
ctgtcgctggacatcaatgacctgaagcccgggaacctgctgaaggacaaagagaagctg
aagagcctggacgagcagctgtccgcaccaaagaaagaggccaagccccccgaggagatg
ctgcccatcgtgcccccaggcgactgtcttccatttgctactgcgccccctacccccgcc
accaccaccgcctgcacagccaccggccctcccaccccccagttcagttaccatgacatc
aacgtctacgccctggctggcctggccccccacatcaacatcaacgtcaacatccccctg
ctgcaggcgcacccccagctgaagcagtgcgtgaggcagtccatcgagcgggccgtgcag
gagctggtgcaccccgtggtggaccgctccatcaagatcgccatgacgacctgcgagcag
atcgtgcgcaaggactttgcgctggactcggaggagtcgcgcatgcgcgtggcggcgcat
cacatgatgcgcaacctgaccgccggcatggccatgatcacctgccgcgagccgctgctc
atgagcatcgccaccaacctgaagagcagcttcgccggcgccctgcgggcccccaccccc
cagcagagggagatgatggaggaggctgccgcccgtatcgcccaggacaactgtgagctg
gcctgctgcttcatccagaagactgctgtggagaaggctggccccgagatggacaagaga
ctggccaccgagtttgagctgaggaagcacgctcggcaggaaggccggcgctactgtgac
ccggtggtgctgacgtaccaggccgagcgcatgccggagcagatcaggctaaaggtcggt
ggtgtggaccctaaacagctggctgtttatgaggaatttgctcgcaacgttcccgggttt
ttacccagcaacgacctgtcccagcccaccgggttcctcgctcagcccatgaagcaacag
gcctgggcggcggacgacgtggcgcagatctacgacaagtgcatgggggagctggagcag
cacctgcacgccatcccccccgccctggccatgaacccccagacccaggcgctgcgcagc
ctgctggagtccgtggcgctggcccgaaactcccgcgacggcatcgccgcgctcggcctg
ctccagaaggctgtggagggcctgctggacgccaccagcggtgcggacgctgacctgctg
ctgcgctatcgggagtgccacctgctggtgctcaaggccctgcaggacggccgggcctac
gggcctcagtggtgcaacaagcagatcacgcggtgcctgatcgagtgccgtgatgagtac
aagtacaacgtggaggccgtggagctgctgatccggaaccacctggtgaacatgcagcag
tatgacctgcacctggcacagtcgatggagaacgggctgcactacatggcggtggccttc
gccatgcagctggtgaagctgctgctggtggacgagcgcagcgtgagccacatcacggag
tccgacctgttccacaccatcgagacgctcatgaggaccagcacccactccagagccaac
gcccccgaggggcttccccagctgatggaggtggtgcgctccaactacgaggccatgatc
gaccgggcccacggggggcccaacttcatgatgcattctgggatctcccaggcgtcggag
tacgacgacccgccggggctgagggagaaggccgagtacctgctgagggagtgggtcaac
ctgtaccactccgccgccgccggccgcgacagcaccaaggccttctccgccttcgtggga
cagatgcaccagcaggggatcctgaagaccgatgacctcatcacgcgcttcttccgcctg
tgcacggagatgtgcgtggagatcagctaccgggcgcaggccgagcagcagcacaacccg
gccgccagcgccgccatcatccgcgccaagtgctaccacaacctggacgccttcgtgcgg
ctcatcgccctgctggtcaagcactccggcgaggccaccaacaccgtcaccaagatcaac
ctgctcaacaaggtcctgggcatcgtggtgggcgttctgatccaggaccacgacgtgcgg
cagacggagttccagcagctgccgtaccaccgaatcttcatcatgctgctgctggagctc
aacgcccccgagcacgtgctggagaccatcaacttccagaccctcactgccttctgcaac
acgttccacatcctgcggcccaccaaagcgccggggttcgtgtacgcctggctggagctg
atctcccaccgcatcttcatcgcccggatgctggcgcacaccccgcagcagaagggctgg
cccatgtacgcccagctgctgatcgacctcttcaagtacctggcccccttcctgaggaac
gtagagctcaacaagcacatgcagatcctctacaagggcacgctgcgtgtgctgctggtg
ctgctgcacgacttcccagagttcctgtgcgactaccactacggcttctgcgacgtcatc
ccgcccaactgcatccagctgcgcaacctgatcctcagcgccttcccccgcaacatgagg
ctgcccgaccccttcacccccaacctgaaggtggacatgctgagcgaaatcaacatcgcc
cctcgcatcctcaccaacttcaccggggtgatgccgtctcagtttaagaaggatctggac
tcttacctaaagactcgttcccctgtcacctttctgtccgagctgcgcagcaacctgcag
gtagggggcaccattctgggtccctggaaacatttgcagcaaagtgacacatctatagac
caggtgtcgaacgagccggggaaccggtacaacatccagctgatcaacgcgctggtgctg
tacgtgggcactcaggccatcgcgcacatccacaacaagggcagcaccccctccatgagc
accatcacccactcggcccacatggacatcttccagaacctggccgtggacctggacaca
gaggggcggtacctgttccttaatgcgatagccaatcagctgcggtatccaaacagccac
acccactacttcagctgcactatgctttacctgtttgccgaagccaatacagaagccatt
caagagcagatcactcgggtgctgctggagaggctgatcgtgaacaggccacacccctgg
ggtctcctcatcaccttcatcgagctcatcaagaaccccgccttcaagttctggaaccac
gactttgtgcactgcgcaccggagatagagaagttgttccagtcggtggctcagtgctgt
atggggcagaaacaagcacagcaggtgatggagggcaccagcgccagctaa
DBGET
integrated database retrieval system
