Argentina anserina (silverweed cinquefoil): 126795580
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Entry
126795580 CDS
T10558
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase subunit alpha-like
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126795580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aans03021
]
126795580
03400 DNA repair and recombination proteins [BR:
aans03400
]
126795580
Enzymes [BR:
aans01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126795580
Transcription machinery [BR:
aans03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
126795580
DNA repair and recombination proteins [BR:
aans03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
126795580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
SAM_2
SAM_EPH
Motif
Other DBs
NCBI-GeneID:
126795580
NCBI-ProteinID:
XP_050378348
LinkDB
All DBs
Position
5:14914057..14914605
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AA seq
182 aa
AA seq
DB search
IERNRGYHINMANNFXDGSYHVDVVFMPTRNVNHSIHSYVNGNEKQEILFIKIWTNGSLT
PKEALHEDSRNLIDXFIPFSHAEEENFYFENNQHKVTLPLFTFHGKLANLRKSKKEITLK
YIFIDQLEFPPPPGVYNCLKRSNIHTLLDLLNNSQEDLMXKKLRIEDVKHILNILEIKKN
FK
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atcgagaggaatcgtggatatcatataaatatggccaataactttncagacggtagttat
catgtagatgttgtattcatgcccacccgaaatgtgaatcatagtattcattcttatgtg
aatgggaatgaaaaacaagagatactttttatcaaaatatggacaaatggaagtttaact
cctaaagaagcacttcatgaagactctcggaatttgattgattgatttattcccttttca
catgcagaagaagaaaacttctatttcgaaaacaatcaacacaaagttactttacccctt
tttacttttcatggtaaattggctaatctaagaaaaagtaaaaaagaaatcacattgaaa
tatatttttattgaccaattagaattcccccccccccccggggtctataattgcctcaaa
aggtccaacatacatacattattggaccttttaaataacagtcaagaagatcttatgnaa
aaaaaattgcgcatagaagatgtaaaacatatattaaatattctagaaataaaaaagaat
ttcaaataa
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