Argentina anserina (silverweed cinquefoil): 126786649
Help
Entry
126786649 CDS
T10558
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans00040
Pentose and glucuronate interconversions
aans01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
126786649
Enzymes [BR:
aans01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
126786649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
126786649
NCBI-ProteinID:
XP_050368498
LinkDB
All DBs
Position
3:709483..710973
Genome browser
AA seq
386 aa
AA seq
DB search
MADNITLLLLLLCLLAYNAPTLEAAYSPSYSYKPKPVTKNVVDSCWRSNPNWARNRQALA
NCAVGFGKDAIGGKYGRIYVVTTSFDDPINPKPGTLRYGVIQTQPLWIVFAKDMVITLKN
ELIMNSFKTIDGRGAKVEIAYGPCITVQGVSHVIIHGIGIHDCKPGKSGMVRSTPTHVGR
RRGCDGDSINIFASSHVWVDHCYLARGADGLIDITHASTAVTVSNNYFSQHDKVMLLGHN
DKFTADKIMKVTIAFNRFGAGLIERMPRVRFGYAHVANNRYDEWKMYAIGGSANPTIFSE
GNYFIAPTNHDAKEVTKREAYGGWKNWKWRSSNDVLQNGAYFIQSGWGSCYPAYTRTQKF
KVSPGSMVPALTSNAGPLLCIVGKAC
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaacataacccttctcctactgcttctttgtttactagcctacaatgctcca
acactagaagcagcatattccccaagctactcctacaaacccaaacccgtaacaaagaat
gtagtcgactcatgctggcgcagcaatcccaattgggcaagaaatcgccaagccttggct
aactgcgcagtagggttcggcaaagatgctattggaggcaaatatgggcgtatttacgta
gtcaccacttcgtttgatgaccccataaaccctaaaccgggcaccctccgatacggtgtg
atccaaacacaaccgttgtggatcgtctttgccaaagacatggttatcaccctaaaaaat
gagctcattatgaatagtttcaagactatagacggtagaggggctaaagtagagattgca
tatggaccatgcataactgttcagggtgttagccatgttatcatccatggaataggtatt
catgattgtaagccggggaagtccggcatggttaggagcactcctacacatgtcggacgt
cgtcgagggtgcgatggtgattccattaatatctttgcttcttcgcatgtttgggttgac
cattgctatttagctcgtggggcagacggcctcattgatatcacccatgcttccacggca
gtcaccgtcagtaacaactatttctcccagcacgacaaggtgatgctgcttggacacaat
gataaatttactgcagataagattatgaaggtcacaatagcctttaaccgatttggggcc
ggccttattgaaaggatgccaagggtcagattcgggtatgcgcatgtcgccaacaacaga
tacgatgagtggaagatgtacgccattggtggcagtgctaatccaaccattttcagtgaa
ggcaactacttcatagctcctacaaatcatgatgccaaagaggtcacaaagagagaagcc
tatgggggatggaagaactggaaatggagatcttcaaatgatgttttacaaaatggtgct
tattttattcaatctggatggggaagttgttatccagcgtacacacgaacacagaagttc
aaggtctctccaggatccatggttcctgctttgacttcaaatgcaggtcctctgctctgc
attgttggtaaagcatgttga
DBGET
integrated database retrieval system
